Dermochelys coriacea (leatherback sea turtle): 119842964
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Entry
119842964 CDS
T09064
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119842964 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dcc03041
]
119842964 (DDX5)
03009 Ribosome biogenesis [BR:
dcc03009
]
119842964 (DDX5)
Enzymes [BR:
dcc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119842964 (DDX5)
Spliceosome [BR:
dcc03041
]
Complex A
U1 snRNP components
U1 related factors
119842964 (DDX5)
Complex B
119842964 (DDX5)
Ribosome biogenesis [BR:
dcc03009
]
Eukaryotic type
Pre-60S particles
Helicases
119842964 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
119842964
NCBI-ProteinID:
XP_038227760
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All DBs
Position
14:8846686..8855006
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AA seq
602 aa
AA seq
DB search
MPGYDMDRGFGGPRFGGSRGGPLSGKKFGNPGEKLTKKKWNLDELPKFEKNFYQEHPDVV
RRTVQEVEQYRASKEVTVKGHNCPKPLINFYEANFPANVMEVIQAQNFTEPTAIQAQGWP
VALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQV
AAEYSRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLV
LDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGALE
LSANHNILQIVDVCHDVEKDDKLIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRDGW
PAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYI
HRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLIEDRGSGRSRGD
RRDRYSAGKRGGFGSFRERENFERTYGAVGKRDFGAKAQNGGYSAQTYSNGTPFGNGFAA
AGMQAGFRAAGNPAGAYQNGYDQQYATNIATMHNGMNQQQYAYPATGAAPMIGYPMPAGY
TQ
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggtacgacatggacagaggttttggtggtcctcgttttggaggaagcagaggt
gggcctttatctggaaagaaatttggaaaccccggagaaaaactcacaaaaaagaaatgg
aacctagatgaactgcccaaatttgagaagaatttttatcaagagcatcctgatgtagtt
agacgcactgtgcaagaggttgaacagtacagagcaagcaaagaagttacagtgaagggc
cataactgtccaaaaccacttataaatttttatgaggctaactttcctgcaaatgttatg
gaagtaattcaggcacagaatttcactgaaccaactgctattcaggcacaaggatggcct
gttgctttgagtggactggatatggttggagtagcacagactggatcaggaaaaacattg
tcttacttattgcctgccatagtgcatataaaccatcagccattcctagagcgaggagat
ggacctatttgtctggtgctggcaccaactcgagaactggctcaacaagtgcagcaagtg
gctgctgaatatagcagagcatgtcgtttgaagtctacttgtatttatggaggtgctcca
aaaggaccacaaattcgtgatttagaaagaggtgtggaaatctgcattgcaacacctgga
aggctcatagactttttagaagctggaaagaccaatctcaggagatgtacttaccttgta
cttgatgaagctgacagaatgcttgacatgggatttgaacctcagatcagaaaaattgta
gatcagataaggcctgacaggcaaactctaatgtggagtgcaacatggcccaaagaagtt
agacagctcgctgaagatttcttgaaagaatatgtacacatcaacattggggcattggaa
ctaagtgcaaaccacaacattcttcaaattgtggatgtatgccatgatgtggagaaggat
gacaaacttattcggttgatggaagaaattatgagtgagaaagaaaacaaaaccattgtg
tttgtggaaaccaaaagacgatgtgatgatcttaccagaaaaatgagaagagatgggtgg
ccagcaatgggtatccacggtgacaaaagccagcaggagcgagactgggttctaaatgaa
ttcaaacatggaaaagctcccatcctgattgctacagatgttgcatccagaggtctagat
gtggaagatgtgaaatttgtcatcaattatgactaccctaactcctcagaggactatatc
caccgaattggacgaactgcccgcagtaccaaaacaggcacagcctacacattctttact
cctaacaatataaagcaagtaagcgacctcatctctgtgcttcgggaggctaatcaagct
atcaaccccaaattgcttcagttgattgaagacagaggttcaggtcgttcccgaggtgat
cgacgtgacagatattctgcgggcaaaaggggtggatttggtagttttagagagagagag
aattttgagagaacttacggtgcagtagggaagagagacttcggagcaaaagcccaaaac
ggtggctacagtgctcaaacctacagtaatggaactccatttggaaatggctttgcagct
gctggcatgcaggctggcttcagagctgctggtaatcctgcaggagcttaccagaatggt
tatgatcaacagtatgcaactaacattgcgactatgcacaatggtatgaaccaacagcag
tatgcatatcctgccactggtgctgctcctatgataggttacccaatgccagctggttat
actcaataa
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