Dermochelys coriacea (leatherback sea turtle): 119843257
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Entry
119843257 CDS
T09064
Symbol
ABCA5
Name
(RefSeq) cholesterol transporter ABCA5
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
119843257 (ABCA5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dcc02000
]
119843257 (ABCA5)
Transporters [BR:
dcc02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
119843257 (ABCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
RsgA_GTPase
AAA_29
AAA_22
AAA_23
nSTAND3
MMR_HSR1
ABC2_membrane
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
119843257
NCBI-ProteinID:
XP_038228290
LinkDB
All DBs
Position
14:6288692..6347607
Genome browser
AA seq
1643 aa
AA seq
DB search
MATETAGVWRQTKALLFKNYLVKCRTKKSSVQEILFPLFFLFWLILMSMMHPNRKFGEVP
NTDLGTLDRSMLLDFILGYTPVTNMTRKIMQKVSFEYFADGVITEEFFSEKELQEASTVN
PSNFVGVVFKDSVSYQLRFFPGAVTVSSINVESRASCSSLSNGCESVTYWYSGFAALQAC
IDAAIIQLKTNHSVWEELESTKAIIMGEAADMKIDYFPRAIILIYLIIAFSPFGYYLAIH
IVAEKEKKLKEFLKIMGLHDTAFWLSWVLLYTTLIFVMSILMAVIATASSLFPQSSSFVI
FLLFFLYGISSVFFAFMLTTLFKKSKHVGVVEFLATLAFGFVGLTIVLLDDFPKSFVWIL
SPLCQCTFLIGIAQVMHLEDYQDGAIFSNLNHGPYPLVISLILLVLDSMFYLLLAVYLDQ
VIPGEFGLRRPSFFFMKPSFWSKRRRNYKELYESSVNGSLSFSEMVEPVSSEFQGKEAIR
ISSVQKTFSKKGETVEALRSLSFDIYEGQITALLGHSGTGKTTLMNILCGLCPPSDGFAS
VYGHRISEIDEMLDVRRITGVCPQLDIHFDVLTVEENLSIFAHIKGISPNLLIQEVQKVM
NDLDMQPIRDNQAKKLSGGQKRKLSIGIAVLGSPKVLLLDEPTAGMDPCSRHIVWNLLKN
RQANRVTVFSTHFMDEADILADRKAVISQGMLKCVGSSLFLKTKWGIGYRLSMHIDGYCN
IEATTALIRQHIPEASLVQQNELQLVYTLPFKDMDKFSGLFSDLDTHSHLGVITYGVSMT
TLEDVFLKLEIEAEIDQADYSIFNSQSAGEEMDTKSFDEMEQSLLILSETKSSAASNTAL
WKQQVSTIAKVHFLNLRRENKSVGIMLLLFLVFLVVQILMFLIHHYFKNSVVPIKLSPDL
YLLKPGEKYFKYKTSLLLQNSTGSNIDDLISALRSRKILTAMFNDSDYVSAAPHSAALNV
SLSEQSYIFTAVFNSTMVHSLPVLMNIISNLFLRNLNVTENIQIWSNPFIQETDETVFRL
EAFFQAMLLGIIVTGVPPYFAMENAENHKIKAYTQLKISGLYPSAYWSGQAVIDLPLFFI
ILVLMIGSLFAFHHGVYFDTWKFLAVIFCLIGYVPSVVLFTYVLSFTFKKVQNTKEFWSF
IFSMTALISTAVTEVAFFLRYFMVTTIFHYVFCAFIPIYPLIGCLITFIKISWKHLQKNE
KYHDPWDKLLVAVIAPYLQCVVWLFLLRYLEVKNGGKSIKEDPFFRTTTKIKTWKFQDDP
HNENEDEDVKAERLWVKEKTTCQSCDEKPAILVSSLHKEYDERKDFLLGRKIKKVATKHV
SFCVKKGEILGLLGPNGAGKSTLINMLVGDVEPTAGQVLMGDYSLGLNSEDNSAKFVGYC
PQVNPLWPDITLQEHFEIYGSVKGMSKTDVEEVVKRIASALELKNHLQKTTKKLVVGIKR
KLCFALSMLGNPLITLLDEPSTGMDPKAKQHMWRAIRAAFKSKERAAILTTHYMEEAEAV
CDRVAILVSGQLRCIGSVQHLKSKFGRGYFLEIKLKETAGVQQVEFLHRQILHIFPNANH
QESFASILAYKIPKEDVQSLSQSFSKLEEAKHVFNIEEYSFSQATLEQVFVELAKEQEEE
DNSFGTLNSTLWWERTQEDRVIF
NT seq
4932 nt
NT seq
+upstream
nt +downstream
nt
atggccacagaaactgcaggagtgtggagacaaaccaaagctctcttattcaagaactac
cttgttaaatgcaggactaagaagagtagtgtgcaggaaatcctttttccactatttttt
ttattttggcttatattaatgagcatgatgcatccgaataggaagtttggcgaggtgccc
aacactgatcttggtactttagatcgctccatgctcttggacttcattcttggatacaca
ccagtgacaaacatgacaagaaaaatcatgcagaaagtgtcttttgaatattttgcagat
ggtgtaattacagaagaatttttcagtgaaaaagagttgcaagaggctagtactgttaac
ccctccaactttgttggtgtagttttcaaagattctgtgtcctaccaacttagattcttt
cctggtgctgtcacagtgtcttctatcaatgtagaatcaagagccagttgttccagttta
tcaaacggatgtgaatctgttacatactggtactcaggatttgcagctctacaggcttgt
atcgatgcagcaataatacagctgaagactaatcattcagtttgggaagaactggaatca
