Dermochelys coriacea (leatherback sea turtle): 119841323
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Entry
119841323 CDS
T09064
Symbol
CHD9
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 9
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dcc03036
]
119841323 (CHD9)
Chromosome and associated proteins [BR:
dcc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
119841323 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
119841323
NCBI-ProteinID:
XP_043351180
LinkDB
All DBs
Position
12:complement(13942899..14136762)
Genome browser
AA seq
2900 aa
AA seq
DB search
MTDPMMDFFDDANLFSETLEDLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQDTQ
AQQKMSEFEQLNQYDSLKLQVNQSFSSPADSVLSPHTQFNCSPIHPQNQSNGMFPDVADG
SPMWGHQTTTTVPNQNGSPFHQGHSQSMQQNKSFVAHHDFALFQANEQQHQCASLQSQQS
RNNINTGQDGLNQPKNFMEANVSAPRRVSVTHPPQIANPSTSQQPLSVQQFSQNASASIH
FCGNQEGNFDGQSPTMTPCSVNNTQRFPSPYSYSNNHISPTSLLQSSTALSTSQQTHPLS
DYTGSDAFTSQTGTKQETTEHLLNPNTPLNSNSFQMLHSAHPQGSFSSSKLSPVNINFPA
SAGSASQISHFSDPIESNGFSSLDENLLHQVESQAEPFTGLDPEDLLQEDLLPQFDDSAF
VQDTSSHILEHDLEHHITPQQITQSSDIARTQSQSQMHPWHSSVSNQHLQDRNRIALQGQ
PPSSKKTDVSGTYTKLQNTQVRAMSEKKQKKKVESESKQEKANRIISEAIAKAKERGERN
IPRVMSPENFPTVSAEEREEKKGRKIKSKPKDKESKKTKTGSSSKIKDKTKIGKLIITLG
KKQKRKNESSDEMSDTKQTPQRSFKDEDSQKRRSNRQVKRKKYAEEGEGKQSEEEAKVSV
KIKKSSAPLPAEQPLQLFVENPSEEDAAIVDKILSSRIVKKEISAGMTMEEEEFFVKYKN
YSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVEVDRVLEVS
FCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDQAKIEEFEQLQASRPDSRRLDRPPP
NSWKKLEQSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEI
LLTGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYHGSMVSRQMIQQYEMYFRDTQGRI
IRGTYRFQAIITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLVTPS
ALTGTPLXNTVEELFSLLHFLEPLRFPLESTXMQELGTLKRRSMVQKLQAILKPMMLRRL
KEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRK
CCNHPYLIKGAEEKILGEFRETYIPTAPDFHLQAMIQSAGKLVLIDKLLPKMKTGGHKVL
IFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGG
LGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASL
KLGLDKAVLQSMSGRENSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQI
LQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAISGRNS
LVIDTPRIRKQTRPFSATKDELAELSEAESEGDDKPKLRRPWTACSFVPXFVSTLXWIWR
TECFRVEKNLLVYGWGRWREILSHGRFKRQLNEQDVEIICRALLAYCLVHYRGDEKIKSF
IWDLITPTEDGQTRELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQ
DEGYKKHIKHHCNKXGLARVRMLYYLKQEVIVNEFQKVFDGDLEVDVWVPEPEHSEVPAE
WWDADADKSLLIGVFKHGYEKYNTIRADPALCFLERVGXPDEKAVAAXQRANDYIDGDVE
DPEYKPAPAMFKDDMEDDASSPGDLVIADGDGQMMEGDKIYWPTQSALTTRLRRLITAYQ
