Daphnia carinata: 130687186
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Entry
130687186 CDS
T11669
Name
(RefSeq) small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
dcar
Daphnia carinata
Pathway
dcar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dcar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130687186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcar03019
]
130687186
03041 Spliceosome [BR:
dcar03041
]
130687186
03032 DNA replication proteins [BR:
dcar03032
]
130687186
Messenger RNA biogenesis [BR:
dcar03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
130687186
Spliceosome [BR:
dcar03041
]
Complex A
U1 snRNP components
Sm proteins
130687186
U2 snRNP components
130687186
Complex B
U1 snRNP components
130687186
U4/U6.U5 tri-snRNP components
130687186
Complex C
U2 snRNP components
130687186
DNA replication proteins [BR:
dcar03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
130687186
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
DUF7731
Motif
Other DBs
NCBI-GeneID:
130687186
NCBI-ProteinID:
XP_057366319
LinkDB
All DBs
Position
4:complement(6205435..6206059)
Genome browser
AA seq
88 aa
AA seq
DB search
MAAPMPINPKPFLNSLTGKPIMVKLKWGHEYKGYLVSVDGYMNLQLANTEEYIDGSCTGN
LGEVLVRCNNVLYIRGVEEDDEEGEMRD
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atggcagcccctatgcccataaatccgaaaccttttctcaacagccttaccggtaaacct
atcatggttaaactgaagtggggccatgaatacaaaggttatttggtttcagttgatgga
tacatgaaccttcagttggcaaacacagaagaatatatagatgggagctgcactggtaat
ttgggggaagttcttgtcagatgtaacaatgtgctttacatccgaggtgtggaagaagac
gatgaagaaggagagatgagagattga
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integrated database retrieval system
