Daphnia carinata: 130686844
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Entry
130686844 CDS
T11669
Name
(RefSeq) calsyntenin-1-like
Organism
dcar Daphnia carinata
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLSTN_C
Ig_CLSTN
Cadherin
Laminin_G_3
Laminin_G_2
Glyco_hydro_16
Herpes_capsid
TMEM51
Rhabdo_ncap
Motif
Other DBs
NCBI-GeneID:
130686844
NCBI-ProteinID:
XP_057365994
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Position
2:complement(2877772..2897134)
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AA seq
1004 aa
AA seq
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MARWPTLVVAVALALFAAVSTAETQVPRLDGTGKSGNSGYHGLVDEDKLIVDVTPKIRAV
GAEICAFRIVNKHHGETPFEIVVKDREKGEAELRAKKSLNCEKKKNYKFDIVAVSCAGIS
SENATVHISVNDVNEYAPKFNQPSYVVDVDEGRPADKIIQVEANDADCSAKYGDICRYDI
LNKDQPFAIDNEGVIRSIEPLDYEKNHNHILQVVAYDCGMKRSEPVLVSVKVNRVCRLGW
TGISERVEYVPGSGRQDLFPEAQINLCDFPCQPESIQARLTLASSHLGKNCDRDTYTVQN
QRKLCGANSRAIDLLPPPGPGAEWTRDLPVDQGREADQVFVFDGSTGVTVPPEVMAHNLT
RNFTMSVWLKHEHHAGQDKHVKEHILCNADDHQMNRHHFSLFIRNCRLILLLRREFGDGD
LKSFRPAEFRWKLPQVCDGQWHHYAVSMEFPEVQLYVDGRPMVASKNNPEIIDDWPLHNS
HGLNTTLTVGACWQGSQSRMQHFMRGSMAGLSVLAGQIELDEVIACLHKCKENLEAPPME
LLQPGMEILNNNDLTELTLEGENKTNLEVLLRKVAYANLRDFPTPGRRPLRLYTNIVCSS
GRTLKIPVLESAIVVQATPLPIVTVTGLSSSHYGYESLRSGVHLFPDARIEVSNADAAAA
QDSSSEEDESSEEEDLMMNIAQRVDSCTATVYPPLNPDHETLTWPQNLLSQFKIEAKFSH
DGVTLMGSESTNHYEQILHQLQYNNHKPAYYLTRAFKLICSQMSGRFASNELIHTVTVDH
PQASSFVDGSTSTPVVAASSTSGAASSSSLGHSTEPSTSAPQPPNQQTLSHQSKTAAPAH
AKVDRHHVDIRPVGPITAISDVYMGTGMGGTVQGHLSSGASHTVTIIVMVCAGFLLLMIS
LGVVRVRAARRRAQQDETTADTEMAWDDSALTITVNPMETLEAAEKSTMTRTSHRHDDSD
SEDDSCHGNDSSDEDPDDDDDDDDDDGGACKARDLEWDNSTLSI
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atggctcgctggccgacgctcgtcgttgctgtggccttggctttgttcgccgcagtgtcg
actgccgaaactcaagttccccgtttggatggaactggcaagagtggcaacagcggctac
catggcctggtcgacgaagataagctgatcgtcgatgtgacgccgaaaatacgcgccgtt
ggcgccgaaatctgcgccttccgcatcgtcaacaaacatcacggagagactccattcgag
attgtggtgaaagatcgggagaagggcgaagctgaattacgggccaagaagagcctcaac
tgtgagaagaagaagaactacaagttcgacattgtagccgtctcctgcgccggaatctca
tcggaaaatgcgacggtgcatatcagcgtcaatgacgtcaacgagtacgcaccgaaattc
aaccagccgtcgtacgtcgtcgatgttgacgaaggtcgaccggctgacaagatcatccag
gtggaagccaatgacgccgactgttctgccaagtacggcgacatttgccgctacgacatc
ctcaacaaagatcaaccgtttgccatcgacaatgaaggtgtcattcgcagcatcgagccc
ctggattacgaaaagaatcacaatcacatcctgcaggttgtcgcatacgattgtggaatg
aaacgatccgagcccgtcctggtcagcgtcaaagtcaaccgagtctgccgtcttggatgg