RTSKNRQAQQIQPTFPVQATVMQPPYEEAALNPKIAAKIERQQRWTRREEADFYRVVSTF
GVVFDPDGGRFDWTKFRAMARLHKKTDESLEKYLYAFMSMCRRVCRLPSKEELVDPTIFI
QPITEERASRTLYRIELLRKVREQALRHPQLFERLKLCQPNPDLPVWWECGTHDRDLLIG
AAKHGVSRTDYHILRDPELSFMSAQRNYSQNKVALSRTSTPLLHQYQMALSASPLAPQSR
LPDTKGSALEDTKVKNENLKEDPQSSEEESMSTEETRTMMKSEPLSPKNGTPLQTTDHKP
GVKTETDRRMVAARTEPLTPNPASKKQRVNKRGSDSSSDSDSDSDRSSCSSRSSSSSSSS
SSSCSRSQSGSSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSDDEEAQKRAEGTPH
IKAYDEESVASLSTTQDETQDCFQLNNGTPNSNYLLQGGYMLAASYWPKDRVMINRLDSI
CQTVLKGKWPSVRRSYDSNTVASFYTTKLLDSPGAAADYSEPSAPTPPTAGVKEEHDQSP
QMPKVKKHVREKEFTVKINDEGGLKLTFQKQGFSQKRLFESEEGTLGQQQYLARLRELQN
ASETSLVNFPKSLPESGASSQLTVNANGVIVDSQPVVKKRRGRRKNVEGVDILFINRNKP
SNHVSPGINTSQVAPVINPTLTYAQSQGLLDAESPVPVINLKDGTRLAGDDAPKRKDLEK
WLKEHPGYVEDLGAFIPRMQLHDGRPKQKRHRCRNPNKLDVNSLTGEERVQLINRRNARK
VGGAFAPPLKDLCRFLKENPEYGVAPEWGDVVKQSGFLPEGMFDRILTGPVVREEVSRRG
RRPKSEIAKATAAAAAATAANVSVNPLLANGLLPGVDLSTLQALQQNLQNLQSLQVTAGL
MGMPAGLTTGGEAKNMAAMFPMLLSGMAGLPNLLGMGGLLTKSTESVSEEKKGNDSKEPV
VKKERTENQHADNGGEDSVSSSPSTSSAAANPLALNPLLLSNILYPGMLLTPGLNLHIPA
LSQSNIFDVQNAENNDTGSAKPTEEKEENSRVRDQEDKGGTEPSSHNENSTDEGSEKADA
SSGSDSTSSSSEDSDSSDED
NT seq
8703 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcctatgatggatttttttgatgatgccaacctttttagtgagacgttggaa
gatttgtcggatgatgcctttgtacaacctggacctgtttcacttgttgatgaattgaac
ttaggtgcagaatttgagcctttgcacatagactcattgaaccatgtgcaagatactcag
gctcaacaaaagatgagtgaatttgagcagttaaatcagtatgattcattgaaacttcaa
gtaaatcagtctttcagcagtccagctgacagtgttttatcaccacacactcaatttaat
tgctcacctatccatccacaaaaccagtccaatggaatgtttcctgatgtggctgatggt
agtcctatgtggggtcatcaaactaccacaactgttccaaatcaaaatggatcccctttt
caccaaggacattctcagtctatgcagcaaaataaaagttttgtagcacaccatgacttt
gccttatttcaggccaacgaacagcagcatcagtgtgcctcactacagtcgcaacaaagc
agaaacaacattaatacagggcaagatggtctgaatcagccaaaaaactttatggaggct
aatgtatctgctccacgcagagtcagcgttactcatccacctcaaattgctaatccatca
acttcacagcagcctctctctgttcaacagttttctcaaaatgccagtgcttcaatacat
ttttgtgggaatcaagaaggaaacttcgatggacaatctccaactatgactccttgctct
gttaataatacacagaggtttccttctccatattcttactctaataaccacatttctcct
accagccttctacagtcttctactgctctttctactagccaacaaactcatcctttatct
gattatactggaagtgatgcatttacatctcaaacagggaccaagcaagaaaccaccgag
cacctcttgaatcctaatacacctttgaattcaaatagtttccagatgttgcattcagca
catcctcagggcagcttcagtagttcaaaactctctcctgtgaacattaattttccagcc
tctgcgggttctgcttctcagataagccatttcagtgatcctatagaaagcaatggtttt
tcatctttggatgagaacttacttcatcaagttgagtctcaagctgaaccatttacagga
cttgatccagaggacctccttcaggaagacctcctaccccaatttgatgattcagcattt
gttcaggacacttcaagccacatattagagcatgacctagaacaccatattaccccacag
