Desulfotomaculum nigrificans: Desca_2642
Help
Entry
Desca_2642 CDS
T01498
Name
(GenBank) Glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
dca
Desulfotomaculum nigrificans
Pathway
dca00260
Glycine, serine and threonine metabolism
dca00460
Cyanoamino acid metabolism
dca00630
Glyoxylate and dicarboxylate metabolism
dca00670
One carbon pool by folate
dca00680
Methane metabolism
dca01100
Metabolic pathways
dca01110
Biosynthesis of secondary metabolites
dca01120
Microbial metabolism in diverse environments
dca01200
Carbon metabolism
dca01230
Biosynthesis of amino acids
dca01240
Biosynthesis of cofactors
dca04981
Folate transport and metabolism
Module
dca_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
dca00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Desca_2642
09102 Energy metabolism
00680 Methane metabolism
Desca_2642
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Desca_2642
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Desca_2642
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Desca_2642
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Desca_2642
Enzymes [BR:
dca01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Desca_2642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AEF95460
UniProt:
F6B5M8
LinkDB
All DBs
Position
complement(2780374..2781612)
Genome browser
AA seq
412 aa
AA seq
DB search
MNKGTLIQSDPDLAKAIEKELARQRRNIELIASENFVSPAVLEAQGSVLTNKYAEGYPGK
RYYGGCEFVDMVESLAINRAKELFGADHVNVQPHSGAQANFAVYFALLNPGDKILGMNLA
HGGHLTHGSPVNVSGKYFNVVAYGVDEKTGRINYDRLRDIALTERPKMIVAGASAYPRAI
DFKRIGEIAREIGAYFFVDMAHIAGLVAAGLHQSPVPYADVVTTTTHKTLRGPRGGMILC
KEKYAQLIDKAIFPGSQGGPLMHVIAAKAAAFGEALKPEFKAYQQQIINNAQALAKGLIN
RGFNLVSGGTDNHLMLVDLRGTGITGKEAEKLLDEVNVTCNKNAIPFDPEKPFVTSGIRL
GTPAVTTRGFKEAEMDQVAEIISITLKGKDNPAAKEQARAMVKELCDKHPLY
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaggtacattaatccaatccgaccccgatctggctaaagccatagaaaaggaa
ctggcacgccagcgccgcaacattgaactgattgcctcggaaaactttgtcagcccggcc
gtgttagaagcccagggctcggtattgaccaacaagtatgccgaaggataccccggcaag
cgctactacggcggctgtgaatttgttgacatggtggaaagcctggccattaaccgggct
aaagaattgtttggggccgaccatgttaatgtgcagccccactcaggggcccaggctaac
tttgccgtctactttgccctgcttaaccccggcgacaaaatcctgggcatgaacctggcc
cacggcggtcacctgacccacggcagcccggtgaatgtctccggtaaatacttcaacgtg
gtagcctacggggtggatgaaaagaccggccgtatcaactatgacaggctgcgcgatatc
gcccttaccgaaagacccaagatgattgtggccggcgccagtgcctatccccgggccatt
gatttcaaaagaatcggggagatcgcccgggagatcggggcttacttctttgtagatatg
gcccacattgccggcctggtggctgccggtctgcaccagagcccggtaccctatgccgat
gtggtgaccaccaccacccataaaaccctgcggggtccccggggcggtatgatcctgtgc
aaagaaaaatatgcgcaattaattgataaggccattttccccggcagccagggcggtccc
ctgatgcacgtaattgccgccaaggccgcggcctttggcgaggccctgaagccggaattt
aaagcctaccagcaacaaatcatcaacaacgcccaggccctggccaaaggactgatcaac
cgcggctttaacctggtctccggcggcaccgataaccacctgatgctggtagacctgcgg
ggcaccggcatcaccggtaaagaagccgaaaagctgctggacgaagtaaacgtaacctgc
aacaaaaacgccatccccttcgacccggagaaacccttcgtcaccagcggcatcagactg
ggcaccccggccgtaaccacccgcggctttaaagaagcagagatggaccaggtggctgaa
atcatcagcatcaccttaaaaggcaaagacaacccggccgccaaagaacaagcccgggcc
atggtgaaggaactgtgcgataagcatccgctatactaa
DBGET
integrated database retrieval system
