Solidesulfovibrio carbinolicus: C3Y92_10085
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Entry
C3Y92_10085 CDS
T06503
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
dcb
Solidesulfovibrio carbinolicus
Pathway
dcb00541
Biosynthesis of various nucleotide sugars
dcb01100
Metabolic pathways
dcb01250
Biosynthesis of nucleotide sugars
Module
dcb_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
dcb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
C3Y92_10085 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
dcb01005
]
C3Y92_10085 (rfaD)
Enzymes [BR:
dcb01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
C3Y92_10085 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
dcb01005
]
Core region
C3Y92_10085 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
Motif
Other DBs
NCBI-ProteinID:
QAZ67556
UniProt:
A0A4P6HLI4
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All DBs
Position
2322871..2323842
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AA seq
323 aa
AA seq
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MIIVTGGAGFLGSALVWGLNAAGHDDILVVDNLGHGDKWKNLVNRRFADYLHKDAFLEAI
TGARDPFQATAVVHLGACSSTTETDAEYLMGNNTAYAKAVARYALEAGARLIVASSAATY
GDGSLGFDDDPDGLDTLKPLNMYGYSKHLFDLWARREGLLGQLASLKFFNVYGPNEYHKA
DMRSVVCKAYAQIGKTGRLSLFKSSRPDYPDGGQKRDFLYVKDAVAVMLWLLEHPEVGGV
YNVGSGAARTWNDLAAAVFSAMEKALAVDYIPMPEAIRGKYQYFTEAKMDRLHAAGCANP
FMTLEEGVADYVKGYLSQPDRYL
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgtcacgggcggggccggatttttgggcagcgcgctggtgtgggggctcaac
gccgccgggcacgacgacattttggtggtggacaacctggggcacggcgacaaatggaaa
aatctcgtcaatcgccgctttgccgactatctgcacaaggacgcctttttggaggccatc
acgggcgccagggatccgtttcaggccacggccgtggtccatctcggggcttgctcttcc
accaccgagaccgacgccgaatatctcatgggcaacaacacggcctatgccaaggccgtg
gcccgctatgccctggaagccggggcgcggttgatcgtggcctcctcggcggccacctat
ggcgacggcagccttggtttcgacgacgaccccgacggcctggacacgcttaagccgctg
aacatgtacggttattccaagcacctgtttgacttgtgggcgcgacgcgaagggttgctg
gggcaattggccagcctcaaatttttcaacgtctacggccccaacgaatatcacaaggcc
gacatgcgctccgtggtctgcaaggcctacgcccagatcggcaaaaccggccggctgtcg
ctttttaagtccagccggccggattatcccgacggcggccagaagcgggattttctgtac
gtcaaggacgccgtggccgtgatgttgtggcttctggagcatcccgaagtgggcggggtc
tacaatgtgggcagcggcgcggcccggacctggaacgatctggcggctgcggttttttcg
gccatggaaaaggccctggccgtggactacatccccatgcccgaggccatacgcggcaag
taccagtatttcaccgaggccaaaatggatcggctgcacgccgccggctgcgccaaccct
ttcatgaccctggaagagggcgtggccgactacgtgaagggctacctgtcccagcctgac
cgctatctgtag
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