Solidesulfovibrio carbinolicus: C3Y92_13080
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Entry
C3Y92_13080 CDS
T06503
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
dcb
Solidesulfovibrio carbinolicus
Pathway
dcb00521
Streptomycin biosynthesis
dcb00523
Polyketide sugar unit biosynthesis
dcb00525
Acarbose and validamycin biosynthesis
dcb00541
Biosynthesis of various nucleotide sugars
dcb01055
Biosynthesis of vancomycin group antibiotics
dcb01100
Metabolic pathways
dcb01110
Biosynthesis of secondary metabolites
dcb01250
Biosynthesis of nucleotide sugars
Module
dcb_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
dcb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
C3Y92_13080 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
C3Y92_13080 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
C3Y92_13080 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
C3Y92_13080 (rfbB)
00525 Acarbose and validamycin biosynthesis
C3Y92_13080 (rfbB)
Enzymes [BR:
dcb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
C3Y92_13080 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
NAD_binding_10
adh_short
KR
AvrM_N
Motif
Other DBs
NCBI-ProteinID:
QAZ68107
UniProt:
A0A4P6HLP5
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Position
2978851..2979873
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AA seq
340 aa
AA seq
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MRLLVTGGCGFIGSNFIRDMLTRHEGISIVNLDLLTYAGNRQSLADVEAAFGGSRYHFVR
GDIANSELALYLLEEHKIEAVVNFAAESHVDRSITDATPFVRTNVLGAQSLLDAARHYGV
RRFVHVSTDEVYGTLGPDGKFSEATPLAPNSPYSASKAGADMLMRAAYETFGMDVVVTRC
SNNYGPYQFPEKLIPLMFSKAMADEALPVYGDGLNVRDWIYVIDHCRGVELALMKGRPGE
VYNFGGDAEKPNIEVVRTILAALGKPESLIRYVTDRPGHDRRYAMDFTKAARELGFAPAW
DFTRGIAETMAWYRANGAWLDSVNSGAYRQFMASWYGERA
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgctcgtgaccggaggctgcggcttcatcggctccaacttcatccgcgacatg
ctcacccgccacgaaggaatctccatcgtcaacctcgacctgctcacctacgccggcaac
cggcagagcctggccgacgtcgaggccgctttcggcggctcgcgctaccacttcgtgcgc
ggcgacatcgccaacagcgagctggccctctacctcttggaggagcacaagatcgaagcc
gtggtcaatttcgcggccgaatcccacgtggaccgctccatcaccgacgccacgcccttt
gtgcgcaccaacgtgctcggggcccaaagcctcctcgacgccgccaggcattacggcgtg
cgccgcttcgtccacgtctccaccgacgaggtctacggcacgctcgggccggacgggaag
ttctccgaggcaacgcccttggctcccaacagcccctactcggccagcaaggccggggcc
gacatgctcatgcgggctgcctacgagaccttcggcatggacgtggtggtcacccgctgc
tccaacaactacggcccctaccagttcccggaaaagctcattccgctgatgttctccaag
gccatggccgacgaggccctgccggtctacggcgacgggctcaacgtgcgcgactggatc
tacgtcatcgaccactgccggggcgtggaactggccctcatgaagggccggccgggcgag
gtctacaacttcggcggcgacgcggaaaagcccaatatcgaagtcgtgcgcaccatcctg
gccgccctgggcaaacccgaaagcctcatccgctacgtcaccgaccggcccggccacgac
cgccgctacgccatggacttcaccaaggccgcccgggagctgggctttgctccggcctgg
gacttcacccggggcatcgccgagaccatggcctggtaccgcgccaatggcgcatggctc
gacagcgtcaacagcggcgcttaccgccagttcatggcttcctggtacggagaacgggca
tga
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