caaataacacagtcatctgatattgctcggacacagtctcaaagtcagatgcatccctgg
cattcttcagtttctaatcagcatctacaagatagaaatcgtatagccttgcaagggcag
cctccttcctccaagaagactgatgtttcagggacatatactaaattgcagaatacccag
gtgagggcaatgtcggaaaagaaacagaagaaaaaagtagaatcggaaagtaagcaggag
aaggctaatcgcataatatcggaggcaatcgcaaaagcaaaagagagaggggaaagaaac
attccacgagtaatgagccccgaaaacttccccactgtttcggctgaagaaagagaggaa
aagaaaggtagaaaaattaaatccaaaccaaaggacaaggagagcaaaaaaactaaaact
ggttcctcatccaaaattaaagacaaaacaaaaattggcaagcttataatcacattgggt
aaaaagcagaagagaaagaatgagtcttcagatgaaatgtctgatactaagcagactcca
cagcggtcatttaaagatgaggactctcagaagagaagatcaaatcgtcaagttaaaaga
aaaaagtatgctgaagaaggagaaggaaaacagtcagaggaagaggctaaagtttctgtg
aaaatcaaaaagagttctgctcctttgcctgctgagcaacccttacaattatttgtggag
aatccaagtgaagaagatgcagcaattgtagataaaattttatcctccaggatagtgaag
aaagaaatatctgctggaatgacaatggaagaagaggaattttttgtaaaatacaagaat
tactcttatcttcactgtgaatgggccacagaacagcagcttttgaaggataaaagaata
cagcagaaaattaaacggttcaagctgaggcaagcacaaagagcccacttttttgcagat
atggaagaagaaccttttaatcctgactatgttgaagtggaccgggtgctagaagtctcc
ttttgtgaagataaggacactggtgagcctgttatttactacctagtaaaatggtgttca
ttgccatatgaagacagcacctgggagttaaaagaagatgtagaccaggcaaaaatagaa
gaatttgaacaactgcaagcttccaggcctgattcaaggagactggaccgacctcctcct
aactcctggaagaagctagaacagtccagagaatataaaaatggcaaccagctcagggaa
taccaactggaaggactcaactggctccttttcaactggtacaatagacgaaactgcatt
ttagcggatgaaatgggtcttggcaaaaccatccagtcaattacattcctctatgaaatc
ctcctgactggtatacgagggcctttcctgatcatagctccactttccactataaccaac
tgggaaagagaatttcgcacatggactgatcttaatgtcgtggtatatcatgggagcatg
gttagcaggcagatgatacagcagtatgagatgtacttcagagacacacaggggcgtatc
attcgaggtacttaccggttccaagctattatcaccacttttgaaatgattcttggtggc
tgtccagaactcaatgcaattgaatggcggtgtgttattattgatgaagcgcacaggctg
aagaataaaaattgcaaactcctggagggactcaaactcatgaatcttgtaacaccaagt
gcgttgacaggcacgccactgncgaacacagtagaagaactgtttagcctccttcatttt
cttgaacctttgcgttttccgctggaatctacantcatgcaggaattggggaccttaaaa
cggaggagcatggtgcaaaagttacaagctatcctgaaaccaatgatgctgagacggttg
aaggaagatgtagagaaaaagttagctcccaaggaagaaactataattgaagtagaacta
actaatatccagaagaaatattatcgggcaattttggagaagaactttgcattcttatcg
aaaggagcaggccaagctaatgtacccaatctagttaacactatgatggaactcagaaag
tgctgcaaccacccttatcttatcaaaggtgctgaagagaaaatccttggggagtttagg
gaaacatatatcccaactgctcctgactttcatctacaagcaatgatccagtctgctggt
aaattggtcctcattgataaacttcttccaaaaatgaaaacaggaggccataaggtgctt
atcttctctcaaatggtgcgctgtcttgacatccttgaggactaccttatacataaaagg
tacttatatgaaagaattgatgggagagtgagaggaaatctgaggcaagctgctattgat
cggtttagcaaaccagattctgatcggtttgtgtttcttctgtgtaccagagctggtgga
ttaggcattaatttgactgcagctgatacatgtataatttttgattctgactggaatcct
