Solidesulfovibrio carbinolicus: C3Y92_10115
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Entry
C3Y92_10115 CDS
T06503
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K03089
RNA polymerase sigma-32 factor
Organism
dcb
Solidesulfovibrio carbinolicus
Brite
KEGG Orthology (KO) [BR:
dcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dcb03021
]
C3Y92_10115
Transcription machinery [BR:
dcb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C3Y92_10115
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r1_2
Sigma70_r4
Sigma70_r3
HTH_28
LexA_DNA_bind
KORA
Motif
Other DBs
NCBI-ProteinID:
QAZ67561
UniProt:
A0A4P6HK86
LinkDB
All DBs
Position
complement(2330214..2331260)
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AA seq
348 aa
AA seq
DB search
MEIHDDQEISPDDTELDPVEPEVLDAADDDDAHEPTLDPDLEIDAADTFTLPAPRPRSEG
SLSTRDPLQLYLREIGKFPMLKPEEEQELARRVRDANDQKAAFRLISSHLRLVVKIAMDF
QRRWMQNVLDLIQEGNVGLMRAVTKFDPDKGIKFSYYAAYWIKAYILKYIMDNWRMVKIG
TTQAQRKLFYNLNKERQRLQSLGFDPSAAQLSQALNVTESDIVEMDQRLSGNDLSLDVSL
GDDTTSTRLDFLPALTPGIEEILAGDEISQQLDKHIQSIRPKLNEKEIELLDNRILSDSP
VTLREIGAKYGITRERVRQIESRLLEKLKDHLSKRIEDFSSDWIHKDE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggaaatccacgacgatcaagaaatttcccctgatgacacggaactcgacccggtcgag
cccgaggtgctcgacgccgccgacgacgacgacgcccacgaaccaaccctcgaccccgac
ctcgaaatagacgccgccgataccttcacgttgcccgcgccgcgcccccgctccgaaggg
tcgctctcgacccgtgatccgctccagctctatctgcgcgaaatcggcaagtttcccatg
ctcaagcctgaagaggagcaggaactggcccggcgggtacgcgatgccaatgatcaaaag
gcggcctttcgcctcatttcgtcccatctgcgcctggtggtcaagatcgccatggacttc
caacgccgctggatgcaaaacgtgctcgacctcatccaggaaggcaacgtcggcctcatg
cgggccgtgaccaagttcgacccggacaagggcatcaagttctcttattatgccgcctac
tggatcaaggcctacattctcaagtacatcatggacaactggcgcatggtcaagatcggg
accacccaggcccagcgcaaactgttctataatttgaacaaggagcgccagcgtctgcaa
agcctcggcttcgaccccagcgccgcccaactctcccaggccttaaacgtcacggaatcc
gacatcgtggagatggatcagcgcttaagcggcaacgatctgtccctggacgtgtccctt
ggcgacgacaccacgtccacgcggctggatttcctgccggcgctgacgcccggcatcgag
gagatcctggccggcgacgaaatctcgcagcagctcgacaagcacatccagtccatccgg
cccaaactcaacgagaaagagattgagctgctcgataaccgcatcctgtccgactctccc
gtgaccctgcgggaaatcggcgcgaaatacggcatcacccgggaacgggtgcgccagatc
gaatcccggctcctggaaaagctcaaggatcatctgtccaaacgcatcgaggatttttcc
tcggactggattcacaaggacgaatag
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