Solidesulfovibrio carbinolicus: C3Y92_07550
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Entry
C3Y92_07550 CDS
T06503
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dcb
Solidesulfovibrio carbinolicus
Pathway
dcb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dcb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C3Y92_07550 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcb03019
]
C3Y92_07550 (recQ)
03400 DNA repair and recombination proteins [BR:
dcb03400
]
C3Y92_07550 (recQ)
Enzymes [BR:
dcb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C3Y92_07550 (recQ)
Messenger RNA biogenesis [BR:
dcb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C3Y92_07550 (recQ)
DNA repair and recombination proteins [BR:
dcb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C3Y92_07550 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
HTH_40
Motif
Other DBs
NCBI-ProteinID:
QAZ67089
UniProt:
A0A4P6I067
LinkDB
All DBs
Position
1719128..1721359
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AA seq
743 aa
AA seq
DB search
MNTPRDVLKQVFGHDRFRGPQQAIVEHVLGGGDAVVLMPTGGGKSLCYQIPAILRPGTAI
VISPLIALMRDQVQTLTGLGVRAECLHSALPAGAAREVMARLRRGELDILYTAPERFMTQ
GFANLLAGLPLALFAIDEAHCVSQWGHDFRPEYLQLASIAHDFPGVPRMALTATADGPTR
ADILTRLELSQARIFATGFDRPNIRYLVEPKDQPRRRLLRFIREEHPGQSGIVYRLSRAK
TEDTAQWLTDNGIPALAYHAGLAPAERDRRQDRFMREEGLVMAATVAFGMGVDKPDVRFV
AHLDPPKSLEAYHQETGRAGRDGEPATALMLYSMNDFAALRRLIAPEGGEGTRTRIDLSK
LDALAGYCETDCCRRQTLLGYFGEARLEPCGNCDVCLDPSEPEDATVAAQKALSCVFRTG
QRFGAGHLVDVLLGRPTSQVERFNHREVSTFGIGADLTKDHWRAIYRRLAAMGALAPDEA
GHGGLVLTPLAWDILKGQRPFAMRLPKEPAPKERRKRSRGSAGEGGGKKSWVYDHLSTPE
DAALWDRLRSWRAETAKEAGVPPYVVFHDRTLLDVVLLKPQDPAGLAGAGGMGQAKIDKY
GQTLLNMLAEHYAAHGRAAPRPALPPESGALAPREPNDTAAKSLALFQELGSVEAVAKKR
ELAVSTIHGHLLAYVAWGKIEAAAVCGLPDELMARACETLSRLRREGVPGLGAAHEALGG
AVSFEALRCIDAELRAKARDGQE
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgaacacccctcgcgacgttctcaagcaggttttcggccacgaccgctttcgcggcccc
cagcaggccatcgtcgagcatgtgcttggcggcggcgacgccgtggtgctgatgcccacc
ggcggcggcaagtcgctgtgctaccagattccggccatcctgcgcccgggcacggccatc
gtcatttcgccgctcattgcgctcatgcgcgaccaagtgcaaacgctgaccggccttggc
gtgcgggccgagtgcctgcattcggccctgccggccggcgcggcccgggaggtcatggcc
aggctgcgccggggggagctcgacatcctctacaccgccccggagcggttcatgacccag
ggtttcgccaatctcctggccgggctgcccctggcccttttcgccattgacgaggcccac
tgcgtctcccagtgggggcatgatttccggccggaatatctgcagctggcctccatcgcc
cacgactttcccggcgtgccccgcatggcgctcacggccacggccgacggtccgacccgg
gccgacatcctcacgcgcctggaactgtcccaggcgcggattttcgccaccggcttcgac
cggcccaacatccgctatctggtcgaacccaaggaccagccccggcggcggcttctgcgg
tttatccgcgaggagcaccccggccagtccggcatcgtctaccgcctgtcccgggccaag
accgaggacacggcccagtggcttaccgacaacggcatcccggccctggcctaccatgcc
ggtctggccccggccgagcgcgaccgccggcaggaccggttcatgcgcgaggaaggtctg
gtcatggccgccaccgtggccttcggcatgggggtggacaagcccgacgtgcgcttcgtg
gcccatctcgatccgcccaagagcctggaggcctaccatcaggagaccggccgggccggg
cgcgacggcgaaccggccacggcgctgatgctctacagcatgaacgatttcgccgccctg
cgccggctgattgccccggaaggcggcgaaggcacgcgcacccgcatcgatctgtccaag
ctcgacgccctggccggctactgcgagaccgattgctgccgccgccagaccctgcttggg
tatttcggcgaggcccggcttgagccgtgcggcaactgcgacgtctgcctggacccgagc
gaacccgaggacgccaccgtggccgcccagaaggcgctgtcgtgcgtctttcgcaccggc
cagcgcttcggagccggccatctggtcgatgtgctgctcggccggccgaccagccaggtg
gaacgcttcaaccaccgcgaggtgagcacattcggcatcggcgcggacctgaccaaggac
cactggcgggccatctaccgccgcctggccgccatgggggccttggccccggacgaggcc
ggccatggggggctggtgctcacgccgctggcctgggatatcctcaaggggcagcggccc
tttgccatgcgcctgcccaaggagccagcgcccaaggagcggcgcaagcgctcccggggg
agtgccggggagggcggcggcaagaagagctgggtgtatgaccacctgtccacccccgag
gacgcggccctgtgggaccggctgcggtcctggcgggccgagacggccaaagaggccggc
gtgccgccttacgtggtcttccatgaccgtacgctgcttgacgttgtgctgcttaagccc
caggaccctgccgggctggccggggccggcggcatgggccaggccaagatcgacaaatac
ggccagacgctgcttaacatgctcgccgagcactacgccgcccacggccgggccgcgccg
cgtccggccctgccgcccgagtctggcgcgcttgctccccgggaacccaacgacacggcg
gccaagtccctggccctgtttcaggaactcggctcggtggaggcggtggccaaaaagcgc
gagctggccgtgtccaccatccatgggcatctgctggcctatgtggcctggggcaagatc
gaggcggcagccgtatgcggtttgccggacgagctcatggcccgggcgtgcgagaccctg
tcgcggctgcggcgcgagggcgttccgggcctaggcgccgcccacgaggccctgggcggc
gcggtctcgtttgaggccctgcgctgtatcgacgccgagctgcgggccaaggcccgggac
gggcaggagtga
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