Daphnia carinata: 130694624
Help
Entry
130694624 CDS
T11669
Name
(RefSeq) nucleoprotein TPR-like
Organism
dcar Daphnia carinata
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR
TPR_MLP1_2
Nucleoprot-TPR
ZapB
Motif
Other DBs
NCBI-GeneID:
130694624
NCBI-ProteinID:
XP_057373674
LinkDB
All DBs
Position
4:2775430..2783666
Genome browser
AA seq
2306 aa
AA seq
DB search
MATVSLLSVVLSDDEFKNLNDTIKFKLEEVLKKHENDFNQLNIKLAKLQTQSEQQCFELD
SQLQQLQDQGKKEEKHIQELTDAKAKVDADLTSSQEQLRLVSAKLALLEASHQEWSKEKE
SLLEEKENLNSLLSRRNDDLDRLTGELKSLTDQLVHANKEKSEALIKTEELNSQQLALEY
KEKRLNQERELIVRQQRLLQDELESRTKEVMMIRREKTSKVLELQADVSEKIEELRIAHK
SIGELTATIEGHEKHIKELNDKVKELGETEMKMSENHRNELRSQMRLCELYKASSEDAQA
KADELTKATEELQRLLRDASVRFGKLETDSKAQIDQLKDQLEKSSESNMELKKELERANN
LLDPSKSRLMTAENIEAMSPSAAAASRLLKSGMTLTQIYSQYVSVSEQMLFKEEENKKLN
SYIDQILQELEDRAPTIARQREDHEKSIEMVANLTRQLDLAVQEAETEKENALEARRVLG
QAQRNSQRFEKQVADLSKQVCLLIREVEELRGNRLREEPVDDDQVSSSEGSAASVISRHL
VTFRDVEELQQKNQMLLTALREVTEKQDAAEQGEIDIKTAKIQQALENALSEVEHLRDTR
RRHEELMESVIQQRDMYSTLLQEAGLGDSRSPSKFRNVVASTPAPVRQESTRSGDTETQL
NETKQRLEEQEMKLQNVIKEKKERETALESQIQTLQDQLTELRAQNVRLSTHKEYADAKE
KLLQGNLDSCKKQLNALEDKNKIYACTVAKHEQSIAILRDEAMNAQQQLARAEVTISMLQ
EEKQLLKDAEQRLLVERNALLSERRSQSLLHANLESIKLNLERGESETHMRLQNTVTSLE
QQIELLRKKLDLEEQRYRETVKSFEDKILADQALLKAAEGKAANAEAQLVVARERLAAAE
SRTGLTSPTRKGQVTRLLSTTPTSGDVATDSDLVGDLRAQLAEARMETSKYQEQLELVRQ
QSEQYRSIADSMEEQLTKSNVASLAFKQETEQLLAKLNEERSELARNLQETQDKLKALEE
GAAQLGRATAHQSEEVSNRITQLEANVASLTDQVRLAEESEAKARQESLDQVKHAKDAQE
KYERELMQHAADVEQLNAVRERVEQSRSQLALLQQTSARLEAELATGRSSWQAQKEMLEK
EASEKARRCSDLDKQVDVMQQQIVTLSSRMAAATRCQEIAVKTQSGEDGNTSLNTSTSEE
DVRSTDQLLELVRFLRREKEIAISRSEVQEAETQRLKTQLEQAERNLNEAQTNLQQERER
SATSALTSEKHTEMLRRLETLNALTDSNRLLRDERGGLVSRVEELTVKVSALEAELEPLR
SNNHDSASRLEELSAENATLRKQVVAWRTRTNALQERAGRATADEIKKLQSDKELVQKQL
EQIQKQVEQMKEAQTKTANQLTETQRVNTQLVTAQQKLQEEARLAKEESQKAQSEMTTAL
AKRDEETAKAADQANQLRRIARKYKTQYEELKVTHDKLVSDKEASASAESAPAQDEATSA
ATTEAATAAAAGQATKIQELEEQIAQMAAELEKIKQDNEAMRLKDEKATNVLKTTRQKLA
SLPTLIKEKETLVAQLEEARAKIESLEQSSEELNVRSAALRSQLEGRLSRLERENSELLA
SKQALETELEALKQRIPVLQRHIEAYQKQLVLFQQRQQKQQVQQTTQQVPNKPPTTEKTV
SENPPTANIKPMASGTAVTPQRPPVSSSPGQVASGPNQVHRTTPTASIRPMAMTTRTMAV
PPTSVAVSPMAPPPIAIAPPNPVVPTTPPVNQEEPVAGPSFIHGGDEGPSSSGEDRSKKR
ARTTEESPSNEDTSVKRTRLSEQTEEEVEVIDLQEEPAEESAEDYATRTGEMELVIEYEE
QPQEDHEVEEEEVEEGLIESEEEEMVETVDPEEEDQEEECDEIVVEEQREDVEEPTQPEQ
ESEAVLTITEEETVSVTVQEPVEEAVVQQVPAEDVESEAFVPVNTNEAASSDVSQATIRP
PPREDRLPSFGRNTLAFEDVGDDGIVPSTPVLLRPRTNDGFAEAVSSPQVNTRFVFGTVP
