Daphnia carinata: 130702725
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Entry
130702725 CDS
T11669
Name
(RefSeq) replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
dcar Daphnia carinata
Pathway
dcar03030
DNA replication
dcar03410
Base excision repair
dcar03420
Nucleotide excision repair
dcar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dcar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
130702725
03410 Base excision repair
130702725
03420 Nucleotide excision repair
130702725
03430 Mismatch repair
130702725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dcar03032
]
130702725
03036 Chromosome and associated proteins [BR:
dcar03036
]
130702725
03400 DNA repair and recombination proteins [BR:
dcar03400
]
130702725
DNA replication proteins [BR:
dcar03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
130702725
DNA Replication Termination Factors
ELG1-RFC complex
130702725
Chromosome and associated proteins [BR:
dcar03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
130702725
DNA repair and recombination proteins [BR:
dcar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
130702725
Check point factors
HRAD17(Rad24)-RFC complex
130702725
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_14
nSTAND_NTPase5
AAA_16
RCF1-5-like_lid
AAA_lid_RFC1
nSTAND3
Mg_chelatase
Viral_helicase1
AAA_18
Rad17
MeaB
AAA_11
AAA_assoc_2
AAA_19
RuvB_N
NTPase_1
ABC_tran
AAA_5
ResIII
ATPase_2
AAA_24
MipZ
AAA_23
RNA_helicase
CbiA
AAA_7
SRP54
AAA_28
AAA_25
AAA_3
DnaB_C
AAA_30
FtsK_SpoIIIE
bpMoxR
AAA_2
Castor_Poll_mid
DUF6933
Motif
Other DBs
NCBI-GeneID:
130702725
NCBI-ProteinID:
XP_057380323
LinkDB
All DBs
Position
1:complement(8220944..8222952)
Genome browser
AA seq
344 aa
AA seq
DB search
MEIDVKENSLSVDPTKISGKKDNMPWVEKYRPVTFKEIVGNEDAVGRLEVFAREGNTPNI
IIAGPPGVGKTTTILCLARTLLGQNYKDAVLELNASNERGIDIVRNKIKMFAQQKVTLPK
GRQKIIILDEADSMTEGAQQALRRTMELYSKTTRFALACNTSDKIIEPIQSRCAMIRYGK
LSDAQILAKMIEVCQLEHVSHTDDGLEAIVFTAQGDLRQALNNLQATVQGFGHVNSENVF
KVCDEPHPMLIKDMIDHCVKGNIDDAYTIMAHLYELGYAAEDIISSVFRVCRNHTLPEYI
MLEFIQEIGLTHMKIAQGLGSLLQMSGLLARLCKRVIAPEKFSM
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggaaatagacgttaaagaaaactccctgtcagtcgatccaacgaaaattagtgggaag
aaagacaatatgccatgggtagaaaagtatcgcccagtaactttcaaagaaattgttggc
aatgaagatgcagttggcagattggaagtttttgcaagagaagggaatactccgaatatc
ataattgctgggcctcctggtgtggggaaaacaaccacaattctttgcctagctcgcacc
ctgcttggacaaaactacaaagatgctgtattagaacttaatgcatcaaatgaaagagga
attgatattgtgaggaacaaaatcaaaatgtttgcccaacaaaaagttactttaccaaaa
ggcagacaaaaaataattatattggatgaagcagacagcatgactgaaggtgcccaacag
gctctccgacgtaccatggaactgtatagtaaaacaacgcggtttgcattggcctgtaat
actagtgataaaattatagagccgattcagagtcgatgcgccatgattagatatggaaaa
ttaagtgatgcgcaaattcttgcgaagatgatagaagtttgtcaactagaacatgtcagt
cacaccgatgatggactagaagcaattgtctttacggcacaaggggacttacgacaggca
ttaaacaatctgcaggcaacagtacaaggctttggtcacgtaaacagtgaaaatgttttt
aaggtatgcgatgaacctcatcccatgttaatcaaagacatgattgaccactgcgtaaaa
ggaaatatcgacgatgcctatacgattatggcgcatttgtacgaattgggatatgcagct
gaagacatcatatccagcgtgtttcgagtgtgccgaaatcacacccttccagaatacatt
atgcttgagtttatccaggaaatagggttaacgcacatgaaaatagctcaagggctgggt
tcgttactgcaaatgtctggcttgcttgcgcgattgtgcaagcgagtgatcgcccctgaa
aagttttccatgtga
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