Solidesulfovibrio carbinolicus: C3Y92_16885
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Entry
C3Y92_16885 CDS
T06503
Name
(GenBank) DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dcb
Solidesulfovibrio carbinolicus
Pathway
dcb03420
Nucleotide excision repair
dcb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dcb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C3Y92_16885
03430 Mismatch repair
C3Y92_16885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dcb03400
]
C3Y92_16885
Enzymes [BR:
dcb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C3Y92_16885
DNA repair and recombination proteins [BR:
dcb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C3Y92_16885
MMR (mismatch excision repair)
Other MMR factors
C3Y92_16885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
HHH
PcrA_UvrD_tudor
HHH_5
DEAD
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
QAZ68817
UniProt:
A0A4P6HNJ3
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All DBs
Position
3843682..3845898
Genome browser
AA seq
738 aa
AA seq
DB search
MDFARELNPAQLEAVSTTEGPVLVIAGAGSGKTRTVVYRLAHLVLKGVEPASILLLTFTR
KAAQEMLTRAGLLLALSAQGISGVAGGTFHAFAFAALRRYSEAAGFPTGFTCLDAADCED
ILGQCKDRLGLGKGDRSFPRKSAILGLLSKARNKELEVGDVIAREAFHLLPYAEAITSLG
QAYGAFKAEHNLLDYDDLLFTLERLLADPAGPGALIRARHSHVMVDEYQDTNKVQARLTR
LLAPEGGNVMAVGDDAQSIYAFRGASVDNILDFPSLFPGTKLIKLERNYRSTQPILNLTN
AVLAGAGRKFEKHLFTTREDGPQPQCMRPFSDLTQASMVAAKVKELSATFPLHEIAVLFR
AGYQSYALEVELGKAGIPFQKYGGQKFSEAAHIKDVLAYLRLARNTADFPAWSRVLAFVP
GIGPKTATRVFEAIRAGDRAMLGKMAAKSGEFKALIEFLDALRALPPSPQELLAKVIEAY
APLLAEKYPDDYPRRQAGLDQLEQIAAAYADLDAFLADLVLENPDEDRKKAREGHLVLST
VHSSKGLEWSAVLIIDLVDERFPSRHALSRAEDLEEERRLLYVACTRARDYLGLFAPETL
YQRQGGGCAPAMPSIFLRELPQGLLAERRERLGGSGAASFACPAPTAAGGTPAFTRQPVR
RATSAPLSARLPAREDAPAPRPAPDPSTLGYCRHKIFGRGKVIGVLDDGKYRVNFPNFGP
KVILAAFLEMEGAASPEA
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgcccgcgaactgaacccggcccagcttgaggccgtcagcaccaccgaaggg
ccggtcctggtcatcgccggcgccggcagcggcaagacccgcaccgtcgtctaccgtctg
gcccatctggtgctcaagggcgtggagccggcctccatcctgcttttgaccttcacccgc
aaggccgcccaggagatgctcacccgggccggactgctgctggcccttagcgcgcaaggc
atctcgggcgtggccggcggcaccttccatgccttcgcctttgccgcgctgcgccgctac
agcgaggcggccggttttcccacaggattcacctgcctcgacgccgccgactgcgaggac
atcctggggcagtgcaaggaccggctgggcctgggcaagggcgaccggtcgtttccccgc
aaatcggccatcctgggactgctctccaaggcccgcaacaaggaactggaagtcggcgac
gtcatcgcccgggaagccttccacctgctgccctatgccgaggccataacgagccttggc
caagcctacggcgcgttcaaggccgagcacaatctcctcgactacgacgatctgctcttc
accctggagcggctcctggccgaccccgccggtcccggcgcgctcattcgcgcccgccac
agccatgtcatggtcgacgaataccaggacaccaacaaggtccaggccaggctcacgcgc
cttcttgccccggaaggcggcaacgtcatggccgttggcgacgacgcccagtccatctac
gcctttcgcggcgcgtcggtggacaacatcctggatttcccgagcctgttcccgggcacc
aagctcatcaagctcgaacgcaactaccgctccacccagcctatcctcaacctcaccaac
gccgtgctggccggagccggacgcaagttcgagaaacatctcttcaccacccgcgaggac
ggcccccagccccagtgcatgcggcccttttccgacctcacccaggcgtccatggtggcg
gccaaggtcaaggaactctcggccaccttcccgctgcatgaaatcgccgtgctgtttcgg
gccggctaccagtcctatgccctggaagtggagctcggcaaagccggcatccccttccag
aagtacggcggccagaaattctccgaggccgcccacatcaaggacgtgctggcctacctg
cgcctagcccgcaacacggccgattttccggcctggtcccgggtgctggccttcgtgccg
ggcatcggccccaaaacggccaccagggtcttcgaggccatccgggccggcgaccgggcg
atgcttggcaagatggcggccaagtcgggcgaattcaaggcgctgatcgaattcctcgac
gccctgcgcgccctgccgccctcgccccaggagctgctcgccaaggtcatcgaggcctat
gccccgcttttggccgaaaaataccccgacgactatccgcgccgccaggccggcctggac
cagctcgaacagatcgccgccgcctacgccgacctcgacgccttcctggccgatctggtc
ctggaaaacccggacgaggaccgcaaaaaggctcgcgaaggccatctggtgctgtccacg
gtccattcctccaagggcctggagtggtcggccgtgctcatcatcgatctggtggacgaa
cgcttcccctcgcgccatgccctgtcccgggccgaggatctggaagaggaacgccggctg
ctctacgtggcctgtacccgcgcccgggactatctcgggcttttcgccccggaaacgctc
taccagcgccagggcggcggctgcgccccggccatgccgagcattttcttgcgcgaactg
ccccagggccttttggccgagcgccgcgaacgcctgggcggctccggcgcggccagcttc
gcctgtcccgcgcccacggccgccggggggactccggcctttacccgccagcccgtgcgc
cgggccacctcggccccgctctcggcccggctgccggcccgggaggacgccccggccccg
cgcccggccccggacccgtcgaccctgggctactgccgccacaagatcttcgggcgcggc
aaggtcatcggcgtcctggacgacggcaaataccgggtcaattttcccaatttcggcccc
aaggtgatcctggccgcttttctggaaatggagggagccgcctcgcccgaggcctga
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