Dermochelys coriacea (leatherback sea turtle): 119841365
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Entry
119841365 CDS
T09064
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119841365 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcc03019
]
119841365 (EDC4)
Messenger RNA biogenesis [BR:
dcc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119841365 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
119841365 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_HPS5
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
CelTOS
Motif
Other DBs
NCBI-GeneID:
119841365
NCBI-ProteinID:
XP_038224668
LinkDB
All DBs
Position
12:complement(5842889..5896325)
Genome browser
AA seq
1401 aa
AA seq
DB search
MASASIDIEDATQHLRDILKLDRPAGSVNENQRPPNSYNGDLNGLLVPDPVAAGDGAPLA
KPMLRTVPLGTLQEKQVICLSGDDSSTCVVISAKDVEIVASSDSSITSKARGSNKVKIQP
VARYDWEQKYYYGNLIAVSNSYLAYAIRGASNGSAMVRVLSISTAERTLLKGFTGGVADL
AFAHLNSNQLACLDEAGNLFVWCLAMDNGKIQEEILVNIKRPEGTPLNSFRRIIWCPFIP
DENEESGEEGSQTLALLHEDRAEVWDLDIIRANNSSWPAEVTNIKEGFIVVKGHSTCLSE
GALSPDGTVLATASHDGYVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQDP
EVPFWRFLITGADQNRELKMWCTVSWTCLQTVRFSPDIFSSKSVPPSLKACLDLSAEFLI
LSDVQRKVLYVMELLQNQEEGRAYFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLPAEE
ESDSLSTEGVQGAGAVESAAGVLIKLFCVHTKALQDVQIRFQPLHSPDMAAPIPPHGSHE
DFAFPDHLADLGAEGLGSEKGSIHGSQPDLRRIADLPVPADFLALSNDAKPKLMTPDAFM
TPSTSLQQIAVSPGSSVSSLTAVTAMSSASVNDPAVPRPSEDLTLSPKMQLDTSLTLSSS
SSSLQTSPRSHSVLIPGLSDKLTPKAPVPVTPANPSLALELQEVEPLVVAQASPTRERSP
DVISSASTAISQDIPEIASETLQRSFAAAPAGLPAEVLEPNHHADSMASAASALHLLSPR
NRHNSEHSQHSLDMASVEVDRLTTPSLLETALTQENASSNSVVSQPWPAAPDITRETRNS
IADSPRDDVAEKHKSSSYHRHSYHLLQHDSQDASAEQSDHDDEVASLASTSGGFSAKASA
QRLPVKDWKAKVSPRASPKLKRKGKKDDGDVTQSPRSCDRQVTAECQDELMSLLRSQQRE
LTELRQNQMELMQRLTDHLDAVQSSLMGHMERVIDSQQEQEQRRLDRALTEGQQRNGQLQ
EHLSQQLSQSLSTAACNRLERTIREEMKKTVPQCISKSLDPVTGQLSNTIAAKLIAVEGT
LKENITKLVKSKNLTDAIARAAADALQGPIQSAYKEAFQSVVLPAFEKSCQSMFQQINDT
FKQGTQEYIQQLETHMKNKKARDQEARDSMLGQLRQLISTFQSSTDQLASTITTSVHTEV
QHQLHVIVSNMQDSILTQVQRVIKGEVSLAMKEQQAAVTSSIVQAMRSAAGTPIPSAHLD
FQSQQTHVLQLLQQGRLNQAFQQTLTAADLNLVLYVCETVDPQQVFGQHPCPLSQPVLLS
LIQQLSSDLGTRTELKLNYLEEAVMHLDHSDPITRDHMGSVMNQVRQKLFQFLQAESHNT
LSKPARRLMIMLQGLVTPSMT
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgccagcatcgacatcgaggacgcgacccagcacctgagggacatcctcaag
ctggaccggccggcaggttcagtgaatgaaaaccagaggccacccaactcgtataacggg
gacttgaatgggctgctggtgccagaccccgttgcagctggagatggagctcccctggct
aaaccaatgctccgaactgttcctctgggaaccctgcaagagaagcaagtcatctgcctt
tctggagatgacagctccacctgcgtagtgatatcggcaaaagacgtggagattgtggcc
agcagtgactctagcatcaccagtaaggccagagggagcaacaaggtaaaaatacagcca
gtagccaggtatgactgggagcagaaatactactatggcaacctgatagctgtatcaaac
tcctacctggcatatgccattagaggtgccagtaatggctctgctatggtgcgggtactg
agcatcagcactgccgagcggaccttgctgaaaggattcacgggcggcgtggcagacctg
gctttcgcccatctcaattccaaccagctggcctgcctcgatgaggctggcaacctcttt
gtctggtgcctggccatggacaatgggaaaatccaagaggagatcttggtgaacataaaa
cgacctgagggcaccccgctgaacagcttccggagaatcatatggtgccccttcatccca
gacgagaacgaggagagtggtgaagagggcagtcaaacgttggcattgctgcacgaggac
agggcagaggtttgggatctggatattatccgagccaacaacagttcctggccggcggag
gtgacgaacatcaaagagggcttcattgtggtgaaaggccacagcacgtgcctgagcgag
ggagcgctctctccagatgggacggttttggccacagcaagtcacgatggctatgtcaaa
ttctggcagatctacatagaggggcaagatgagccaaggtgtctgcatgaatggaagccc
