Daphnia carinata: 130694802
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Entry
130694802 CDS
T11669
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B-B-like isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
dcar Daphnia carinata
Brite
KEGG Orthology (KO) [BR:
dcar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dcar03036
]
130694802
03400 DNA repair and recombination proteins [BR:
dcar03400
]
130694802
Chromosome and associated proteins [BR:
dcar03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
130694802
DNA repair and recombination proteins [BR:
dcar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
130694802
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
HEAT_GCN1
CTD1
Motif
Other DBs
NCBI-GeneID:
130694802
NCBI-ProteinID:
XP_057373894
LinkDB
All DBs
Position
4:complement(906946..912588)
Genome browser
AA seq
1363 aa
AA seq
DB search
MPGGGDTVTIIYPQGCKEVTEDLTPDELIRRLKTLAHTFQSMGQEEGAYQEFVPLALHLA
DDFFLQHHSRDVQLLIACCIADVLRVYAPDAPYTDPEQVKGIFLFLIRQLGGLKDPKDPA
FKRYFYLLENLAYVKSFNMCFDLEDCQEIFCELFKLIFKIVNDEHSGKVKSFMLDILCPL
ITESDSVSNELLDIILSNIVEPLKSQRKNAYKLARELLLKCSDTLEPYIQAFFNQVLILG
KEDKQLFIATKVYDLIYELYHVCSRVLLSVLPQLEFKLKSPDEQERMGCVSLLARMFSEK
DSQLATQHRQLWRAFLGRFNDISVAIRTKCVQYSMHFLLNHPELRQDVTETLKLRQHDAE
ESVRYEVVTAIVATAKRDFSIVSDSEDLVNFVKERTLDKKFKIRKEALTGLAMIYKTFLG
DPDVPETTKKAVTWIKDKILHGYYMTGLEDRLLVERLLNTCLVPYQLPADVRMKKLYYLY
ATIDENATKSFIELQKSQATVRKAVSDLTEVYNQLEPGENRDKEITTRVAQLSKYLPDPI
KAAEFIHKFAVNLASDSSMLQLLETVVNPEVSCKECAEAGTQLLKKLGQPVMTNLYYNTV
KLLMERISSVLIDKDAVTHLVQYVEACLRRDEGTMAEEIGIEPETAGEKGLRLLFVLAFG
FPAHFMSEDVLTRLVNILSLDSQDHSVSAMVLCILTFVGKYRPLEAQFRDIVSQLIPICE
RLATEGTTKQAKHAMRCLHVNITNHEQVFSKILESLKDNLTTSSPHCRTSIVTLGHMALL
LPDRFTIQIKNIVSRKIVKELLLKNHGETQPISSDISNDEWCEEDQLPEETRCKVEAMKM
MARWLIGLKNDVMSAQKTFRMLTAFIQHRGDLFDGGRIGKTEMAWLRLSAGTAMLKICEQ
KGVGDQFTVDQFYSLSLLIADDMPEVRERFTAKLHRGLYRMPLRSLPLDFMGVYALAGTE
EDKRIKAIIRRSMLADISKRRDYQRELQMSGSMERMADKLPYILPDYMLVYAVPILAHDP
EFTSHTNTEQLLRIRQCLWFVLEPLMNKHENYCFGFYKALIERMKNHRDALKPEDEESNA
KLWAVCDLAMGLIMQKTTSFEMKDYPTQPRIPSMYFRTHDDPNFLNTKIYLPPELQIAPP
KKASTVGGGGVGSGLVKVSALKSFSGASIRGKGGRRGRPPKQDLDDVESDEEPEESFDQT
VMQSASNTDESMATRRSSRIRTSAPHTSIGANSGSEDSQEATTPISKEKPKTTGAKITSY
FSPKQRAAAAASATVDSDNSNMSQNNGTEDQSEPTEQPLESLPKRRGRPPRNPAMNEKEV
ESSSAAEEETEAEVKSRKRSKEEEKDTTVVTPARKSARLAKPN
NT seq
4092 nt
NT seq
+upstream
nt +downstream
nt
atgcctggtggaggcgataccgtgaccataatctacccacaagggtgtaaagaagtcaca
gaagatcttactcctgatgaacttataagaagacttaagactttagcacatactttccag
tccatggggcaagaagaaggtgcataccaggaatttgtaccacttgctctccatttggct
gatgatttttttctccagcatcattcaagagatgtccaattgctgattgcttgttgtatt
gctgatgttttacgagtctatgctccagatgctccctacacagatccagagcaagtcaaa
ggaattttcctttttctaattcgtcaattaggggggctgaaggatcctaaagatcctgcc
ttcaaacgttatttctatctgcttgaaaatcttgcatatgtcaagtccttcaacatgtgc
tttgaccttgaggattgccaagaaatcttctgtgagctctttaaactcatcttcaaaatt
gtcaatgatgaacattctggtaaagtgaagagtttcatgcttgatattttatgcccgctc
ataaccgagtcggattcggtgtctaatgagctgctggatataatattatcgaatattgtt
gaaccgctaaaatctcaacggaaaaatgcatacaaacttgcaagggaactcctattaaag
tgtagcgatactctggaaccctatatccaagcgtttttcaaccaagttctaattcttggg
aaagaggacaagcagctctttattgctacaaaggtgtacgacttgatttatgagttgtat
catgtttgttccagagtgcttttgtcagtcttgccgcagttggaatttaaattgaagagc
cctgatgagcaagagagaatgggctgcgtctctcttcttgccagaatgttttcagaaaaa