ELSAGTSHSNAPSHLESQGMEDTRMDLSQLEENSGRSVPSTPLQVSPHDELPAVNQGEEA
SVVPAGNTEEQGDFEGGPDLEGDAAAEIDLLGEDDQDTADNEQSTSQVGQDPVPSTTTED
DSLSEASEVSNIQSAEGSSQPMTTQASPTSSTSSPSARGVLTRRASMAGFPRGRGVNRED
SRLSAAQNTNRPVPITWTPNPAQPAYTPNPARVFRRVPTASTSPAPGAPAVITELSAVAT
TSPVPPVMRGRGATRGRPRSRAPRRM
NT seq
6921 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgttagcctcttgtcagtagttttatcggacgatgaatttaaaaatctgaat
gacacgataaagttcaagttagaagaggtgttaaaaaagcacgaaaatgatttcaaccag
ttgaatattaagttagccaagcttcaaacccagtctgaacaacagtgttttgagttggat
tcacaacttcagcaactgcaagatcagggaaaaaaggaagaaaaacatatacaagaattg
acagatgctaaagctaaggtggatgctgatcttacgtcctcacaagaacaactcagactt
gtcagcgcaaaattggctttacttgaagcttctcatcaagaatggagcaaagagaaggaa
tcacttttagaagaaaaagaaaatcttaattctctactttcaagaagaaatgacgacttg
gataggcttacaggggaactaaagtccttgactgaccaacttgttcacgccaacaaagaa
aaatcagaagctcttattaaaacagaagaactcaatagccaacagcttgccttagagtac
aaagagaaaaggctaaaccaagaacgggaacttattgttcgacaacaaagattattacaa
gatgaacttgaatcccgaactaaagaggttatgatgatcaggcgtgagaaaacctcaaaa
gtgttggaactgcaagctgatgtgtccgagaaaattgaagagttgcgcatcgcgcacaaa
tccatcggcgagctaacagctacgattgagggccatgaaaagcacattaaagaattgaat
gataaggttaaggaacttggtgaaacagaaatgaagatgtctgaaaatcacagaaatgag
cttaggtcacagatgaggctttgcgagctgtataaggcgtcgagtgaagacgcccaagcc
aaagctgacgagcttaccaaagcaacggaggagttgcaaaggcttcttcgggatgcttct
gtccgatttgggaaactggaaacggattctaaagcacaaatcgaccaattaaaggatcag
ttggagaaaagctctgaatcaaacatggaactgaaaaaagaacttgagcgtgccaataac
ttgcttgaccccagcaaatcgcgtttgatgactgcagaaaacattgaagccatgtcgcct
tcagctgctgcagcctcacgattgctgaagtcaggaatgaccttaacccaaatatacagc
cagtatgtgtctgtttccgaacaaatgctattcaaagaagaagaaaataagaaattgaat
agctatattgaccaaattcttcaggaattagaagaccgtgcgcctactatagctcgtcag
cgagaagaccacgaaaaatcaattgaaatggttgcaaatttaacgagacaacttgattta
gccgttcaggaagctgaaacggagaaagaaaatgcacttgaagcgcgtcgtgtgctggga
caagcacaacgcaattcacagcggttcgaaaaacaagttgcagatttgagcaaacaagtt
tgtttgcttattcgtgaagttgaagagcttcgaggcaacagattacgcgaagaacccgtt
gatgacgaccaggtgtcgtccagcgaaggatcagctgcctcagtaattagccgtcattta
gtaacgttccgcgacgtcgaagagcttcagcagaaaaatcagatgttgctaacagccctt
cgtgaagtaaccgagaaacaggatgcagcggaacaaggcgaaatcgatatcaaaacagcc
aaaatccagcaggctttagaaaatgctttgtcggaggttgaacacctacgagatacccga
aggcgccatgaggaactgatggaaagcgtcatccagcagcgtgatatgtacagcacacta
ctacaggaagccggattgggagattctcggtcaccgtccaagttccgcaatgtggtcgca
tctactccggctcctgttagacaagagagtactcgatcaggggacaccgaaacacagctt
aatgagactaaacagcgtttagaagaacaagaaatgaaacttcagaacgtcatcaaggaa
aagaaggagagggaaacagctttagagagtcaaatccagacccttcaagatcagttaact
