Dermochelys coriacea (leatherback sea turtle): 119841937
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Entry
119841937 CDS
T09064
Symbol
COL20A1
Name
(RefSeq) collagen alpha-1(XX) chain
KO
K24357
collagen type XX alpha
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
VWA
Collagen
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
VWA_2
NDNF
CBM_4_9
Motif
Other DBs
NCBI-GeneID:
119841937
NCBI-ProteinID:
XP_043352117
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All DBs
Position
13:complement(6356207..6447358)
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AA seq
1472 aa
AA seq
DB search
MLCHRSFLFACITLASHVIGHVHGQGPNRLKLTVLSEDRLQMKWKETEGNISGYKVQVKP
MAGDLEQEVMLKTKTPKATVGGLSPTKEYTLQIYVLNGSQEALFAKRKFVIRELKNISQA
RNTRRNTATSPGKSITPLRNTATEHIPVAKTTSPAPSEASTLTAKDRPEKRRQKAAVSKD
SSEALGRKPNTKFSVTETPTTLKTTLRGPTKSERDLGQEKHTKGTLKRGPQFQCDTSATT
DIVLLVDGSWSIGRSNFKLVREFLSTLVSPFNIARDKIRIGLSQYSSDPRTEWNLNTYVT
RDEVLEAVRNLRYKGGNTFTGLALSYVLEQNLKPEAGARSDAVKLVILLTDGKSQDNANL
SAQTLKNMGIEIFAIGVKNADEAELRQVASEPLELTVYNVLDFPLLSSLVSRLTRVLCTR
IKEKRKNENTDSPVKAVSANTGPHLSPTNLIISEVTSRSMHLSWIPPLRPPKKYRIVYYP
SRGGIPKEVVLDGSASSTQLVNLTSHTEYLVSVFPIYENAVGDGLRGITSTSLSPPLSLR
ASKVSHNSLTLSWQPSSGATQYLVICSAGPNGAEDDTKEVKVEQPEVLLDGLSPSTEYSV
AVYAMYGEEASDPASIQETTLALIPPRHLSFSEIGHGAVKVSWDAASRAVRAHRVTYISS
RGSNAGEVEVPSSASSTMLRPLSSLTQYFISVSSIYSEGESFPLTGNVTTLKVPPPGDLK
VTELSGNNVQLQWEAAAPSDVLVYQIKWNALGEESSQELSVAGNLAAASLPGLKKNTEYQ
ISIWAYYKDGARSDTVSILHRTTSQSPPTDLVIDSETPNSLQVHWRPPGSHIQYYRVTYI
PESDDSAQQTIMVSGKSSGVTLQSLLPNTAYKVMVFAVHDAGESDAVSATGQTGRQITSV
LAKLPSTQGFVPFKTDACPTISSTEGSLQGFDMMEAFGLVEKEYASIKGVAMEPYVFSRT
RTYTLFRDIQLTQRTSEVLLSGIPSVHTISILLRLLPETPKVPFAVWQLTDEDFQPFLGI
ILDSSKKSLTYFNHDYKADLQEVTFDQQEVKKIFYGSFHKVHVAVSHFRIKLYLDCKKIA
EKPINAMGSISTAGFIMLGKLTGTRGPRSGSAAFQLQSLQIVCSGSWAEEDRCCDLPALR
NEETCPTLTPSCTCTSGIPGPPGPPGSPGSPGRRGPQGEPGPKGEPGSPGQVGPEGPSGQ
QGSLGSQGITVQGPVGPPGIKGDKGDTGIPGMQGIPGAQGAPGRDGIQGAKGVRGLEGTA
GPPGPPGPRGFQGITGARGSSGERGPPGDVGPTGLPGPKGERGEKGEPQSLATIYQLVSQ
ACEQMIQTHVLKFDSFIHEHTRKPVPVWDDTLKPGGPGPPGLPGIAGTRGERGEDSIPGQ
PGKDGYPGERGGPGPKGEKGMAGAREEEVQGPRGRAGPPGEQVIGDSGLKSSPRSTGPPG
FPGARGNPGAPGYPGGCANSGCYRASTRDFIP
NT seq
4419 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgtcaccgttccttcttgtttgcctgcataaccttggcaagtcatgtcatagga
cacgtgcatggtcaagggccaaaccggttgaaactaaccgtcctctcagaagacaggcta
cagatgaaatggaaagaaacagaagggaacatcagtgggtacaaggttcaagtgaagccc
atggcaggtgacctggaacaggaagtcatgctgaaaaccaaaacgcctaaggcaacagtg
ggagggctgagccccacgaaggaatacaccctgcaaatctatgtgctcaatggctcccaa
gaagccctgtttgctaaaaggaaatttgtgattcgggagctgaaaaacatctcgcaggct
agaaatacccgaaggaacacagcgacctccccaggaaagagcatcacccctttgagaaat
acagcaaccgagcacattccagtggctaagacaacgtcaccggctccgagcgaagcctca
acactgacagcaaaagacagacctgaaaagagaagacagaaggcagcagtatccaaggat
tcaagtgaagccctcggcaggaaaccaaacaccaagttcagtgtgacagaaacaccaaca
acgctgaaaacaactctgcgcggtcccacaaaatctgagcgagatctaggccaagaaaaa
cacacaaagggaactttaaagagaggtcctcagtttcaatgtgacacatctgccacaact
gatattgtcctgctggtggatgggtcttggagtattggacgcagtaacttcaagcttgtc
agggagttcctgagcaccttggtttcacctttcaatattgcccgggataagataaggata
ggtttgtcccagtacagcagtgatccacggacagagtggaacctgaacacctatgtcaca
agggacgaggtgttagaggcggtgaggaacctgcgatataaaggcggcaacactttcaca
ggcctcgctttgtcctatgtcctagaacaaaatctgaaacctgaagctggcgccaggtcg
gatgcagtcaagctggtgatcctcttgactgatggaaaatctcaggataatgccaacctg
tctgcccagaccttgaaaaatatgggcatagagatatttgccattggggtgaaaaatgca
