Daphnia carinata: 130688094
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Entry
130688094 CDS
T11669
Name
(RefSeq) AT-rich interactive domain-containing protein 2-like isoform X1
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
dcar Daphnia carinata
Pathway
dcar03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dcar00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130688094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dcar03000
]
130688094
03021 Transcription machinery [BR:
dcar03021
]
130688094
03036 Chromosome and associated proteins [BR:
dcar03036
]
130688094
Transcription factors [BR:
dcar03000
]
Eukaryotic type
Helix-turn-helix
ARID
130688094
Transcription machinery [BR:
dcar03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
130688094
Chromosome and associated proteins [BR:
dcar03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
130688094
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
Motif
Other DBs
NCBI-GeneID:
130688094
NCBI-ProteinID:
XP_057367070
LinkDB
All DBs
Position
8:481614..489350
Genome browser
AA seq
1796 aa
AA seq
DB search
MAEHLGKDVKTYAEEYTSFCRELKSFHDIRGTSFNRLPRLHGHEVDLYLLYSLVTSHGGW
EKVNIHGEWESLLPYFGIHRLCANGPIALKQIYIRYLDVYERIHFLGEEVDRRESEHHEE
DDARNRRKALRLLHATPTAYNASQHVISDHVRNTAGLSTDVLQVTPTERVFLSLLCPLPN
EQDFAINVCSLLAMENRRPFPLHQCPRIVDALLAHAGIFSQVDIRDLFTESYRKYRKQNL
GRFWRDVVPDADIVQLSEEDLVFPQEDVTAIVGSYWSDRSVRKTPDAIKQTEVPSRTRTL
DHLPEEADDASNKVHLVVRPLGSEKPIRSVTLNSKDGELESPLIEHDSTLIEEETTLIEE
ESQCSVILYENGAGPLSASGSDVVSATSPPGVERAPSCEPNFRNCLAKSANIFRKPTSDA
SVTEDLQTKENPVIPQTSENLSVDRIIQPNCELFSNEDTAIAQGSSEDTASRTKTILVSE
GAVPNPPVVVPNNNIEMETPSQAEANIERKVVAPKNKLPIAVQKPDNPRAIRYWLDQRKA
ARCPIENLTVEQDEAEAQFESEESDLFHVGREQGVHDALGQRVLQVLNVIRNLSFDDVNS
AVLAQSEACMRLLLLAAHARWSCLPQLAFDALSNVALEVNLKDPADCSLSAILLGTVTRG
LESSDRFIVLRCMETLGRLAQRGENELLLMASLDSHVYEKLCSYLTIPDVALLIYTLECV
YALSSLGQSTCNAFLHCQGALDVLISLLTVEAQSYGSKARILMNVVETVAEGETVAAHAQ
LNPIQCVVRPTHSNSPAPSAPSTPPPMLLQPVAAPMPASPNSLTKIQPKTNANSRPSTPT
QSKPGVVNITQTEKEQIAMQWLRATFESVVGAPSIEQNVLYRQYTAGCSRNGPKQVLGIV
QFFSCVRATFGQNVGPFRKQVGSAVEFYFEGISSKGSTTSVAIPTTNTVVRSPTPTPMEV
PGSPILKAQLCAPPKATNRKEAPKQSLAHPHLSQALGQGGPSQSEMGQIASTGSSVPPTS
SLIKSLLANKVPTDSNSQSANHVASLGLSPTATALPGMTRVPSMNSHGSLSVSSAQIISL
PHSGITAPQVAQRQQQQKLLQQQQTVVMNGPSKDSHTKVKGAQVNVSTPKMNGVCPEMEP
HSGGSQPSDGKVMGKGMLADLLEREVKKEPVNGATTVTGKELRISDNGLELVQNDSRGRV
AVDMGVVGMNDLGVDLGDGAAAPKAAHLIAQVDDSGHVQIHLEEEAGSAVCNGQSLLDQL
EACEVSSSTDEIVASQTTKSATKRPVDPVESNDSPAPKKLATNQVNVKLNENTDATVSDQ
HPLDKNKDKVSINGGINGIVETAGTVPVTAALAPQIHQIPPATVLGPNTPRTFLILQQQS
PQQARLGFPQQGQRLLLAIQRPGGLIQHVAMPANVVAITSNQLQTNGAVVTLSNSVGTNA
MSTVYRDSTSSTGQTLPSSAVSLIANGNCVPVSTAILSASSQPISVSNTVSSVVTTASME
GVVTFSGGAVAFPARPTENTARSSSLAESHVTITPVLASSIVSSVTSATTVTTSPAASPA
TIAHANVTTTPGIKKRNNSIEATKPRGRPMKSKSTDCQPVSSPSPQPVDSSLQYLCEWKD
CMRSFKTPHEVYVHACQVHCPVQVEELGCLWERCDGLKRRRFSMMTHLMDRHCNEEMQRL
LAARRHQMNTQGKTDIPAPQAPTPHPGYAPHAALHAIKRHAVELMNQKEQEEKEGPVTKS
