Dermochelys coriacea (leatherback sea turtle): 119841316
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Entry
119841316 CDS
T09064
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119841316 (SF3B3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dcc03021
]
119841316 (SF3B3)
03041 Spliceosome [BR:
dcc03041
]
119841316 (SF3B3)
03036 Chromosome and associated proteins [BR:
dcc03036
]
119841316 (SF3B3)
Transcription machinery [BR:
dcc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
119841316 (SF3B3)
Spliceosome [BR:
dcc03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
119841316 (SF3B3)
Complex B
119841316 (SF3B3)
Complex C
U2 SnRNP specific factors
119841316 (SF3B3)
Chromosome and associated proteins [BR:
dcc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
119841316 (SF3B3)
TFTC complex
119841316 (SF3B3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
Motif
Other DBs
NCBI-GeneID:
119841316
NCBI-ProteinID:
XP_043351178
LinkDB
All DBs
Position
12:complement(6551587..6605933)
Genome browser
AA seq
1213 aa
AA seq
DB search
MFLYNLTLQRATGISYAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
IIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPGAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGAEKQDELGERSSI
GFLYLNIGLQFFCRISSQLELFLDHQKRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYS
YQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYT
PRRFVIHPESSNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAAAFLN
ENLPESIFGAPKAGNGQWASVVRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFANASDDWH
VLVGVAKDLILNPRSVAGGFIYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVG
KLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQLIIF
ADDTYPRWVTTATLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNG
ASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHV
EMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEV
SKKLEDIRTRYAF
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgttcctttacaatttaacgttgcagcgagccactggcatcagctatgccatccatggc
aatttctcaggaaccaaacaacaggaaattgttgtttcccgggggaagatcttggagttg
ctccgtcctgatcccaacactgggaaagtacacaccttgctgacggtggaagtgtttgga
attattcgctcccttatggccttcagactgacaggtggaaccaaagactatatcgtggtg
ggtagtgattcaggtcgcattgttatcctggagtaccagccctccaagaacatgtttgag
aagattcaccaagaaacctttggcaagagtggctgtcgcagaatcgttcctggccagttc
ttggctgtggacccaaagggccgtgctgtcatgatcagtgccattgagaaacagaagctg
gtatacatcctgaacagagatgctgctgcccggctcaccatttcttccccactggaagcc
cacaaggccaacaccttggtctaccatgtggtgggagtagatgtggggtttgaaaaccca
atgtttgcttgtctggaaatggattatgaggaagctgacaatgatccaacaggagaagca
gcagctaacacccagcagaccctgacattttatgagttagacctgggtttgaaccacgta
gttaggaaatacagtgaacctttggaggagcatggcaacttccttataacagttcctggt
ggctccgatggtcccagcggggtgctgatctgttctgaaaactacattacatataaaaac
ttcggtgaccagcctgatatcagatgtcccattcccaggagaaggaatgacttggatgac
ccagaaaggggtatgatttttgtctgctctgctacacacaagaccaaatccatgttcttc
ttcctggcccagacggagcagggagatatcttcaaaatcaccctagagactgatgaagac
atggtgacagagatccgactgaagtattttgatactgttcctggggctgctgccatgtgt
gtgctgaaaacagggttcctctttgtggcatctgagtttggaaaccattacctgtaccag
atagcccatctgggagatgacgacgaggagccggagttctcctccgccatgcccctggag
gaaggagacactttctttttccagccacgaccactcaagaacctggtgttggtggatgag
ctggacagtctgtctcctatcttgttttgtcagatagcagatctggccaatgaagataca
ccccagttatatgtggcctgtggacgggggccgcggtcgtctctgagggtcctaaggcat
ggacttgaggtgtctgaaatggccgtctcagagctgcctggtaaccccaatgctgtttgg
actgtgaggagacacattgaagatgaatttgatgcctatattatcgtgtccttcgtaaat
gccacgctggtgctgtctatcggagagactgtagaggaagtgactgattctggattcctg
ggtaccacccccactttgtcctgttccttgttgggggatgatgctttggtacaggtttat
ccagatggcatccggcacatccgagcagataaaagggtgaatgaatggaagacaccagga
aagaaaaccatcgtaaagtgtgctgtgaaccagagacaagtggtgatagcactgactgga
ggagaattagtctactttgagatggacccatcaggacagttgaatgagtacacagagagg
aaggagatgtcagctgatgtggtgtgcatgagcttggccaacgttcctcctggggagcag
cgttcccgcttccttgccgtcgggttggtggacaacactgtcagaattatttcccttgac
ccttcggattgtttacaacccttgagtatgcaggctctccctgcacagccagaatcactg
tgtattgtggagatgggcggggcagaaaaacaggatgagttgggcgaacggagctccatt
ggcttcctgtacttgaacatcggattacagtttttctgtcggatctcaagtcaactggag
ctctttcttgatcaccagaagaggtaccttggctcacgccccgtgaaactcttcagagtc
cgaatgcaaggccaagaggcggtgctggccatgtccagtcgttcatggctgagttattct
tatcagtcccgctttcatctaacccccctgtcctatgaaactctagagtttgcatctggc
ttcgcttctgagcagtgtcctgagggcattgttgctatctccacaaacacattgcggatt
ttggcgttggaaaagctgggggcagtcttcaaccaggttgccttcccactgcagtacacc
cccaggaggttcgtcattcaccctgagagcagcaacctgatcatcatcgagacagaccac
aatgcttacaccgaggccacgaaggcccagaggaagcagcagatggctgaggaaatggtg
gaggctgcaggtgaggatgagagggaactggccgcagagatggcagccgcctttctgaat
gagaaccttcctgagtccatctttggtgcccccaaggcaggcaatggccagtgggcctct
gttgtccgcgtgatgaaccccatccagggcaatactttagatctggtccaactagagcag
aacgaagctgccttcagtgtggcagtatgccgattcgccaacgccagtgacgattggcat
gtgctggtgggagtggccaaggacctgattctgaacccccggtcggtggctggtgggttt
atctacacatacaagctggtgaataatggcgagaagctggagttcctacacaagacccct
gtggaggaagtacctgcagccattgccccattccaaggccgagtcttaattggagttgga
aaactcttacgtgtatatgacctgggcaagaagaagctgcttcggaaatgtgagaacaag
cacattgccaactacatctccggtatccaaaccatcgggcacagagtgatcgtgtcagat
gtccaggagagcttcatttgggtgcgctacaagaggaatgagaaccagctgatcatcttt
gccgatgacacctacccccggtgggttaccactgccaccctccttgactatgacactgtg
gctggagcagacaagtttggtaacatctgtgtggtgaggctgcctcccaacacaaacgat
gaggtagatgaggatccgacaggcaacaaggctttgtgggacagagggcttctcaatgga
gcgtcgcagaaggctgaggtgattatgaattaccacgtgggagagacagtgctgtcgtta
caaaagaccacactgattcctggagggtctgagtctctcgtgtacaccaccttgtcgggg
ggcattggtatcctggtccccttcacgtcccatgaggatcatgacttcttccagcacgtg
gaaatgcatctgaggtcagagcatccccctctctgtggacgggaccacttgagcttccgc
tcctattacttcccagttaagaacgtgattgacggggacctttgtgaacaattcaactcc
atggaacccaacaaacagaagaacgtctcggaagagctggacaggaccccccccgaggtg
tccaagaagctggaggatatccgcacgcgctatgccttctga
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integrated database retrieval system
