Solidesulfovibrio carbinolicus: C3Y92_02425
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Entry
C3Y92_02425 CDS
T06503
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
dcb
Solidesulfovibrio carbinolicus
Pathway
dcb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dcb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C3Y92_02425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dcb03400
]
C3Y92_02425
Enzymes [BR:
dcb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
C3Y92_02425
DNA repair and recombination proteins [BR:
dcb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C3Y92_02425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
HHH_5
AAA_11
PIF1
NAT10_TcmA_helicase
AAA_22
UvrD-helicase
nSTAND3
SLFN-g3_helicase
AAA_28
HHH
AAA_16
PhoH
T2SSE
ABC_tran
NPHP3_N
AAA
ATPase_2
Mg_chelatase
DEAD
AAA_29
RsgA_GTPase
TsaE
NB-ARC
AAA_23
Rad17
HHH_2
Zeta_toxin
TrwB_AAD_bind
AAA_24
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
QAZ66154
UniProt:
A0A4P6HIE8
LinkDB
All DBs
Position
550310..552487
Genome browser
AA seq
725 aa
AA seq
DB search
MSETRKEFSDLSGQIERVTFTSEESGYTIAKVKVYGRRELVTVVGNILCPTPGEIIKMKG
EWSNHPKFGEQFKLAYYKTTTPASVHGIEKYLGSGLIKGIGPVMAKRIVKLFGEATLDVI
EADIQKLIEVPGIGSKRVGMIGQAWEEQKEIRSVMLFLQTHGVSSGYATKIYKQYKNESI
AVVQDNPYRLAHDIFGIGFVTADKIAQKLGFDNNSPLRAEAGILYVLHQLSDEGHVFYPQ
DPLIEKAIEILEVEPGVLMDALGRLAREQKIVVETLDQPSGPVEAVYLAKFNLSEKQVAA
RLKALQTAAKGVRAIDDEKAVEWVQEKLSMTLAAKQVEAVKAAATSKVLVITGGPGTGKT
TIIRAILKIFSAITHHILLAAPTGRAAKRMSEATGHEAKTLHRLLEYSMQKGGFQKNEDH
PLDCELIVVDEASMIDLILMHHLLKAIPRPATLILVGDVDQLPSVGAGNVLKDVIASGAI
PVVELNEIFRQAQESSIIVNAHRINKGVMPDTRPRKEADDFYFVEEEEPERALQRIIQLV
RERIPTRFGLDPINQVQVLTPMNRGVVGTTNLNLALQAALNPNGAEVVRGGRTYRVGDKV
MQIKNDYDREVFNGDLGRIIGIDEEEQELTVDIDGRSIVYDFSGLDELVLAYGVSIHKSQ
GSEYPAIVIPVLIQHYVMLQRNLLYTGVTRGKKLVVIVGTKKALGIAVRNNKTISRHTYL
ASRLN
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaacgcgtaaagaattttctgatctgagtggccaaatagagagggtcactttt
accagcgaagagagtggctacaccattgctaaggtcaaggtgtatggccgtcgtgaactc
gtgaccgtcgtaggcaatattttgtgccccactccgggtgagatcatcaagatgaagggg
gagtggtccaatcaccccaagttcggcgagcagttcaaacttgcatattataagacgact
acccctgcctccgtccacggaattgagaagtacctcggatctggtctcatcaagggcatc
ggcccggttatggccaagcgcatcgtcaagctgttcggagaggccaccctggacgtcatt
gaagcagacatccagaagcttatcgaggtgccgggcatcggctccaaacgtgttgggatg
attggccaggcctgggaagagcagaaagaaattcggtctgtcatgctgttcctccagacc
cacggggtcagttccggatacgcgacgaaaatctacaagcagtacaaaaacgaatccatt
gccgtggttcaggataatccttaccgactggctcacgacattttcggcatcggcttcgtc
accgcagacaaaatcgcgcagaagctcggcttcgataataattcgccattacgggccgag
gccggcatcctgtatgtccttcaccagctttcggatgaagggcatgtcttttatccccaa
gaccccttgatcgaaaaggccatcgagattctggaagtggagccaggagttttgatggat
gcccttggccggcttgcaagggagcagaagatcgtcgtcgaaacgctggaccagcctagt
ggcccggtagaggctgtctaccttgccaagttcaacctttccgagaagcaggtggcggcc
aggctaaaagctctacagaccgctgccaagggtgtccgtgccattgacgatgagaaggcc
gtagagtgggtccaggaaaagctgtccatgaccctggccgcaaagcaggtggaagcggtc
aaggccgccgccacgagcaaggtcctggtcattactggcggaccggggacgggcaaaacg
acaattatccgagccatcctgaaaatcttctcagcgatcacccatcatatcttgttggcc
gccccgactggccgggcggcgaagcgtatgtcggaggccacagggcatgaagcgaaaacg
ctccacaggctgcttgagtattccatgcagaaaggcgggttccagaagaacgaggatcat
ccgctcgattgcgagttgattgtcgtggacgaggcgtccatgattgacctgatcctaatg
caccacctgctcaaggcgattccaaggccggccactctcattttggttggcgacgtggac
cagttgccctcggtaggggcgggaaatgtgctcaaggacgtgatcgcctctggagccatc
ccggtcgtggagttgaacgaaattttccggcaggctcaggagtcctccatcattgtcaac
gctcacaggatcaacaagggcgtgatgcctgacacccggcctaggaaagaagctgacgac
ttttactttgtcgaggaagaagagccggaaagggctttgcagaggatcatccaactggtt
cgagagcgaatcccgacgcggtttgggctcgaccccatcaatcaggtccaggtgctgacg
ccgatgaaccgaggggttgttgggacaaccaacttgaatttggcactccaggccgctttg
aatcccaatggcgcggaggtggttcgtggcgggcgcacttatcgggtcggggacaaggtc
atgcagatcaaaaatgactatgatcgggaggttttcaacggggatcttggcagaatcatt
gggattgatgaggaagagcaggaactcaccgtcgacattgacggcaggtctatcgtgtac
gatttctctggacttgatgagcttgttctggcgtacggcgtttcgatccataagtcccaa
ggttcggagtacccagcgattgtgatccctgtcctaattcagcactatgtgatgcttcaa
cgaaatttgctgtatactggggttactcgtgggaagaagctcgttgtcatcgtgggtact
aagaaagctctaggaattgctgtcagaaacaacaagacgatttctcgccatacatattta
gctagtaggttaaactga
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