Dermochelys coriacea (leatherback sea turtle): 119840961
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Entry
119840961 CDS
T09064
Symbol
RFWD3
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3 isoform X1
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcc04121
]
119840961 (RFWD3)
Enzymes [BR:
dcc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119840961 (RFWD3)
Ubiquitin system [BR:
dcc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119840961 (RFWD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
Beta-prop_WDR5
zf-C3HC4
zf-C3HC4_2
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
zf-RING_UBOX
WDR55
EIF3I
Beta-prop_EML_2
zf-rbx1
Rtf2
Beta-prop_RIG_2nd
zf-RING_11
zf-C3HC4_4
WD40_2
WD40_Prp19
Beta-prop_WDR36-Utp21_1st
WD40_WDHD1_1st
Myo5a
zf-RING_Vps41
CALCOCO1
zf-ANAPC11
DUF7837
DUF3060
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_2nd
Motif
Other DBs
NCBI-GeneID:
119840961
NCBI-ProteinID:
XP_038223664
LinkDB
All DBs
Position
12:1572936..1633612
Genome browser
AA seq
737 aa
AA seq
DB search
MAQEEMEVDLQPAVTYSVEHHEAFPSEVSGHALLSLPSNSPVPSDEAESIVVPPADEVIV
VSGADEVVTVAESDPQLHAAPSLDGLQRLHGVLELFQLQAAQQITRQPPTRRTRRRRRGG
GSQRTISNRPTAPLDSYFMVSRTQGSTAAASPSLETLHLPVGNSGHSSDETLELSNSDSS
SSTEEEDVAAPQEAVPIAASLGVSDQVPPEHEGRDAEEAEVQHKQRTPLKKPDVTVPTVP
LDEEEGDTCAICFEQWTNAGEHRLSALRCGHLFGYTCIIRWLKGQAGKCPQCNKKAKRSD
VVVLYARTLKALDTSEQERMKSSLEKEQLLRRQAELESAQSRLQLQVLTDECSKLRKQVQ
ELKALMAQHNTSTSQQPGSSGSCFPGCPSSSQSQHKYHFEKAFLVSQLGSCRVMAYCDSL
SCLVVSQPSPQATLIPGCGFKMISAANLKSSQYIPIHSKQIRGLAFSNRTDGLLLSAALD
HTLKLTSLTTNTVVQTYNAGRPVWSCCWCLDDTNYIYAGLVNGSILVYDLRDTSSHVQEL
APQKSRCPMVSLSYLPRMASTTLPYGGVIAGTLEGGCFWEQKATNSYRPHHLPLEPGGCI
DIQTEISTRHCLATYRPNKSNNCLHCVVMELSCSQLTDASVDMVCSCHPVQTFSAGPTCK
LLTKNAIFQSPEEDGSILVCAGDEASNSAMVWDAGRGSLLQKLQTDLPVLDICPFTVNCN
NFLATLTEKVVKLYKWD
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggcacaggaagaaatggaagtggatctccagccagcagttacttattctgtggagcac
cacgaggcatttccctcagaggtctccggtcatgctctactttcactgccttccaactct
ccagtgcccagtgatgaggcagaaagcattgtggttcctcctgctgatgaagtgattgtg
gtctctggtgctgatgaagtagtgacagttgctgagtctgacccccagttgcacgctgct
cctagcctggatgggctgcagaggctgcatggggtattggaactgtttcaattacaggct
gcacaacagatcacacgacagccaccaacaaggagaactcgccggcgacgaagaggtggt
ggatcccagaggacaatcagtaataggcccacggcaccactggatagttatttcatggtc
agcaggacccaaggatcaaccgcagcagcatctccatcacttgagactttgcatcttcca
gttggcaacagtggtcacagctcagatgagaccttggagctgagcaactctgacagcagc
agctccactgaggaggaggatgtggcagcaccccaggaggcggtacccatagctgccagt
ttgggagtttctgatcaggtcccaccagagcatgaaggtcgtgatgctgaagaagcagaa
gtccagcacaaacagagaactccactaaagaaacctgatgtaacagttcccactgtacca
ttggatgaggaagaaggggacacctgtgccatctgctttgagcaatggactaatgctggg
gagcaccggctctcagcattgcggtgtggacacctgtttggatacacttgtatcataagg
tggcttaagggacaggcagggaaatgccctcagtgcaataagaaggctaagcgctcggac
gttgtggtcctatatgcccgtactttgaaagcactggacaccagtgaacaggagcgcatg
aaaagctctttagaaaaggagcagttgttgcggagacaggcggaattggaatccgcacag
agtcgtctccagttgcaggtcttgacagatgaatgcagtaaacttcgcaagcaggtccag
gagctgaaagcactgatggcccagcacaacactagcacctctcagcaacctggcagctcc
ggttcctgtttcccaggctgtccctcctccagtcagagccagcacaaataccactttgag
aaggccttcctggtttctcagttagggagctgccgggttatggcttattgtgactcactg
agctgtcttgtggtgtcacagccctctccgcaggctacacttattcctggttgtggcttt
aagatgataagtgctgccaacctgaagagcagtcagtatattcccatccacagtaagcag
atccggggactggctttcagtaatcggacagatggcttgctgctgtccgctgctttggac
catacgctcaaacttaccagtttgacaacaaatactgtggtccagacatacaatgctggc
cgccctgtctggagctgctgctggtgccttgacgataccaactatatttatgctgggctt
gtcaatggctctatcctggtgtatgatctaagggacacaagctctcatgtccaggaacta
gcccctcagaagtccaggtgtcctatggtgtccctgtcctacctgccccgaatggcctcc
accacactgccatatggtggggtaatagctgggaccttagaaggaggctgcttttgggaa
cagaaggccaccaactcctaccggcctcaccatctgcctctagagcctggaggctgcatc
gatattcagactgaaatcagcactcggcactgccttgcaacttacaggcctaataagagc
aacaattgcctgcattgtgtggtgatggaactgtcctgtagccaactgacggatgcatct
gtcgacatggtctgctcctgtcacccagttcagacattcagtgctgggcccacctgcaaa
ctgctgaccaaaaatgccatctttcagagtccagaagaggatggcagcatcttggtgtgc
gctggcgatgaggcctcaaactctgccatggtatgggatgctggaaggggctccttactt
cagaagctacaaactgacctacctgtgctggacatctgccctttcacggtgaactgcaat
aatttcctggccactctcactgagaaggttgtgaagctctacaagtgggattga
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