IRLTSALILRNIATHSAIGRRSLQRYENHLASVALSNVESSRTVAQILYELTHQCS
NT seq
5391 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacatctcggcaaagacgtcaaaacatatgccgaagaatatacttcgttctgc
cgggaattaaaatcttttcacgacatccgagggacaagtttcaaccgacttccacggtta
cacggccacgaagtcgatttatatcttctctattccctcgttacatcgcacggtggatgg
gaaaaggtcaacatccacggtgagtgggaatcccttcttccctatttcggcattcaccgt
ttgtgcgccaacggaccaattgcactgaagcaaatttatatcagatatttggatgtttac
gaaaggatacacttcttgggagaggaggttgaccgacgagaatctgaacaccacgaagag
gatgacgctcgtaatcgacgcaaagctttgcgacttcttcatgctaccccgactgcttat
aacgcttcacagcatgtcatttcagatcatgtacggaatacggctgggttatcaacggac
gttctgcaggttactccgactgagcgagtgtttctctctctactttgccctctgccgaat
gagcaagacttcgccatcaacgtctgcagtcttctcgcaatggaaaaccgaagaccattt
ccactccaccagtgcccccgtatcgtcgatgcgttactagctcatgcgggaatattttcg
caagttgacattcgagatttatttacggaaagctaccggaaatatcggaaacagaacctc
ggtcgtttttggcgcgacgttgtccctgatgcagacattgtccaactgtcagaagaagac
ttagtgttcccccaagaagatgtaaccgcgatcgtaggctcatattggagtgaccgttct
gttcgtaaaactccggatgccattaaacagacagaggttccatcaagaactcgaacacta
gatcatcttccagaagaagctgatgatgcatcaaacaaagtgcatctggttgtacgccct
ttaggtagtgagaaaccaataagatcagtgacgttaaattccaaagatggggaactcgaa
tcgccgttgattgaacatgattcaaccttgattgaagaagaaacaaccttaattgaagaa
gagtctcagtgtagtgtcattttgtacgagaatggagcaggcccgttgtcagcttcagga
tctgatgtggtttcggctactagtccaccgggcgtagaaagagcgcccagttgtgagcca
aacttcagaaattgcctggcaaagtcggctaatatatttagaaaaccgacatcggatgcc
tcagttaccgaagatttacaaactaaagaaaatcccgttatcccccaaacatctgaaaac
ctttcagttgacaggattattcaacccaattgtgaacttttttctaatgaagatactgcc
atagcgcaaggatcttctgaagataccgcttcacgcacaaaaacaattttagttagtgaa
ggtgccgttccaaatccaccagtcgtcgtacccaacaacaacatagagatggaaacaccc
tcacaggcggaagccaatattgaaaggaaggtagttgctcccaagaacaaattacccatt
gctgttcaaaaaccagacaatccacgagctattcgctattggctggaccaacgaaaagct
gcacgatgcccgattgaaaacctaacagttgaacaggatgaagctgaggcccagttcgaa
tccgaggaatcggatttgtttcatgttggtcgtgaacaaggcgtgcatgatgcccttggc
caaagagttttacaggttcttaatgttatccgcaatttgagttttgacgatgtcaactcg
gcagtgttggctcagagcgaagcttgcatgcggcttcttcttctggctgctcatgcaagg
tggtcttgtctaccgcagttggccttcgacgccctatcgaatgttgcattagaggtcaat
ctaaaggatcccgccgattgttcattgtcggccattcttttgggaacggtcacacgtgga
ttggagtccagcgatcgttttattgtactccgttgtatggaaactttaggtcgtttggcc
caacgcggcgagaatgaattacttttgatggcgtctctcgattctcatgtttatgaaaaa
ttgtgctcctatttaactattcccgatgtggcattattaatttacacgttggagtgtgtt
tatgcgttgtcttccctcggccagtccacttgcaatgccttcctgcactgccaaggagcg
ttggatgttttgatttccctcttaactgttgaggcccagagctacggctctaaagcccgt
atcctaatgaacgtagtcgaaacagtagctgagggagagacggtggccgcacatgcgcaa
ttgaatccaattcagtgcgtggttcggccgacccattctaacagtcccgcaccgagtgct
ccatcgactccgccaccaatgctgctgcagcctgttgctgcccctatgcccgcatcaccc
aattcgctgacaaaaattcaaccaaaaacgaatgccaattctagacccagtacgccaact
cagtcaaagcctggagttgttaatatcacacaaacggagaaagaacaaattgctatgcaa
tggttaagagctacattcgagtcagtcgttggagcaccaagtatagaacaaaacgtgctg
tacagacagtatacagccgggtgttccagaaacggtccgaaacaagttttagggatcgtg