gaattaagagctcagaatgttcgactgagcacacacaaagaatacgcagatgcaaaggaa
aaattattgcaggggaatctcgattcatgtaagaaacaacttaacgccttagaagacaag
aacaagatatacgcatgcacagttgccaaacacgaacaaagcattgctattttacgagat
gaagctatgaatgcccaacagcaattggctcgtgccgaagtaaccatttcaatgcttcaa
gaagagaagcaactgctcaaagatgctgaacaacgacttctagtagaaagaaacgcgttg
ttaagtgagcgacgtagccaaagccttctgcatgccaacttggaatcgatcaaattaaat
ttagaacgtggtgaaagcgagacccatatgcgtttacagaataccgtcacatctttggaa
caacaaatcgaattactccggaagaaactcgatcttgaggagcaacgttatcgagagaca
gttaaatcctttgaagataaaatattggccgatcaagcccttttgaaagctgccgaaggg
aaagccgctaacgctgaagcacagttagttgtagctagagagcggttagcggcagcagaa
tcgcgaacaggattaacatctcccacaagaaaaggacaggtgacgcgcttgctttcaact
acgccaacatccggggatgtcgcgactgatagtgatcttgttggagatctacgagcccag
ctcgcagaagcccgtatggaaacgagcaagtaccaggagcagttagagctggttcgtcag
caatctgaacaatatcgctcaattgccgatagcatggaagaacagcttactaaaagcaac
gttgccagccttgcattcaagcaggaaactgagcaacttttggcaaaattaaatgaagaa
cgttccgaactagcgcgcaatcttcaagaaactcaggataaacttaaggctctagaagag
ggagcggcacagttgggccgcgctacggctcaccagtcggaagaggtttcgaatcgaatt
acacaactcgaagccaatgtggcctcattgactgaccaggtaaggttggctgaggagtcg
gaagcaaaagcccgtcaagaatcgttggatcaagtgaaacatgccaaagatgcgcaagaa
aaatacgaaagggaactgatgcagcatgccgctgatgtggaacagctaaatgccgtccgt
gaacgagtagaacaaagccgctctcaattagcactcctccaacaaacttcagcgcgactt
gaggctgaacttgcaactggacgctctagttggcaagctcaaaaagaaatgttggagaag
gaagctagtgagaaggctcgacgctgctcagatttagacaaacaagttgatgtaatgcaa
caacaaattgtcacattaagttcacgcatggcagcagcaacacgttgccaggaaatagct
gtgaagacgcagagtggtgaggacggaaacacctcgcttaatacatccaccagcgaagaa
gatgttcgttctactgatcaattgctggagctcgttcgcttcctacgacgcgaaaaggag
attgccatttcgagatctgaagtgcaagaagccgaaacgcaacgtctgaagacgcaactg
gaacaagctgaacgcaatctgaatgaagcccagaccaacttacagcaagagagagaacgt
tctgccacgtctgcgttgacgtcggagaaacatactgaaatgcttcgcagattggaaaca
ctaaacgcacttacagacagcaaccggttgttgagagatgaacgaggtggccttgttagt
cgggttgaagaactgacggttaaagtcagtgctctagaggcagaattggaacctttgcgt
tctaacaaccacgactccgccagccgactggaggagctgtctgccgagaatgccactctg
cgtaagcaagtagtggcatggcggactagaaccaacgcgttgcaagaacgagctggccga
gctacagccgacgagatcaaaaagctgcagtctgacaaagagcttgttcagaagcaattg
gaacaaatccaaaaacaggtcgaacaaatgaaggaggcccagacaaaaacagctaaccaa
ttgacagaaacccagcgagtgaatactcagttggtcacggcacaacaaaaattacaagaa
gaagctcgtttggccaaggaagaatcacagaaagctcagtctgaaatgaccacggctctt
gccaaacgtgatgaagaaacggcgaaagcggctgatcaagccaatcaattgcgccgtatt
gctcgcaaatacaaaacgcagtatgaagagcttaaagtcacccacgataaattagtttca
gataaagaagcgtcagcatctgcggaatctgcgcccgcccaagacgaagctacaagtgct
gcaacaacagaggccgcaacagccgcagctgctggacaggctacgaaaattcaggaactg