gattctcaacttgccacccaacatcgtcagctctggcgagcattccttgggagatttaat
gacatcagcgtagccattcgtacgaagtgtgtccaatattctatgcatttcttgctaaac
catcctgaattgaggcaagatgtaacagaaactttaaagctacgccagcatgacgcagag
gaatctgttcggtacgaggttgtgacggcaatagttgccacggccaagcgggacttctca
atagtttcagacagtgaggaccttgtgaattttgttaaagaacggacattggacaagaag
ttcaaaattcgaaaggaggccttaacaggattagctatgatttataagacatttttgggt
gatcctgatgttccagaaaccacaaaaaaagcagtgacctggattaaagacaagatcttg
catggatattacatgactggactcgaagatcggctccttgttgaacgcctgctcaatact
tgtcttgtcccgtatcagttaccagccgacgtcagaatgaaaaaattgtattacttgtac
gctactatcgacgaaaacgctaccaaatcattcatagaacttcagaaaagtcaagccacg
gttcggaaagctgtgtcagacttgacagaagtttacaaccaacttgaaccaggcgaaaac
cgagacaaggaaattaccaccagagttgcacaattgtccaagtaccttccagatccaatc
aaagcggctgaattcattcacaagtttgctgtcaatttggcgagcgatagcagtatgctt
caattactggaaaccgtggttaatccggaagtaagctgtaaggaatgtgctgaagccgga
acacagctattgaaaaagctgggtcaacccgttatgaccaatctgtattacaacaccgtg
aagctactaatggagcggatttcttcagttctcattgacaaagatgctgttactcatttg
gttcaatatgtggaagcctgtttgaggcgcgacgaaggtacgatggctgaagaaatcggt
atcgaaccggaaacagccggtgaaaaggggctccgccttctgtttgtccttgctttcgga
tttccagcgcactttatgtcggaggacgttttaactcgacttgtgaatattctatcgctt
gatagtcaagatcatagtgttagtgccatggtattgtgtatcctcactttcgttggaaag
tatcgacctttagaggctcagttccgagacattgtcagtcagttaatcccaatctgcgaa
cgtttggcaactgaaggcactacaaaacaagctaaacatgccatgcgttgcctccacgtg
aacattacaaatcacgaacaggtgttctcgaaaattttggagtcgttaaaggacaacttg
actacgtcttcccctcactgtcgtacctcaatcgtgacccttggtcacatggcgctttta
cttcctgaccgctttactattcaaattaaaaacatagtatccagaaaaatcgttaaagag
ttgttgcttaagaatcatggagaaacacagcctatttcatccgatatatcaaatgacgaa
tggtgtgaggaagatcaacttccagaagagacacgctgcaaagtggaagccatgaaaatg
atggctagatggttaattggtttgaaaaacgatgtcatgtcagcacagaaaacgtttagg
atgttgacagctttcatccaacaccgcggagaccttttcgacggtggaagaatcgggaaa
accgaaatggcttggctgagattgtctgccggaaccgctatgttgaaaatctgtgaacag
aaaggagttggcgatcaattcacggttgatcagttctacagtctttctcttctgatcgct
gatgacatgccggaagtgcgcgaacgctttaccgcaaagctacaccgaggcctctatcga
atgcctcttcgttctttgcctcttgacttcatgggggtttacgcattggcgggaactgaa
gaagacaaacgtattaaagcaattattcgccgttctatgctggcagatatctcgaaacgt
cgggattaccagagagaactacagatgtctgggagtatggagcgaatggccgataagttg
ccatacattttgcccgactatatgttggtctatgcagtgcctatccttgctcatgatccg
gaatttacaagccacactaacactgagcaattactgcgtattcgccaatgtctgtggttc
gttttggagcctctaatgaacaagcatgaaaattattgctttggcttttataaagcgcta
atagagcgtatgaaaaatcatcgcgatgctcttaaacctgaagatgaagaaagcaatgca
aaactgtgggctgtttgcgatttggcgatgggtttaatcatgcaaaaaacaaccagtttt
gaaatgaaagactaccctactcaaccacgaatcccttcgatgtatttcaggactcatgat
gatcccaattttttaaacacgaagatctatttgccacccgagttacaaatagctcctccg
aagaaagcgagtacagttggcggagggggtgttggaagtggactggttaaggtatctgca
ttgaaatccttctcgggagcaagcatacggggtaaaggtggaagaagaggtcgccctcca
aagcaagatcttgatgacgttgagtcagatgaagaacctgaagaatcttttgaccaaacc
gttatgcagtctgcctctaatacagatgaatccatggctactagacgatcttcacgtatt
cgtacatcagcaccgcacacttcgattggtgccaacagtgggtcagaagattcccaagaa
gcaaccacacctatttccaaagagaaaccgaaaacgacgggggctaaaataacttcctat
ttttcaccgaaacaacgggcggctgctgctgcatcagcaacagtggattctgataactct
aatatgtcacaaaacaatggaactgaagaccagtcggagcccacggaacagccgttagaa
tctcttccaaaacgtcgtggacggcctccccgcaacccagcaatgaatgaaaaagaagta
gagagtagttcagctgccgaagaagaaacagaggcggaagttaaatcgagaaagagaagt
aaagaagaagagaaagataccacggttgttacacctgctcggaagtccgcgcgattggcc
aaacccaattga
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