cagttcttctcctgtgttcgtgcaacatttggccagaacgttggaccgttcagaaagcaa
gtcggcagtgccgtggaattctattttgaaggaatttcgtcaaaaggctctacaacttct
gtggcgattccgacaaccaatacagtggtgcgttctcctaccccgactccgatggaagta
ccaggttctcctatactaaaagcacaactgtgcgctccaccgaaagccactaatcggaaa
gaagcgccgaaacagtcgttggcacatcctcatttatctcaagcgttaggtcaaggtggt
ccgtcgcaatctgaaatgggtcagattgcgtcgactggtagctcagtaccgccgacgtct
tctttgatcaaatccctattggctaataaggtaccaacggacagcaacagccagtccgct
aatcacgtggcctctctgggtctttcgcccactgcaacggccttgcccggcatgactaga
gtacctagcatgaattcgcatggtagtctttctgtttcttctgcccagatcataagcctt
ccccattcaggcattaccgctccacaggttgctcagagacagcagcaacaaaaactttta
caacaacaacagacggtggtaatgaacggtccatcgaaagacagtcacacgaaagtcaaa
ggtgctcaggttaacgtcagcaccccaaaaatgaacggggtgtgtcccgagatggagcca
cattcgggaggaagccagccgtccgacggaaaagtgatggggaaaggaatgttagcggat
ctattagaacgtgaagtgaagaaagaacctgttaacggtgcgaccactgtgaccggcaaa
gaacttcgtatcagtgataatggactagagctcgttcagaatgactctcgtggtcgtgtt
gctgtcgacatgggagtcgtcggtatgaatgacttgggggttgatttgggagatggtgcg
gccgctcctaaagcagcccatcttatcgcacaagtggacgattctggacacgttcaaatt
catctagaggaagaagcgggtagtgccgtttgcaacggtcaatcgttgttggaccagttg
gaagcgtgtgaagtttcctcgtccactgacgagatagtggcaagccaaacgacgaaatcc
gctacgaagcgaccagttgaccctgtggaatcaaacgacagtcctgccccaaaaaagtta
gcgacaaatcaggtgaacgtaaagctcaacgaaaatacagatgccactgtaagtgatcag
catccgctcgacaagaataaagacaaagtttcaattaacggaggcataaacggcattgtg
gaaactgccggcacagttcctgtcactgctgcgttagctcctcagatccaccaaatccca
ccggccactgttttagggccgaacacacccaggactttcttgatccttcagcagcaaagc
ccacaacaagccaggcttggctttccacaacaaggtcagcggctgttgttagccatccag
cgacctggcggcttgattcaacacgttgccatgccagctaatgtggtagctataacgtca
aatcagttgcagaccaacggagctgtcgttactctgtcgaattcggttggaaccaacgca
atgtctactgtgtatagagattcgacatctagtaccggtcagacgctaccctcctctgcc
gtaagtctcattgccaatggtaactgtgtaccggtatccacggctattctctctgcgtcg
tcgcagccaatcagtgtgtccaacactgtttccagtgtcgtcacaactgcttcgatggaa
ggcgtagttactttctctggtggagctgttgctttcccagcccgacctacggagaacacg
gcacgcagttccagcttagcagaaagtcatgttaccattacgccggttcttgcctcatct
atcgtcagttctgttacttcggccacgacagtgaccacatcacctgcagcgtcgccggcg
actattgcacatgccaacgttaccacaactcccggaataaaaaaaagaaataacagcatt
gaagcgacaaaacctcgtggtagacccatgaaaagcaagtcaaccgattgccaacccgtt
tcatctcccagtcctcagcctgttgattcatccttacaatacctttgcgagtggaaagat
tgcatgaggtctttcaaaactccgcacgaagtttatgttcacgcttgtcaagttcattgc
ccggttcaagtagaggagttgggatgcctgtgggaacgttgcgacggcctcaaaaggcga
agattctcaatgatgacgcatctcatggatcgccattgcaacgaagagatgcagagactg
ttagctgcaaggagacaccaaatgaacacccaagggaagacggacattcccgcgccacaa
gctccaactcctcatcctggatacgcacctcatgcagcactgcacgcaattaaacggcac
gcagttgaactaatgaatcagaaagaacaggaggaaaaagaaggcccggttaccaaaagt
attcgattaacttcagccctaattctccgtaatatcgccacccactccgcaataggaaga
aggagtcttcaacgttacgagaatcatttagctagcgtcgccttgagcaacgtggagtca
tcccgaactgtagcgcaaatcctgtatgaactaacccaccaatgcagctag
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integrated database retrieval system