cagaatgatctccaggcccaagcccgttgtcacaggattggtcagaacaaagcagtaaag
gtctacagattgataactcggaactcatatgagagagagatgtttgacagagcaagtctg
aaactgggtctggataaagctgtcttacagagcatgagtggaagagaaaatagtgttggt
ggtatccaacagctttccaaaaaagaaatagaagacctgcttcgaaggggtgcctatggt
gctattatggatgaagaggatgagggctctaaattctgtgaagaagacatagaccaaatc
ttgcaacgccgtacgaaaactatcacaattgaatccgaaggaaggggttcaacatttgcc
aaggctagttttgttgcatctggaaataggactgatatttcattagatgatcccaacttc
tggcagaaatgggccaaaaaagcagaaatagatatagatgccatcagtggtagaaacagc
ctggttattgataccccaagaattaggaagcaaacaagaccctttagtgccacaaaagat
gagctggctgagttatcagaagcagagagtgaaggggatgataaaccaaaactccgcagg
ccttggactgcttgttccttcgtcccgtagtttgtttccacgctctagtggatatggaga
acagagtgctttcgggtggagaaaaacttattagtctatgggtggggtcgttggagagag
attttgtcacacggtcgcttcaagaggcaactgaatgaacaggacgtggagataatttgc
cgtgcactcttagcatattgccttgttcactacagaggagatgaaaagataaaaagtttt
atatgggatctcatcaccccaacagaggatgggcaaacacgagagctgcagaatcaccta
ggtttgtcagcacctgtaccgcggggtagaaaaggaaagaaagtgaagactcaggctagc
acttttgatatacataaagcagaatggcttcgaaaatataatccggaacatctactgcaa
gatgaaggatataaaaaacacataaagcatcattgcaataagtaaggtcttgctcgagta
agaatgctgtattacttaaaacaagaagtcattgttaatgaattccaaaaagtgtttgat
ggagaccttgaagttgatgtttgggtccctgagccagagcattctgaggtccctgcagag
tggtgggatgcagatgcagataaatccctcctaattggagtttttaagcatgggtatgaa
aagtacaacactattagagcagatcccgcactctgtttcttggaaagagtgggcnaacca
gatgagaaagcagttgctgctngacagagagcaaatgattacattgatggggatgtagaa
gatccagaatataaaccagccccagcaatgtttaaagatgatatggaggatgatgcttca
tcaccaggagatctagtaatagctgacggagacggtcagatgatggaaggagacaaaatt
tattggcccactcagtctgctttaacaacacgtctgcgccgcctaataacagcctaccaa
cgtactagtaagaacaggcaggcccagcaaatccaaccgacgtttccagttcaggccact
gtgatgcagcctccatatgaagaagctgctctaaatccaaaaattgctgccaagattgaa
aggcaacaaagatggacgagaagagaagaagctgatttttacagggttgtatccacattt
ggagtggtgtttgatcctgacgggggtcgatttgactggacaaaatttagagctatggct
aggctacataagaaaactgatgagagtttagagaagtacttgtatgcttttatgtctatg
tgcaggagagtgtgtcgccttccctcaaaagaagaacttgtagacccaaccatttttatc
caaccaattactgaggagcgtgcttctcggaccttatatcgcattgaactcttgaggaag
gtacgagaacaggctctccgacatccacagctatttgaacgcttgaaactttgtcagcca
aatccagacttgccagtttggtgggagtgtgggactcatgacagggatttacttattgga
gctgctaaacatggagttagcagaacagactatcacattcttcgtgatcctgaactctca
tttatgtctgcccagaggaactacagtcagaataaagtggcactatcaagaacttctact
ccacttttacatcagtatcagatggcattgtctgcttctcctcttgcacctcagtcaaga
ttgccagatactaaagggagtgctcttgaggatacaaaagttaaaaatgaaaaccttaaa
gaggaccctcaatcgtctgaagaagaatctatgtctactgaggaaacacggacaatgatg
aaatctgaacctttgagcccaaagaatggcacgccgttacagactacagaccacaaacct
