Daphnia carinata: 130688606
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Entry
130688606 CDS
T11669
Name
(RefSeq) transcription elongation factor SPT4-like
KO
K15171
transcription elongation factor SPT4
Organism
dcar Daphnia carinata
Pathway
dcar03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
dcar00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
130688606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dcar03021
]
130688606
03019 Messenger RNA biogenesis [BR:
dcar03019
]
130688606
Transcription machinery [BR:
dcar03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
130688606
RNA polymerase I system
130688606
Messenger RNA biogenesis [BR:
dcar03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
130688606
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt4
DUF7317
zf-C4
HVO_0758
Motif
Other DBs
NCBI-GeneID:
130688606
NCBI-ProteinID:
XP_057367586
LinkDB
All DBs
Position
9:complement(5429554..5430306)
Genome browser
AA seq
117 aa
AA seq
DB search
MSVDIVPKDLRNNRACLVCSLIKTFDQFEFDGCENCDEFLRMKNNKDNIYDCTSTNFDGM
VALMSPEDSWVAKWQRINRKVKGVYAISVSGRLPETFIRELKSRGITYRSRDTSQRQ
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcgacattgttcctaaagatcttcgtaacaatagagcttgcctcgtgtgctcg
ttgataaagacgtttgaccaatttgaatttgacggatgcgagaattgcgacgagtttctt
cgtatgaaaaataacaaggacaacatttatgactgcaccagcaccaactttgatggaatg
gttgcactgatgagccccgaggatagttgggtggccaaatggcaaagaattaacaggaag
gttaagggtgtttatgcaatttccgtgtctgggcgactacctgagacattcattagagag
ctgaagtctagaggcattacttacagatcccgagacacaagccaacgccaataa
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