gatgaggcagagctgagacaggtggcatcagagcccctggagctcactgtttataacgtg
ctggatttccccctgctcagctctctggtcagccggctcacccgggtcttgtgcaccagg
atcaaagagaagcgcaagaatgaaaacacagacagtcctgtgaaagctgtctctgccaac
actggtccccatctgagtcccaccaaccttataatatcagaggtgacctccagaagcatg
cacctttcctggattcctccgctgagaccaccaaagaaatataggattgtatattaccca
tccaggggaggaatccccaaagaggtagttttagatggatctgcctcctccactcagctt
gtcaatttgacctcgcacacagaatacctggtttcggtgtttcctatttatgaaaatgcc
gttggagatgggctgaggggcatcacctcgacatctttgtcaccacccctttccctgcga
gcatcgaaagtgagccacaacagtctaacactgagctggcagccgtcaagtggagctact
cagtacctggtgatctgttcagcaggccccaatggagcggaggatgataccaaagaggtg
aaagtggaacagcctgaggttctgctggacgggctgtctcccagcacagagtactcagta
gcagtgtatgcaatgtacggagaagaggcaagtgatccagccagcatccaggaaaccacc
ttggcactgatccctcctagacacctgagtttctctgagatcggccatggggctgtcaag
gtcagctgggacgcagcttcgcgtgctgtgagagctcaccgtgtgacctacatctcaagc
agagggagcaatgccggggaggtcgaagttcccagcagtgcatcatccactatgctgaga
cctctgtcctctctcacccagtacttcattagtgtcagctccatttatagtgaaggcgaa
tcctttccacttacaggcaatgttaccacattaaaggttccaccaccaggtgacctgaag
gtgactgaactctcaggaaacaatgtccagttgcaatgggaagccgccgctccctctgat
gtcctggtttatcagattaaatggaatgcactaggagaagagagctcccaggagctgtct
gttgctgggaacttggctgctgccagcttaccaggattgaaaaaaaacacagaataccag
atatcgatctgggcatattacaaggatggagctcgaagcgacactgtctcaattctgcac
agaactacttcccagagcccacccaccgacctcgttatagactccgagacccccaatagc
ctgcaggtccactggagaccccctggcagccacatacaatactaccgagtaacctacatt
cctgaatctgatgacagtgctcagcaaacaataatggtttctggtaaaagcagcggcgtg
accctgcagtcgctgcttcccaacacagcatacaaggtgatggtttttgctgtccatgac
gcaggagagagtgacgctgtgtctgcaactggccaaactggtaggcagatcacttctgtc
ttggctaaactgccctcaacacaaggctttgttcccttcaaaacagatgcttgccccact
atcagttccactgaaggctctctgcaaggatttgacatgatggaggcttttggactggtg
gaaaaagaatatgcatccattaaaggagtggccatggaaccgtatgtgttcagcaggacc
cgtacttatactctcttcagagatattcagctaacccagagaacaagtgaagtgcttctc
tctgggattccgtctgtgcacaccatcagcatcctcctccggctccttccggagactccc
aaagtgccctttgctgtgtggcagctaacagatgaggacttccagccattcctcgggatt
atacttgactccagtaagaaatccttgacctatttcaatcatgactacaaggctgattta
caggaagtcacctttgaccaacaggaagtgaagaagatattctatgggagctttcataag
gtgcacgtagctgtgagccatttcaggatcaaactctacttggactgtaagaaaatagca
gagaaaccgatcaatgctatgggaagcatctccactgctggcttcatcatgctaggaaaa
ctgacaggaaccagaggacccaggagtgggtcagcagcattccagctgcagtctttacag
atagtttgcagtggctcatgggcagaggaagatagatgttgtgatctcccggcactgaga
aatgaagagacctgccctaccttaacgccttcctgcacctgcacttcaggtatcccaggc
ccgccaggtcctccagggtcccctggcagtcctgggagaagaggaccacaaggggaacca
gggccgaagggtgagccaggttctcctggacaagtcggaccagagggtcctagtggacaa
caagggtcactaggctcccaaggaatcaccgtgcagggcccagtgggaccaccaggaatt
aaaggggataaaggagacactggaatcccaggcatgcagggtattcctggtgcccaggga
gccccaggcagagacggcattcagggcgcaaagggggtgagaggactggaaggcacagca
gggcctccggggccaccaggacccaggggtttccaaggaataacaggtgcccgaggcagt
agcggagagcgaggacctccaggtgatgttggacccacaggtctgcctggtccaaagggg
gaaaggggagagaaaggtgaaccacaatccctggccaccatttaccagctggttagtcag
gcttgtgagcagatgattcagacccatgtgttgaaattcgactcattcatccacgaacat
acaaggaagccagttcctgtgtgggatgacacattgaagccaggaggacctggaccacca
ggtcttccgggtatcgctggtaccagaggagaaagaggagaagacagtatcccaggacag
ccaggcaaagatgggtatcctggggaaagaggaggaccaggacccaagggtgagaaaggg
atggctggagccagggaggaagaagtccagggaccaagaggacgagcaggccctccagga
gaacaagtcataggggactcaggtctgaaaagttcccccaggagcactggtcctccaggt
tttcctggtgccagaggcaatcctggggcacctggctacccaggtggttgtgctaactct
ggatgctacagggcaagcacaagagatttcatcccctga
DBGET
integrated database retrieval system
