Solidesulfovibrio carbinolicus: C3Y92_06310
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Entry
C3Y92_06310 CDS
T06503
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
dcb
Solidesulfovibrio carbinolicus
Pathway
dcb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dcb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C3Y92_06310 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcb03019
]
C3Y92_06310 (pnp)
03016 Transfer RNA biogenesis [BR:
dcb03016
]
C3Y92_06310 (pnp)
Enzymes [BR:
dcb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
C3Y92_06310 (pnp)
Messenger RNA biogenesis [BR:
dcb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
C3Y92_06310 (pnp)
Transfer RNA biogenesis [BR:
dcb03016
]
Prokaryotic type
tRNA degradation factors
C3Y92_06310 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
S1_RRP5
KH_2
DUF3016
Motif
Other DBs
NCBI-ProteinID:
QAZ66872
UniProt:
A0A4V0YQN0
LinkDB
All DBs
Position
complement(1446944..1449193)
Genome browser
AA seq
749 aa
AA seq
DB search
MTMTFSPIRLEAAIGDKTVTIETGRLANQADGAVWIQSGGTVVLVTACTQALAEEKGFFP
LVVDYQEMAYAAGRIPGSYFRREIGRPSEREVLVCRLIDRPCRPLFPKGFRDEVQIIATV
LSADGEVEPDVLALTGASAALHLSKIPFQGPIAGGRVGYIDGQFVLNPTVAQIAAGTDLN
LVFAASRDAVVMVEGAGRFVSEDLLADALEFGHKAVMPLLDLQEQLREKAGKAKIAFTPP
APLVELEAVVREAGEAKLKEAFTIKEKMARRDARRAVKAAVLEAVVAAFPDTPIYKMKAG
EVLEAMEKKLLRALIKDTGIRLDGRNVTTVRPIGIEVGVLPRTHGSALFARGETKALCVA
TLGSTGDEQKIETLNGETYKRFMLHYNFPPYCVGEVKMLRGPSRRDIGHGALAERSILPV
LPGPEDFPFTMRVVSQVLESNGSSSMASVAGASLALMDAGVPIKAPVAGIAMGLIKEGDD
FLVLTDILGDEDAMGDMDFKVAGTADGVTGIQMDIKITGIPQDVMRQALYQAKEARVHIL
GRMAAVLAEPRPELSALAPQLAVVHINPEKIREVIGPGGKNIKAMTAETGASIDIEDTGK
ISIFAPTLESLEKAKARVLYYDQHADVGANYKGRVIKIIECGVIVEILPGLEGLVHVSQL
DVERVASPADVVKMGQELEVKVLDVEPTGRVRLSRKAVMNEERGIPYDPADYAKTAGPRR
DGGDRRGPRRDDRGPRRDDRGGRERGPRD
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgacgttttcccccatccggcttgaagccgccatcggcgacaagaccgtgacc
atcgaaaccggccgcctggccaaccaggccgacggcgccgtctggatccagtccggcggc
acggtggtgctcgtcaccgcctgcacccaggccctggccgaggaaaaaggctttttcccc
ctggtcgtcgactaccaggaaatggcctacgccgccggccgcatcccgggctcctacttc
cgccgcgaaatcggccgcccctccgagcgcgaggtgctggtgtgccggctcatcgaccgc
ccctgccggccgcttttcccgaagggcttccgtgacgaagtccagatcatcgccacggtg
ctgtccgccgacggcgaggtcgaacccgacgttctggccctgaccggcgcgtccgccgct
ttgcacctctccaagatccccttccagggtcccatcgccggcggccgggtgggctacatc
gacggccagtttgtcctcaaccccaccgtggcccagatcgcggccggcacggacctgaac
ctggtcttcgccgcctcccgtgacgccgtggtcatggtcgaaggcgcgggacgcttcgtc
tccgaagacctcctggccgacgccctggaattcggccacaaggccgtgatgccgctgctc
gaccttcaggagcagctgcgcgaaaaggccggcaaggccaagatcgccttcaccccgccg
gcccccctggtcgagctggaagccgtggtgcgcgaagccggcgaagccaagctcaaggaa
gctttcaccatcaaggaaaagatggcccgccgcgacgcccgccgcgccgtcaaggccgcc
gtcctcgaagccgtggtcgccgccttcccggacacccccatctacaagatgaaggccggc
gaagtccttgaggccatggaaaagaaactgctgcgcgccctgatcaaggacaccggcatc
cgcctcgacggccgcaacgtcaccacggtgcgccccatcggcatcgaagtgggcgtgctg
ccgcgcacccatggctcggccctgtttgcccgtggcgagaccaaggccctgtgcgtggcc
accctgggttccaccggcgacgagcagaagatcgagacgcttaacggcgagacgtacaag
cgtttcatgctccactacaacttcccgccttactgcgtgggcgaagtcaaaatgctgcgc
ggcccgtcgcgtcgggacatcggccacggcgccctggccgagcggtccatcctgcccgtg
ctgcccggccccgaagacttccccttcaccatgcgcgtggtctcccaggtcctggagtcc
aacggctcctcgtccatggcctcggtggccggcgcgtcgttggcgctcatggacgccggc
gtgcccatcaaggccccggtggccggcatcgccatgggactcatcaaggaaggcgacgac
ttcctggtcctgaccgacatcctcggcgacgaggacgccatgggcgacatggacttcaag
gtggccggcaccgccgacggcgtcaccggcatccagatggacatcaagatcaccggcatc
ccccaggacgtcatgcgccaggcgctctatcaggccaaggaagcccgcgtccacatcctg
ggccgcatggccgccgtgttggccgagccgcgccccgaactgtcggccctggccccgcag
ctggccgtggtgcacatcaacccggaaaagatccgcgaagtgatcggacctggcggcaag
aacatcaaggccatgaccgccgagaccggcgcatccatcgacatcgaggacacgggcaag
atctccatcttcgccccgaccttggagtccctggaaaaggccaaggcccgggtgctctac
tatgaccagcacgccgacgtcggcgccaactacaagggccgggtcatcaagatcatcgag
tgcggcgtcatcgtcgagatcctgccgggcctcgaaggcctggtccacgtgtcccagctc
gacgtggagcgggtggccagcccggccgacgtggtcaagatgggccaggagcttgaggtc
aaggtgcttgacgtcgaacccactggccgcgtgcgcctgtcgcgcaaggccgtcatgaac
gaagagcgcggcatcccctacgatccggccgactacgccaagaccgccggcccgcgccgt
gacggcggcgaccggcgcggcccgcgtcgcgatgatcgcggcccgcgtcgcgacgaccgc
ggcggacgcgaacgcggcccccgcgactag
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