actggcatcagcgaacgtgtggaatacgtacccggatcgggtcgacaggatcttttcccc
gaggcgcaaatcaacttgtgcgatttcccttgccaacccgaatccatccaggcccgtctc
acgttggcttcctcccatttgggcaagaactgcgaccgcgatacttacaccgtccagaac
caaaggaaattgtgcggagccaatagccgtgccatcgatctcttgccgccaccaggacct
ggggccgaatggacgcgtgacctccccgttgaccaaggacgtgaagccgatcaggtcttc
gtgtttgacggatcaacaggcgtgacggtaccgccggaagtgatggctcacaacctgacg
agaaatttcaccatgtcggtttggctgaagcacgaacaccacgccggacaggacaaacat
gtcaaagagcacattctctgcaatgcggatgatcaccaaatgaaccgtcatcatttctct
ttgtttatccgcaattgtcggctcattttacttttgcgtcgggagtttggagacggagat
ctcaaaagtttccggccggctgagtttcgctggaaattgcctcaggtttgcgacggacaa
tggcatcattacgccgtttccatggagttcccagaagttcaactgtacgttgatggacgt
cccatggtagccagcaaaaacaaccctgaaattattgatgactggccgctccataacagt
cacggattgaacacaactctcacggtcggcgcttgctggcaaggatcccaaagccggatg
caacattttatgcgcggctcaatggctggcctttcggtgctggctggccaaatcgaactc
gatgaagtgatcgcttgtttgcacaagtgcaaagagaatctcgaagctccgccaatggaa
cttcttcaaccgggcatggaaatcctgaacaacaacgatttgaccgagttgacattggag
ggcgaaaacaagaccaacttggaggtgctattgcgtaaagtcgcctacgccaatctgaga
gacttcccaacgcctggccgccgtcctctgcgtctctacacgaatatcgtgtgctcgtcc
ggccggacactcaagatccccgtcttggagagcgccattgtggtccaggccactccgcta
cctattgttaccgtcaccggtctgtccagctctcattacggctacgagtcgttgagaagt
ggcgtccatcttttcccagacgctcgcatcgaagtcagcaacgctgacgccgccgctgct
caagactcttcctcggaagaggatgagtcatctgaagaagaggacctgatgatgaacatt
gcccagcgcgtcgactcttgcacggccaccgtctacccgccgctgaatccggatcacgaa
acgcttacttggccgcagaatctcctcagccagttcaagattgaagccaaattcagccac
gacggtgtcactttgatgggcagcgaatccacaaaccactacgaacagatccttcatcag
ttgcagtacaacaaccacaagccggcctactatttgacccgcgctttcaagctcatctgc
tcgcagatgagcgggcgatttgccagcaacgagctcatccacactgtcaccgttgatcat
ccgcaagcgtcttcattcgttgatggatcgacttctacgccggtggtggccgcttctagc
acttcgggcgcggcatccagttcgtcgcttggccattcgaccgaaccatctaccagcgct
ccgcaaccacccaaccaacagacgttgagtcatcagagcaagacggccgccccggcgcac
gctaaggttgaccggcatcacgttgatatccgtcccgtcggacccattaccgccatctcc
gatgtttatatgggcacgggcatgggtggcaccgttcagggccacctgtccagcggtgct
agccacaccgtaacgatcatcgtgatggtctgcgccggtttccttctgctgatgatcagc
ttgggagtggtgcgcgttcgtgccgctaggcgccgcgcccaacaagacgagacgacggcc
gacactgaaatggcttgggatgattccgccctcaccatcaccgtcaacccgatggagacg
ctggaggccgccgaaaagtcgactatgacacgaacttcgcaccgtcacgacgattccgac
tctgaagatgacagttgccatggcaacgattccagcgacgaagatccggatgatgacgac
gacgatgacgacgacgatggtggcgcatgcaaagcccgcgacctcgagtgggacaattcc
accttgagtatttaa
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