Daphnia carinata: 130689763
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Entry
130689763 CDS
T11669
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
dcar Daphnia carinata
Pathway
dcar03018
RNA degradation
dcar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dcar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130689763
09123 Folding, sorting and degradation
03018 RNA degradation
130689763
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcar03019
]
130689763
03041 Spliceosome [BR:
dcar03041
]
130689763
Messenger RNA biogenesis [BR:
dcar03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130689763
mRNA degradation factors
5'-3' decay
Lsm complex
130689763
Spliceosome [BR:
dcar03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
130689763
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
130689763
NCBI-ProteinID:
XP_057368686
LinkDB
All DBs
Position
6:complement(4783812..4785238)
Genome browser
AA seq
134 aa
AA seq
DB search
MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSKDGDRFWRMPECY
IRGSTIKYLRIPDEVIDMVKEEVVAKGRGRSDGKGRGGAQRGRGGNRGSFGASRGRGAPS
GRGGGGGTNKPRGK
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atgttacccctgtcgttattgcgtacggcgcagaatcaccccatgttagtagaattgaaa
aatggagaaacttacaatggtcacttagtgagctgtgataactggatgaacatcaattta
cgagaagtcatttgcacatccaaggatggtgacaggttctggagaatgccagagtgctat
ataagaggtagtactattaagtacctgcgcattccagatgaagttattgatatggtgaag
gaagaagttgtggccaagggtcgtggtcgcagtgatggcaagggtagaggtggagcccaa
agaggcagaggtggtaatagaggttcttttggagcatctagaggtcgaggtgcaccgtcg
ggacgaggaggtggaggcggtaccaacaaaccccgtggaaagtaa
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