gaagaacagatagcgcaaatggcagctgagctagagaaaattaaacaagataatgaagct
atgcgtctaaaggatgaaaaggcaacgaacgttctcaaaactactcgacaaaaattggct
tcactaccaacccttataaaagagaaagaaacccttgttgcgcagctagaagaagcgcgt
gccaaaattgaaagtctcgaacagagtagcgaagaactcaatgttcgttctgccgctctg
cgatcccaattagaaggccgccttagtcggttagaaagagagaacagtgagctgctcgca
agtaaacaagcacttgagaccgagttggaggctttgaagcaacgcattcctgttttgcag
cgccatattgaggcttaccagaagcagctagttttatttcagcaaaggcaacaaaaacaa
caagttcaacagacgacacaacaagtgccaaataaaccacctaccactgaaaaaacagtg
tctgaaaatccacccactgcaaacatcaagcccatggcatcgggaactgctgtaacccct
cagcgtcctccggttagttccagtcctggacaagtagcatcaggaccgaatcaggtgcac
cgtactacaccaactgcaagcattcgtccaatggcaatgactacccgcacgatggcagtg
ccacccacctcagttgcggtatctcctatggcgccaccgccgatcgctatcgcaccccca
aatcccgtggtcccaacgactccccctgtgaaccaagaagaaccagttgccggaccgagt
ttcattcatggtggtgacgaaggtccatcttcgagtggtgaggatcggtcgaaaaaaagg
gcgcgtactacagaagaatcgccttccaatgaggacactagtgtcaagcggacccggtta
tctgagcagacggaagaagaagttgaagtcattgatttacaagaagagccagccgaagaa
tctgcagaagactatgccacacgcaccggcgagatggagttggtgatcgagtatgaagaa
cagccgcaagaggatcatgaagtggaagaggaagaggtcgaagaaggtctcattgagagc
gaggaagaagaaatggttgaaactgtcgatcccgaagaagaggatcaagaagaagaatgt
gacgaaatcgttgttgaagagcagcgggaagatgtcgaagaaccaactcaacctgaacaa
gagtcagaagctgtattgacgattactgaagaggaaacagtttcggttactgtccaggaa
cctgttgaggaagctgttgttcaacaagtcccagcggaagatgtcgaatcggaagctttt
gtacctgttaataccaatgaagctgcttcttctgatgtgtcacaagccaccattcgtcca
ccgcccagagaagaccgtctaccatcattcggtagaaatactttagcctttgaagatgta
ggtgacgatggcatcgttcccagcacccccgttctcctgcgaccacgaacaaacgatggt
tttgcagaagctgtgagttcacctcaagtcaatacgcgtttcgtatttggaactgttccc
gaattgtcggccggaactagtcacagcaatgctccatcccatttggaatcgcaaggtatg
gaagatacacggatggacttgtctcaacttgaagagaattcgggtcgtagtgtaccatct
actccgcttcaagtatctccgcatgatgaattgccagctgttaatcaaggagaagaagcg
tcagtcgttcctgcaggcaataccgaagaacaaggagatttcgagggaggtcctgatttg
gaaggagacgctgccgctgaaattgaccttctcggggaagacgatcaagacaccgcggac
aatgaacaatcaaccagccaggtgggacaggatccagtgccttcgactacaacagaagat
gattcgttgtccgaagcttcggaagtttcgaacattcaatcagctgaagggtctagccaa
ccgatgacgacacaagcctcaccgacatcttctacgtcttcccctagtgctcggggagtt
ctgactcggcgagcgtcaatggccggtttcccacgcggacgaggagtgaatcgggaagat
tcacgattatcggctgcacaaaacactaatcgccctgttcccatcacctggacaccgaat
ccagcacaacccgcgtacactcctaatcctgcacgtgtttttcgacgagttcccactgca
tcgacatcgccagcacctggcgcaccggcggtaatcacggagctaagtgctgtagccacg
acctctccagtaccaccggttatgcgaggacgtggagcaacacgtggccggccacgatcg
agagccccaaggcgaatgtaa
DBGET
integrated database retrieval system
