Dermochelys coriacea (leatherback sea turtle): 119841232
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Entry
119841232 CDS
T09064
Symbol
KATNB1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 isoform X8
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dcc04812
]
119841232 (KATNB1)
Cytoskeleton proteins [BR:
dcc04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
119841232 (KATNB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
Katanin_con80
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_EML_2
EIF3I
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_WDR41
Beta-prop_SPT8
Beta-prop_IFT122_1st
WD40_RFWD3
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_VPS8
Beta-prop_HPS5
Beta-prop_RIG_1st
eIF2A
RMC1_N
WDR54
PROPPIN
Beta-prop_WDR19_1st
VPS8_N
Beta-prop_LRRK2
Beta-prop_IP5PC_F
Beta-prop_pof12
Beta-prop_ACSF4
Beta-prop_WDR35_TULP_N
WD_LRWD1
Tricorn_2nd
Motif
Other DBs
NCBI-GeneID:
119841232
NCBI-ProteinID:
XP_038224408
LinkDB
All DBs
Position
12:3836398..3863161
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AA seq
657 aa
AA seq
DB search
MATSVATKTAWKLQEITAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWSVNKPNCIISLT
GHTTPVESVRINTNEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPFGSFV
ASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASAADDHTVKLWDLAAGK
IMFEFTGHTGPVNVVEFHPNEYLLASGSADRTVRFWDLEKFQVVSCIEEEAIPVRCVLFN
PDGCCLYSGYQDSLRVYGWEPERCFDVVLVTWGKVADLSICNNQLIGVSVSQSTVSSFVV
DLSRVTKSGSGLHGPIKDDRPLAQPTPTGSSLRRIYDRPSTTCSKPQRVKHNSESERRSP
SSEEDRDEKESKAEIQNPEDYKEIFQPKNSIIRTPPRKSEPFPAPPEDEPVIIKEAAKPS
QVMDIQTPLPNQENPDLVQRQPIASSTPVTRAEPSVIPAARNAPIGLKASDFLPAVKNQS
QCEIVDEEAMSQIRKGHETMCVVLTSRHKNLDTVRAMWSAGDIKTSVDSAVAINDLSVIV
DLLNIVNQKASLWKLDLCTIILPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDILA
APPSVGVDITREERLHKCKLCYKQLKNISNIIKNKSGLSGRHGSAFRELHLLMAVFE
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttctgttgccaccaagacagcttggaagctgcaagagatcacagctcacagc
agcaatgtgtcctcgctggttctgggcaaaagttcaggtcggctgctggcaactggcgga
gaggactgtcgggtcaatatatggtctgttaacaagcccaactgcatcataagtttgaca
ggccatacaacaccagtggagagcgtgaggatcaatacaaatgaagagctcatagttgca
ggatcccaatcaggatccattcgagtttgggatctggaagctgccaaaattcttcgtaca
ttaatgggccacaaggcaaatatctgcagccttgatttccatccctttggaagctttgtg
gcttcggggtccctggacactaacatcaagctctgggatgtaagaagaaaaggctgtgtc
ttccggtacaagggtcacacacaagcagttaggtgtctccgatttagtcctgatgggaag
tggttagcctccgctgcagatgatcacactgtaaagctgtgggatctggcggctgggaag
ataatgttcgagtttacaggacatacaggcccagtaaacgttgttgaatttcatcccaat
gaatacctcttggcctccggcagcgctgacaggacagtcagattctgggacttggagaag
tttcaagtggtgagctgcattgaagaagaggccattcctgtcaggtgtgttcttttcaac
ccagatggctgctgcttgtatagtggctaccaggattcactgcgtgtgtatggctgggag
cctgagcgctgctttgatgtggtcttggtgacctggggaaaagtggctgacttatctatc
tgcaacaaccagctgataggggtttccgtctcgcagagtacagtctcctcattcgttgtg
gacctcagcagagtcacaaagtctggttccggtcttcatggaccgatcaaagatgatagg
cctctggctcagcccacccccacagggtcctcccttcgacgcatctatgacaggccatca
actacctgtagcaagccccaaagagtgaagcacaactcggagagcgagaggcgcagtccc
agcagtgaagaggaccgggatgaaaaggaatcaaaggctgagatccagaatccagaggat
tacaaggagatcttccagcccaagaattccatcattcgaactccaccacgaaagagtgag
cccttcccagcccctcccgaggatgagcctgtcatcataaaggaagcagcaaagcctagc
caagtcatggacattcagaccccactgccaaaccaagaaaaccctgacctggttcagagg
caaccaatagcctcctcaacccctgtgaccagagcagagccgtcagtgattcctgcagcc
aggaatgcgcccattgggctgaaggcctctgactttctgccagctgtgaaaaaccaaagc
caatgcgagatagtggacgaggaagccatgtcccagatccgtaagggccatgagactatg
tgtgtggtgctcaccagccgccacaagaacctggacactgtgcgagcgatgtggagcgct
ggtgacataaagacatctgtggactctgctgtggctatcaatgatctctctgtcatagtg
gacctactgaacattgtcaaccagaaggcgtctctctggaaactggatctgtgtactata
atcctgcctcagatagagaagctccttcaaagcaaatatgaaagttacgtacagactggc
tgcacctccttaaagctgattctccagagattcctgccactgatcaccgacattcttgct
gcaccaccgtctgttggggtagacatcacaagagaagagaggctccataagtgcaaactg
tgttacaagcagttgaagaatatcagcaatatcataaagaacaagtctggactgagtggc
cgccatggcagtgccttccgtgagcttcacctcctcatggctgtcttcgagtga
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