catgatggcaggccgctctcctgcctgctcttctgtgataatcataaaaaacaagaccca
gaggttcctttctggagatttctcatcactggagcggatcagaaccgagagctgaagatg
tggtgcaccgtttcttggacctgtctgcaaactgtccgcttttcccctgacatcttcagt
tccaagagtgttcccccaagtctgaaagcctgcctggacctctctgctgaattcctgata
ctgagcgatgtgcagagaaaagtcctgtacgtgatggagcttttgcagaaccaggaggag
ggcagagcttacttcagctccatctcggagttcctcctcacccacccagtcctgagcttc
ggcatccaggtagtgagccgctgccggctgcggcacacagaggtccttccagctgaagag
gaaagtgacagcctgagtacagaaggtgttcagggggctggggctgttgaatcggccgca
ggtgtgctgatcaagctcttctgcgtccacaccaaggccctgcaggatgtgcagatcaga
ttccagcctcttcatagtccagatatggctgcaccgatccctccccatggctcccatgaa
gatttcgcgtttccagaccacctggctgacctgggcgcagaagggctgggatcggagaag
gggtccatacatggctcccaaccagacttacggcgcattgcagacctgcccgtgccagcg
gattttcttgccctctccaatgatgccaaacccaagctgatgaccccagatgcgttcatg
accccaagcacatctcttcagcagattgccgtgtcaccgggaagcagcgtcagttccctg
actgcagtcacagccatgagcagcgcttctgtcaatgaccccgctgtgcccaggccatct
gaagacctgactttgagcccaaagatgcagttggacaccagcctcacgctgagcagcagt
agcagcagtctccagacgagtcctaggagccattcagttcttatccctggactctctgac
aagctgacaccaaaggcgcctgttccggtcactccagcaaacccctctctggctctggag
ctgcaggaagtggagccccttgtggtagcccaggcctcacccacccgggagcgctcccct
gatgtcatttcctcagcctctacggccatatcccaggatatcccagagattgcctctgag
acgctgcagcgcagctttgccgcagccccagccgggcttcctgcagaggtgctggagccc
aatcaccatgcggacagcatggcctcagctgcatcggccttgcacttgctgtccccgagg
aaccggcacaactcagagcacagccagcactccctggacatggcctccgtggaggtggac
agattgaccacaccctcattactggagactgctttaactcaggaaaatgcatcttccaac
agcgtcgtgagccagccgtggccagcagcccctgacatcaccagggaaaccaggaacagc
atagcagacagcccaagggatgacgttgcagagaagcacaagagctcttcctatcacagg
cacagctaccacctgctgcagcacgacagccaggatgccagcgcagagcaaagtgaccat
gatgatgaagttgcaagtttggcttctacatcaggcgggtttagtgccaaagcatctgca
cagaggctgcctgtgaaggactggaaagccaaggtgtcccctcgagcttcccccaagctc
aaacggaagggcaagaaagatgatggggatgtgacccagtccccgagatcatgtgatcgc
caggtgactgccgagtgccaggatgagctgatgtctctgctgcggagccaacagagggag
ctcacagagctgagacagaaccagatggaactaatgcagagactcactgaccacctggat
gctgtgcagagctccctcatgggccacatggaacgagtgattgattctcagcaagaacaa
gagcagcggaggctggaccgagctctgaccgaggggcagcagcggaacgggcagctccag
gagcacctgtcacagcagctgtcgcagtccctctccactgctgcatgcaatcgcctggag
aggaccatccgcgaggagatgaagaagacagtgccccagtgcatttccaagagcctggat
cctgtcactggccagctgagcaatacgattgccgccaagctcatcgccgtcgaggggaca
ttgaaggaaaacatcaccaagctagtgaaatcaaagaacctgacagatgccattgcgagg
gcagcggcggatgctctgcaggggcccatccagtcagcatacaaggaggcgttccagagc
gttgtattgccagcgtttgagaagagctgccagtccatgttccagcaaatcaacgacacc
ttcaagcaggggacgcaggaatatatccagcagcttgagactcacatgaagaacaagaag
gcgcgagaccaggaggcccgagactccatgctgggccaactccggcagctgatcagcacc
ttccagagcagcacagatcagctggcctccaccatcacaaccagcgtgcacaccgaagtg
cagcatcagctgcatgtcattgtgagcaacatgcaggactctattctgacccaggtgcag
agggtcatcaagggagaggtgagcctggccatgaaggagcagcaagcggccgtcacctcg
agcattgtgcaggcgatgcgttccgcagcaggcacacccatcccctctgctcacctggac
ttccagtctcagcagactcacgtcctgcagctgctgcagcagggccgcctcaaccaggct
ttccagcagactctcacagcagctgatctgaacctggtcctatatgtctgtgagacggtg
gatcctcagcaggtgtttggacagcacccatgtccgctctcccagcccgtcctcctgtct
ctcattcagcagctctcctcagatctgggcacccgcaccgaactgaaactgaattacctg
gaggaggcagtgatgcacctggaccacagcgaccccatcacccgagaccacatggggtca
gtcatgaaccaggtgcggcagaagctcttccagttcctgcaggcagaatctcacaacacc
ctgagcaagccggcccgccgcctcatgatcatgcttcagggcttggtcacccccagcatg
acctaa
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integrated database retrieval system
