Daphnia carinata: 130687106
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Entry
130687106 CDS
T11669
Name
(RefSeq) DEAD-box helicase Dbp80-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
dcar Daphnia carinata
Pathway
dcar03013
Nucleocytoplasmic transport
dcar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dcar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130687106
03015 mRNA surveillance pathway
130687106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcar03019
]
130687106
Enzymes [BR:
dcar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130687106
Messenger RNA biogenesis [BR:
dcar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
130687106
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Queuosine_synth
AAA_30
Motif
Other DBs
NCBI-GeneID:
130687106
NCBI-ProteinID:
XP_057366245
LinkDB
All DBs
Position
2:4476975..4479552
Genome browser
AA seq
490 aa
AA seq
DB search
MATSSLDWGAAANEEEKEMTAKLTNVNLRNQEEPPPWMVPSEEPSVTTPEEGLAGSVEDS
EKISAAEKSLLQKVIRKGLVENHHDLEIQRKDPNSPLYSVKTFEALNLRPELLKGVHAMG
FDAPSKIQETALPTLLSDPPQNMIAQSQSGTGKTAAFVLAMLSRTDVSKNYPHVVCLSPT
FELAIQTGEVAKKMAKFCPHIKIRYAVRGEELPRGTQINDHILIGTPGKLLDWGTKLRCF
DLTKVEVFVLDEADVMIATQGHQDQSIRIHKLLPKTCQMMLFSATYDEDVMKFAEMIIRN
PVVLKLHREQQSLDNIKQHYVVCKSKEDKYRSISNIYGVLTIGQAMIFCHTRKTASWLAE
TMSREGHAVALLSGELEIEQRINIINRFREGKEKVLITTNVMARGIDVEQVTMVVNFDLP
VDQSGRADCETYLHRIGRTGRFGKSGVAINLVDGPRSMQVLQYIENHFKRPILKLDAEDV
DEIEKLNKDD
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggcaacatcttctttggattggggagctgcggcaaacgaagaggaaaaagaaatgaca
gcaaagttaacaaatgttaatctgagaaatcaagaagagccacctccatggatggtcccg
tcagaagaaccttctgtaacaacacctgaggaaggcttagcaggaagtgttgaggacagc
gaaaaaatatctgctgctgaaaaatcacttctacaaaaagtcattcggaaaggccttgtt
gaaaaccatcatgacctagaaattcaacgaaaagatccaaattctccactgtattctgtc
aaaacatttgaagccttaaacctccgacctgagcttttaaaaggcgtccacgctatggga
tttgacgcgccatccaaaatacaagaaacagcacttcccactttactgtcggacccacca
cagaacatgatagcccagtcacagtctggaacaggaaaaaccgccgctttcgttttggcc
atgttaagccgcacggatgtttcgaaaaactatcctcacgtagtctgcttgtctcctact
ttcgaattggccattcaaacaggagaggtagccaagaaaatggcaaagttttgcccacac
ataaagattcgctacgctgtcagaggcgaagaacttccaagaggtacgcagataaatgat
catatactcatcggcacccctggcaagctgttggattggggcacaaaattgcgttgtttt
gatctgacgaaagttgaggtctttgtcctcgacgaagctgatgttatgatcgccactcaa
gggcaccaagatcaaagcattcgaattcacaagttgctacctaaaacgtgccagatgatg
ttgttctcagccacctacgacgaagacgtcatgaagttcgctgagatgattatccgaaat
ccagtcgtgctcaagctacatcgcgaacagcaatcgctagacaacatcaagcaacactac
gtcgtctgtaagagcaaagaagacaaataccgctccatttcaaatatttacggcgtgctt
accatcgggcaagccatgatcttttgtcacacaaggaaaacggcgtcctggctagctgag
actatgagtcgagaaggacatgccgtagcgcttttgagcggcgaattggaaattgagcag
agaatcaacatcataaatcgattccgtgagggcaaagaaaaggtcctcatcaccacgaac
gtcatggcccgcggcatagacgttgagcaggttacaatggtggtcaactttgaccttcct
gtagatcagagtggaagagcagattgcgaaacctatctccatcgtattggtcgaacggga
cgtttcggcaaatccggtgtagccatcaacttggtcgacggtcctcgttcgatgcaggtt
ctacaatacattgaaaaccatttcaagcgacccattttaaaattggatgccgaagacgtt
gacgaaatagagaagctcaataaagatgattaa
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