Desulfotomaculum nigrificans: Desca_2500
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Entry
Desca_2500 CDS
T01498
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
dca
Desulfotomaculum nigrificans
Brite
KEGG Orthology (KO) [BR:
dca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dca03000
]
Desca_2500
Transcription factors [BR:
dca03000
]
Prokaryotic type
Helix-turn-helix
Other families
Desca_2500
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
Mg_chelatase
HTH_8
HTH_50
AAA_2
AAA_5
AAA_16
TIP49
AAA
HTH_23
MCM
HTH_28
AAA_3
Motif
Other DBs
NCBI-ProteinID:
AEF95326
UniProt:
F6B4V4
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Position
2630387..2632105
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AA seq
572 aa
AA seq
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MINRTSIAGTVNHLLKLLPGHITVWHRGAILYATEPNPSNSLNHWPIVQAAREQHEAILI
SAPRQHQLCQECPRCSDCSLALELFIPFRLNQQMSGGICYQFTATAANLLQTNLNAWLEH
LKDYTRHIELLIEDATKRHRELLKTQQLTYLLNLVPEGVVLLDEHANITAYNEMANLHEL
TSLLQPLKHHNPASELPATLSLPNSAGEIQLKGKSFYYNKRFIGALYHTQKSAPLLKEKA
KPSKQTIMPSIIGNNPAIQKILDMIKQVARSDSTILLRGESGTGKELFAQAIHELSPRAH
KPFVAINCAAIPEHLLESELFGYEEGSFTGAKKGGKPGKIELANHGTLFLDEVGDMPLAL
QAKLLRVIQEKSIERVGGSHPIPINVRLVAATHRNLEEMIGQGTFREDLFFRLSVIPIFI
PPLRQRPEDIELLLNYFLRKYCISLRKPFKIFSYGSLQRLMSYSWPGNIRELENMVEYLV
NIHAQDVINAEDLPLNISRSSPAEEAPPTMRTMPLAAKPGHGSRSQRSRDELIELLNRYG
WDTAGKRETAAALGISLATLYRRLHKYKIKES
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaccgtacaagtatcgccggcacggtcaaccatttattaaagctgttgccgggc
cacatcacggtatggcaccggggggccattctttatgccacggaaccaaacccctctaac
agcctaaaccattggcccattgttcaagcagcccgggaacaacatgaagcgatactgatt
agcgctccccggcaacaccagctgtgccaggagtgcccccggtgtagtgattgctccctg
gccctggaattgttcatcccctttcgcctgaaccagcaaatgagcggcggtatttgctat
caatttaccgccaccgctgcgaacttactgcaaacgaatttaaacgcctggttggagcat
ttaaaggattacaccaggcacattgaactactgatagaggatgcaaccaagcgtcatcgc
gaattattaaagacccaacagttaacctacctgttaaacctggtgccagaaggagttgtg
ctgctggatgaacacgcaaatataacggcctacaatgaaatggctaatctacatgagcta
actagtttgctgcaaccgttaaaacaccataaccctgccagtgaattaccagctaccctc
tcgctgccaaattccgccggggaaatacaattaaagggtaaatccttttactataacaaa
cggtttattggcgccctgtaccacacccaaaaatcagcacccctgttgaaggaaaaagcc
aaacccagtaaacaaaccatcatgccgagcattattggtaataacccggcgatccaaaaa
atcctggatatgatcaagcaagtagccaggtccgattccactattttattgcggggagaa
agcggcaccggtaaagagctatttgcccaggccattcatgagcttagtccccgagcccat
aaaccctttgtggccattaactgtgccgccattcccgaacatttgctggaaagtgaattg
tttggttatgaggagggctcctttaccggagcaaagaagggtggtaaaccgggaaaaatt
gaactggccaatcatggtacgctatttttggacgaagtgggtgacatgccgctagcctta
caggctaaattactacgggtcattcaagaaaagagcattgaacgggtgggtggctcacat
cccatccccattaatgtgcgtttggtggctgccacccaccgcaatctggaagaaatgatt
ggtcaaggtaccttccgggaggatttattctttcgtttaagtgtaattcccatctttatt
cctcccttgcgccaaagacccgaggatatcgaactgctgctgaattatttcctacgtaaa
tattgtatttctttgcgcaagccctttaagattttctcctatgggtccctccaacggttg
atgtcctatagctggcctggcaatattcgcgaactggaaaatatggtggagtatctggtg
aatattcacgcccaggatgtaatcaatgcagaggatctcccccttaacattagccgcagc
agtccggccgaagaggcccccccaaccatgagaacaatgcctctggcagctaaaccaggt
catggttccagaagtcaaaggagccgggatgagttaatcgaactgttaaatcgttatggt
tgggacaccgcaggaaaaagggaaaccgccgccgccctgggtatcagcctggccaccctc
taccggcgccttcataaatacaaaattaaggagtcgtga
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