ggcgtgaaaactgaaactgacaggcgtatggttgcagcaaggacagagcccctaactcca
aaccctgcttccaaaaaacagagagtcaacaaaagagggtcagactctagctctgattct
gactctgattcagacagatcatcctgttcttccagatcatcttcatcatcttcttcctct
tcctcttcctgttcacgctcccagtcaggatccagctcttcttcatcctcatcttgttct
tcagcatcttcctcctcttcatcatcgtcatcttcatcatcgtcatcatcgtcgtcgtcg
tctgaagagagtgacagtgatgacgaagaggcacaaaagcgagcagaaggaacccctcac
atcaaagcatatgacgaagagagcgtagcctctctgagcaccacacaagatgagacccag
gactgtttccagttgaataacgggacgccaaattccaactatctattgcaaggtggatac
atgttggctgcatcctattggccaaaggatcgagttatgattaaccgactagacagtatt
tgtcaaacagtgttgaaaggtaaatggccttcggtaagaagaagttacgacagcaataca
gtagcgtctttctacacaaccaaacttctggacagcccgggtgcagctgcagactacagt
gaacctagtgcaccaacaccaccaactgcaggtgttaaggaagaacatgatcagtcgcca
cagatgccaaaggtgaagaagcatgtacgagaaaaggagtttacagtgaaaatcaatgac
gaaggtggtttgaagttgacttttcagaagcaggggttttctcaaaaaaggctgtttgaa
agtgaagaaggcacgttaggacagcagcaatacctggctcggctacgtgagctccagaat
gcttcagagaccagccttgtcaattttccaaaatccttaccagaatcaggcgcttccagt
cagttaacagttaatgctaatggagtgatagtcgacagccagcctgtagtcaaaaagagg
agaggaaggaggaagaatgtagaaggagttgacatcctctttataaatagaaataaacca
tctaatcatgttagtccaggtattaacacctcgcaagttgctccagtaataaacccaaca
cttacttatgctcagtcccaaggtctacttgacgcagaaagcccagttcctgtcattaac
ctgaaagatggaacgagacttgcaggtgatgatgcaccaaaaaggaaggatttagagaaa
tggcttaaggaacatcctggttatgttgaagatttaggagcttttattcctagaatgcag
cttcatgatgggaggcccaaacaaaaaaggcaccgttgtcgaaaccctaataaactggat
gttaatagtctcactggtgaagaacgggttcagctgatcaatagaagaaatgctagaaag
gtgggaggtgcttttgctccaccgctgaaggacttgtgcagattcttgaaagaaaatcct
gagtatggagtagctcctgaatggggagatgttgtgaaacagtctggatttcttcctgaa
ggtatgtttgaccgtattctcaccgggcctgttgtacgagaagaagtaagcaggagaggg
agacggcctaaaagtgagattgccaaggcaacagctgcagcagcagctgcaacggcagca
aatgtttcggtcaaccctttgctagccaatggattacttccaggagtggatctgtctact
cttcaggccttacagcaaaacctgcagaacttgcaatcactgcaagtaacagcaggatta
atgggaatgcctgctggactaactactggaggagaagctaagaatatggctgccatgttc
cccatgctactgtcaggaatggctggattaccaaacttgctgggtatgggaggactccta
acaaagtctacagaatctgtttcagaggagaaaaagggaaatgactcaaaagagccagtt
gtaaagaaagaaaggacagaaaaccaacatgcagataatggtggtgaagactctgtgtca
agttctccctctacgtcctctgctgctgccaaccctttagctcttaacccattacttttg
tccaatatactttatccagggatgcttctcactccaggccttaatcttcatatcccagca
ttgtcccaatccaatatttttgatgtacagaatgctgaaaacaatgatacaggctcagcc
aagcctacagaggaaaaggaggaaaattctagggttagagatcaggaagacaaaggggga
acagagccaagctctcataatgaaaacagcacagatgagggttcagagaaagcagatgct
tcatctggatctgacagtacatcatcttcatctgaggattcagattctagtgatgaagac
tga
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integrated database retrieval system
