Daphnia carinata: 130703706
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Entry
130703706 CDS
T11669
Name
(RefSeq) transcription factor Sox-21-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
dcar Daphnia carinata
Brite
KEGG Orthology (KO) [BR:
dcar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dcar03000
]
130703706
Transcription factors [BR:
dcar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
130703706
SSDB
Ortholog
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
130703706
NCBI-ProteinID:
XP_057381138
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All DBs
Position
7:complement(8592930..8595152)
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AA seq
395 aa
AA seq
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MMDMSVMQSSPGLLMAHHQQQQHHHHQQQQAVAMSMMQQQQTSPGHGKNAGASVGLSGVL
SDHIKRPMNAFMVWSRLQRRKIAQDNPKMHNSEISKRLGAEWKLLNEDEKRPFIDEAKRL
RALHMKEHPDYKYRPRRKPKPSMANKTAAYSFPMPYSLGGMNPHHHAAAAGLDTLSWLSA
AQHAASVQAASVNSTLSATTTTTNSTTAGSLSSSTSSVASATPSLDLDKSRLFGFPSPYG
THQHHYYGMAGLPGMPGLAGLAGLPNLNANNNGHRMSPDSNSPVSRMDGFGMKGSPSPVA
SVNSTSGGNGSNSNNGCVVSTSAGIPQHHQQQQQSPAALYSSLMYTKASAAAAASYHQAA
QAAAAAAGMQYPVAPAGYPSLDQLAGLRRPVPVLY
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgatggacatgtcagttatgcagtcttctccaggcctcttgatggctcaccatcagcaa
cagcaacatcatcatcatcagcaacagcaagctgttgccatgagcatgatgcagcaacaa
caaacatcgcccggacacggcaagaatgccggcgcaagcgtaggcctgtccggcgttctt
tccgatcacatcaagaggcccatgaacgccttcatggtctggtctcgtcttcagcgccgc
aagatcgcgcaggacaatccgaaaatgcacaactcggaaatatccaaaagactcggtgcc
gaatggaagttgttaaacgaagacgaaaagcggccgtttatcgacgaggccaaacgtttg
agagcgttgcatatgaaggagcatccggactacaaataccgaccccgtcgcaaacccaag
cccagcatggccaacaaaacggcggcctattcgttcccgatgccctactcgctcggcggt
atgaacccgcatcatcacgcagccgccgccggactagacaccctttcttggctatcggcc
gctcagcacgccgcctccgttcaagccgccagcgtcaactcgactttatcggccacaacg
acgaccaccaacagcacgacggccggcagtttgtcgtcgtctacttcatctgttgcgtcg
gcaactccttcgctcgatttggacaagagccgcttgtttggattcccttcgccgtacggc
actcaccagcaccactattacggtatggctggcctgccaggaatgcccggcttggctggc
ttggccggacttcccaatctcaacgcaaataataacggacacaggatgtcaccggacagc
aattcgcccgtcagtcgaatggacggattcggtatgaaaggatcaccgtcgccagttgcg
tccgtcaattcgacatccggcggcaatggaagtaatagcaacaacggctgcgtcgtgagt
acgtcggccggaatccctcaacatcatcaacaacagcagcaatcaccggccgctctctat
tcgtcattgatgtacaccaaggctagcgccgcagccgccgcttcgtaccaccaggcggcc
caagcggccgctgccgccgccggtatgcaatatcctgtcgctccggctggatatccctcc
ctagatcaactagctggcctacgaagacccgtacccgttctctactga
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