Desulfotomaculum nigrificans: Desca_2105
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Entry
Desca_2105 CDS
T01498
Name
(GenBank) Polyprenyl synthetase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
dca
Desulfotomaculum nigrificans
Pathway
dca00900
Terpenoid backbone biosynthesis
dca01100
Metabolic pathways
dca01110
Biosynthesis of secondary metabolites
Module
dca_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
dca00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Desca_2105
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
dca01006
]
Desca_2105
Enzymes [BR:
dca01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
Desca_2105
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
Desca_2105
2.5.1.29 geranylgeranyl diphosphate synthase
Desca_2105
Prenyltransferases [BR:
dca01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
Desca_2105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AEF94944
UniProt:
F6B9P8
LinkDB
All DBs
Position
complement(2229686..2230570)
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AA seq
294 aa
AA seq
DB search
MSYQDQLKSYALAVDKALNEYLPAAEVYPSTIHEAMRYSVFAGGKRLRPILTIAAAEAVG
GSMEQVMPVACALELIHTYSLVHDDLPAMDNDDFRRGRPTNHKVYGEAMAILVGDALLTQ
AFEVIAGTAVKVSPDKVNQVTLEIARAAGSLGLIGGQVVDTLSEDQVIDGQVLEYIHRHK
TGALFRVAVRAGAILSGASAEELAALTTYAEQMGLAFQIKDDLLDIEGDEAKIGKPVGSD
VKNKKATYPALYGLEKAREMAARAAAEAVAALEIFGPKAEFLRSIMHFIINRDH
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatcaagatcaattaaaaagttatgccctggcggtggacaaggctttaaatgaa
tacctgcctgcagcggaagtttacccgtccaccattcacgaagccatgcgttacagtgtt
tttgccggtggtaaaaggttaagaccaatattaaccatagcggcggcagaagctgtggga
ggcagcatggaacaggttatgccagtggcctgtgccctggaactgattcatacctattcc
ctggtacacgatgatttaccggccatggacaatgatgatttccgccggggacggcccacc
aatcacaaagtttatggcgaggcaatggctattctggtgggagatgccctattaacccag
gcctttgaagttattgccggtaccgctgtcaaggtaagcccggacaaagtgaatcaggta
accctggagattgcccgggccgccggttccctgggattaattggcgggcaagtggtggat
accctttcggaagatcaggtcattgacggtcaggtattggaatacatccatcggcataaa
accggcgcactatttagagtggccgtccgggccggtgccatcctgagcggcgcctcggcc
gaggaactggctgccttaactacctacgccgaacaaatgggtctggcttttcaaattaaa
gatgatttgttggatattgaaggagacgaagctaaaattggtaaacccgtcggcagtgac
gttaaaaataaaaaagccacctatcccgcattatacggtttagaaaaagccagagaaatg
gcagcccgggcagcggcagaagcggtggccgccctcgaaatttttggccccaaagcggaa
tttttacgatcaatcatgcattttattatcaatagagatcattaa
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