Daphnia carinata: 130687419
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Entry
130687419 CDS
T11669
Name
(RefSeq) replication factor C subunit 3-like
KO
K10756
replication factor C subunit 3/5
Organism
dcar Daphnia carinata
Pathway
dcar03030
DNA replication
dcar03410
Base excision repair
dcar03420
Nucleotide excision repair
dcar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dcar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
130687419
03410 Base excision repair
130687419
03420 Nucleotide excision repair
130687419
03430 Mismatch repair
130687419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dcar03032
]
130687419
03036 Chromosome and associated proteins [BR:
dcar03036
]
130687419
03400 DNA repair and recombination proteins [BR:
dcar03400
]
130687419
DNA replication proteins [BR:
dcar03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
130687419
DNA Replication Termination Factors
ELG1-RFC complex
130687419
Chromosome and associated proteins [BR:
dcar03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
130687419
DNA repair and recombination proteins [BR:
dcar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
130687419
Check point factors
HRAD17(Rad24)-RFC complex
130687419
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA
AAA_lid_RFC1
AAA_11
Rep_fac_C
AAA_22
AAA_5
Sigma54_activ_2
AAA_16
Mg_chelatase
ATPase_2
RuvB_N
Hda_lid
AAA_2
nSTAND3
baeRF_family12
AAA_30
Na_H_antiporter
FtsK_SpoIIIE
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
130687419
NCBI-ProteinID:
XP_057366570
LinkDB
All DBs
Position
4:4837928..4839578
Genome browser
AA seq
355 aa
AA seq
DB search
MSLWVDKYRPSTLAKLDFHREQAERLEKMVAKGNFPHLLIYGPPGAGKKTRVMALLRELY
GPGVEKLRMEHQNFTTPSNKKIEVMTIASNYHIEINPNDAGIYDRIVIQEMIKNIAQAQQ
LDIGGQREFKVVVLTEVDKLTKDAQHALRRTMEKYMATCRIILCANSTSKIIGPLQSRCL
GIRIPAPSHEDVIKVLQMVSKKEGINLPDEFAIRLAEKSERNLRRALLMLEACKVQQYPF
TAKQEIVEPDWEAYLRETGQKMVSEQSPKALLEVRGRIYELLSHCIAPEMIIKKLLREIL
KNCDGQLKAEITSMAAYYEHRLCLGSKVIFHIEAFVAKFMAIYKRFLEESFANMM
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgagtctttgggtagataaatatcgtcccagcactcttgcaaaattagactttcaccgt
gaacaagccgagcgcttagaaaaaatggttgccaaaggaaattttcctcatttgctcatt
tacggtcctcccggagccggaaaaaaaactagggtgatggcccttcttagggaactatat
ggacctggagtggaaaagctacgcatggaacaccagaattttactaccccatctaataag
aaaatcgaagtcatgacaattgcaagcaactatcacattgaaattaatccaaatgatgct
ggtatctatgacagaattgtaattcaagaaatgatcaagaacattgctcaagcacaacaa
ttggatattggtggccagagagaatttaaagttgttgttttgaccgaagttgataaacta
accaaagatgcccagcatgcactgagaagaacaatggaaaaatacatggccacctgccga
atcatcctttgtgccaattctacttctaaaattattggaccactccaaagcagatgtctt
ggaataagaattccagctccctctcatgaagatgtcattaaagttttgcagatggtaagc
aaaaaagaaggaattaatttacctgatgaatttgcgatacgtttagcagaaaaatctgaa
aggaatctaagaagagcactactaatgttggaggcttgtaaagtacagcaatatcccttc
accgctaagcaagaaatagtcgagcccgattgggaagcgtatcttcgagaaacaggacaa
aagatggtctccgaacaaagcccaaaagccttattagaagtgcgaggaagaatctatgaa
ctcttatcgcattgcattgcgccggaaatgataatcaagaaacttcttagagaaatccta
aaaaattgtgatggccaattaaaggctgaaataacttctatggctgcatattatgaacac
cgtctatgtcttggaagcaaagttatctttcacattgaggcgttcgttgcaaaattcatg
gctatctacaaaagatttttggaagaaagcttcgcaaatatgatgtaa
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