Desulfotomaculum nigrificans: Desca_2316
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Entry
Desca_2316 CDS
T01498
Name
(GenBank) transcriptional regulator, Crp/Fnr family
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
dca
Desulfotomaculum nigrificans
Pathway
dca02020
Two-component system
dca02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dca00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Desca_2316
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Desca_2316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dca03000
]
Desca_2316
Transcription factors [BR:
dca03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
Desca_2316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
HVO_A0261_N
HTH_24
HTH_3
HTH_IclR
TrmB
Phage_rep_O
DUF5610
YfeC-like
HTH_29
HTH_26
Motif
Other DBs
NCBI-ProteinID:
AEF95151
UniProt:
F6B3C0
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All DBs
Position
2433525..2434208
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AA seq
227 aa
AA seq
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MQSNLKYLQRIPLFYDLPEEQLQEIARLVLERSYTKGRIIFMEGEPGEALFLLKSGLIKL
TKRLEDGREHILHFVNPGEVFAEVVLFEGGNYPATAEVQEDAVVGVLRNQDIERLISHNP
SMAVGMLRIMSRRLRTAQEKVMNLALHDTARRLAFTLIKMAEEHGVKEARGTLINLSLTN
QELANMTGSSRETINRMLNSFKRAGAIDMDRQQIYLLDKGKLENLLR
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagtaatcttaaatatttacaaagaataccgcttttttatgatttaccagaggaa
caactacaggaaatagccaggttggtactggaaaggagttacaccaaggggcgcattatt
tttatggagggtgaacctggcgaagctctgtttttgctgaaatcgggcctgattaagtta
accaaaaggctagaggatggtagagaacatattttacattttgttaaccccggcgaggtc
tttgcggaagtggttctctttgaagggggaaattatccggccaccgcagaggtgcaggaa
gatgctgtggtaggggtgctgcgtaaccaagacattgaaaggctgattagccataacccc
agtatggccgtagggatgcttaggattatgtcccggcgattgaggacggcccaggaaaag
gtgatgaatctggcgttgcatgataccgcccgccgcctggcctttacgttaattaaaatg
gccgaggaacatggtgtaaaagaagcccgaggtactttaattaaccttagcctgaccaac
caagagctggccaatatgaccggcagttcccgggaaaccattaaccgcatgctgaacagc
tttaagcgagccggtgctattgatatggaccggcagcaaatttatttgctcgataaaggg
aagctggaaaatttattgaggtaa
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