Desulfotomaculum nigrificans: Desca_2409
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Entry
Desca_2409 CDS
T01498
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family
KO
K03093
RNA polymerase sigma-I factor
Organism
dca
Desulfotomaculum nigrificans
Brite
KEGG Orthology (KO) [BR:
dca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dca03021
]
Desca_2409
Transcription machinery [BR:
dca03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Desca_2409
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GFIT
Motif
Pfam:
Sigma70_r2
HTH_16
DUF3881
Sigma70_ECF
Pathogen_betaC1
Motif
Other DBs
NCBI-ProteinID:
AEF95238
UniProt:
F6B3S9
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Position
2534600..2535310
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AA seq
236 aa
AA seq
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MFSFTLNRLLQRAKNGDEGAREELIRKHRDFIARVSSRICKRFLCWENDDELSIALLAFN
EAIDSYHFDRRTSFSSFAYTVIHRRLTDYFRKNPAKYELLLSADQDDTEDIISSLLDRQA
QDTYRDQLQREKMAETIDLFRQRLSCYDITLEDLFNCSPRHQDTREKLMQAAMTVAHNPV
LLNHLENTQRLPAKQLVTITGLSHRVLEKWRKYIIATILILTDPHLSALKRFTKGF
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgtttagctttactctaaaccggttgctgcaaagggccaaaaacggtgatgaaggagcc
agagaagaacttatccgcaaacaccgggatttcattgccagggtcagttcccgcatatgc
aagcgctttttgtgctgggaaaatgacgatgagttgagcatcgctcttttagctttcaat
gaagccattgacagttatcactttgaccggcggacttccttctcttcctttgcctatacc
gtgattcatcggcggctgacggattatttccggaaaaacccggccaaatatgaactttta
ctgtctgcggaccaggacgacaccgaagacattatttcgagcctgctggaccggcaggcc
caggacacctaccgggatcaactgcagcgggaaaaaatggcagaaaccattgacttgttc
cggcagcggttaagctgctatgatattaccctggaggatttattcaactgcagccccagg
caccaggacacacgggagaagttgatgcaggcggccatgacggtagcccacaatccggtc
ttattgaatcatctggaaaatacccaaaggctgccggccaaacagttggtgaccataaca
ggcctaagccaccgggtgctggaaaagtggcgaaagtatattattgctaccattttgatt
ttgacagacccgcatctttcagcattaaagagattcaccaaaggattttaa
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