Solidesulfovibrio carbinolicus: C3Y92_12255
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Entry
C3Y92_12255 CDS
T06503
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02584
Nif-specific regulatory protein
Organism
dcb
Solidesulfovibrio carbinolicus
Pathway
dcb02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
dcb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C3Y92_12255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dcb03000
]
C3Y92_12255
Transcription factors [BR:
dcb03000
]
Prokaryotic type
Helix-turn-helix
Other families
C3Y92_12255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
GAF_2
AAA_5
AAA
GAF_3
AAA_16
Mg_chelatase
AAA_2
AAA_22
BrxC_BrxD
nSTAND3
AAA_7
ATPase
HTH_50
bpMoxR
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QAZ67951
UniProt:
A0A4P6HLD4
LinkDB
All DBs
Position
complement(2778107..2779666)
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AA seq
519 aa
AA seq
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MASKTLNLQLHCLQAISGIIDQALDLEQSLQDILRILAETLSMKRATITLVDRSTGKLVI
SVSQGLSPEEKRRGVYGLSEGVTGLIFQTAEPYVVPDIRHEPLFLNKTQSRKIERDRISF
VGVPIILHGQPIGVLNVDRLFGDEVDFNEDVAFLTVVATLIGQFMSLNEKYEAKVEVLKR
ENVSLKFKLSQESRGLYIVGRSLAMQDVQRQIEKVAPTRATVLLLGESGTGKTLIGRIIH
DLSERKDYPFIKVNCASIPENLLESELFGYEKGAFTGADQTKPGRFEEANKGTIFLDEIG
ELPLGLQAKLLRVLQDKEFERLGSNKTRQVDVRILAATNKDLAALAEVGAFRPDLYYRLN
VFPLQTPPLRERKEDIQSLIIHFLNKVSKEYARNLTFSTEALAVLKEYDWPGNVREMENL
VERLVILAENERIDADLIRPYLTIPSRDDSYEAEYGSEGEGAPSLKSLEKSVIIDALRRH
GGIQHKAARELGITPRQMGYRVKKFNLESMVAVQRVKNR
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaagaccctgaatctccagctgcattgcctccaggcaataagcggcatcatc
gaccaggccctggacctggagcagtcgctccaggacatcctgcgcatcctggccgagacg
ctttccatgaagcgggccaccatcactttggtggaccgctccacgggcaagctggtcatc
agcgtttcccaggggttgtctcccgaggagaagcggcgcggggtctacggcttaagcgag
ggcgtcaccggacttattttccagaccgccgagccgtacgtggtgccggacatccgccac
gagccgctgtttctcaacaagacccagtcgcgcaagatcgaacgcgaccgcatctccttt
gtcggcgtgcccatcatcctccacggccagcccatcggcgtgctcaatgtggaccggctt
tttggcgacgaggtggacttcaacgaggacgtggcctttctcaccgtcgtggccacgctg
attggccagttcatgagcctcaacgagaagtacgaggccaaggtcgaagtcctcaagcgc
gagaacgtttcgctgaagttcaagctctcccaggaatcccgggggctgtacatcgtcggg
cgcagcctggccatgcaggatgtccagcgccagatcgaaaaggtcgccccgacccgggcc
acggtgctgctgcttggcgaatccggcaccggcaagacgctcatcggccgcatcatccac
gacctctccgaacgcaaggactatcccttcatcaaggtaaactgcgcctcgatcccggaa
aacctgctggaatcggaactgttcggctacgaaaagggcgcgttcaccggcgcggaccag
accaagcccggccgtttcgaggaagccaacaaggggaccatctttctcgacgagatcggc
gaactgcccctggggcttcaggccaagctcctgcgtgtgctgcaggacaaggaattcgag
cgccttggcagcaacaagacccggcaggtggacgtgcgcatcctggccgccaccaacaag
gatctggccgctctggccgaggtcggcgcgttccggccggacctctattaccgcttaaac
gtctttcccttgcagaccccgccgcttcgggagcgcaaggaggacatccaaagcctcatc
atccatttcctcaacaaggtttccaaggaatacgcccgcaacctgaccttttccaccgag
gccctggccgtgctcaaggagtacgactggccgggcaacgtgcgcgagatggagaatctg
gtggagcggctggttatcctggcggaaaacgagcgtatcgacgccgacctcatccggccc
tatctcaccatccccagccgcgacgacagttacgaagccgagtacggcagcgaaggcgaa
ggcgcgccgtcgctcaaaagcctggaaaagtccgtcatcatcgacgccctgcgccgccat
ggcggcatccagcacaaagcggccagggaactcggcatcacgccccggcagatgggctat
cgggtgaagaaattcaatctggaatccatggtggccgtgcagcgggtgaaaaaccgctga
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