actaaagctattattatgggagaggctgctgatatgaaaattgattattttcctcgagca
attattttaatttacctaataatagctttctcaccctttgggtactatttggcaattcat
attgtggcagaaaaggagaagaagttgaaggaatttttaaagataatgggccttcatgac
accgccttttggctgtcttgggttctactgtacacaactctgatttttgtcatgtccatt
ctcatggcagtcattgcaacagcctcttcactatttccccaaagtagctcctttgtgata
tttcttctttttttcctgtatggaatatcctcagttttctttgctttcatgctgacgact
ctatttaaaaaatcaaagcatgtcggtgtagttgaatttttggcaacactggcttttggt
tttgtgggtctcactattgtcctgctggatgattttccaaagtcttttgtatggatccta
agccccttgtgtcagtgtacgttcttgattgggattgcacaggtcatgcatctggaagat
tatcaagatggtgcaatattttcaaatttaaatcacggtccttatccgctagtaatttct
cttattttactggttctggatagcatgttttacctacttctagctgtctatcttgatcag
gtcattccaggtgagtttggattacgacggccatcatttttctttatgaagccctcattt
tggtcaaagcgcagaagaaattacaaggagttatatgagagtagtgttaatggaagctta
agtttcagtgaaatggttgaacctgtatcttcagaatttcagggaaaagaagctatcaga
atcagcagtgttcagaaaacattcagcaaaaagggtgaaactgtggaggctctcagaagc
ttatcctttgacatatatgagggtcagattacagctttacttgggcatagtggaacaggc
aagacaacactgatgaatattctttgtggactctgcccaccttctgatgggtttgcatct
gtctatggacacagaatctctgaaattgatgaaatgcttgatgtaagaaggataacgggg
gtttgcccacaattagatatacattttgacgtattaactgtggaagagaatttatcgatc
tttgctcatattaaagggatatctcccaatcttctgatacaagaggtgcagaaagtgatg
aatgatttggatatgcagcccatccgagataaccaagctaaaaaattaagtggagggcag
aaaagaaagctatcgataggaatcgctgttcttgggagcccaaaggttttacttttggat
gaaccaactgctggtatggacccatgttctcggcacattgtttggaatctcctgaaaaac
agacaagccaatcgggtaacagtattcagtactcatttcatggatgaggcagatattctt
gctgatcgaaaagctgtgatttctcaagggatgctgaaatgtgttggctcatctctcttt
ctcaaaaccaaatggggaattggctaccgcttgagtatgcatatagatgggtattgcaat
atagaagctacaacagccttgatcagacagcatatccctgaagccagcttggtacaacag
aatgaactgcagcttgtgtataccttaccttttaaagacatggacaagttttcaggatta
ttttctgatctagacactcattcacatttgggtgttattacttatggagtttccatgaca
accttggaagatgtgttcctgaagttggaaattgaagcagaaattgatcaagcagattat
agcatatttaattcccagtcagcaggcgaggaaatggatacaaaatcgtttgatgagatg
gaacaaagcctactgatactctctgagacaaaatcatctgcagcaagcaataccgctctc
tggaaacagcaggtgtctactatagcaaaggttcacttccttaacttaagacgtgaaaat
aagtcagtgggaattatgttgttgctttttttagtttttcttgtagttcagattttaatg
tttcttatacatcactacttcaaaaattctgtggttcccatcaaactttccccagatttg
tacttgctgaagcctggagaaaaatatttcaagtacaaaacaagtctcctccttcagaac
tcgacaggatcaaatattgatgatctcatcagtgctctcagaagccggaagatattgact
gcaatgttcaatgacagtgattacgtgtcggctgcaccccatagtgcagctttaaatgtg
tcgctttcagaacagagctacatttttacagctgtattcaacagtactatggtgcactct
ctgcctgttttgatgaacatcattagcaacctgtttctccgcaacttaaatgtgaccgag
aatattcaaatctggagtaacccattcattcaagaaactgatgagacagttttcagactg
gaggctttttttcaagcgatgttactaggaatcattgtaacgggggtgccaccatatttt
gccatggaaaatgcagaaaaccataagatcaaagcctacactcagcttaagatctcaggt
ctttatccatctgcttactggagtggacaagcagtcattgacttacctttatttttcatt
attcttgttctgatgataggaagcttatttgcatttcatcatggtgtttattttgatact
tggaagttccttgctgttatcttctgccttattggctatgtgccatcagtagtgctgttc
acttatgtgctctctttcacctttaaaaaagtgcaaaataccaaagaattttggtcgttt
attttttcaatgactgctttgatctctactgctgtcactgaagtagcattctttctgaga
tatttcatggtaaccaccatttttcattatgtcttctgtgccttcattcccatctatcct
cttattggatgcctgattacttttataaagatatcatggaaacacctgcaaaagaatgaa
aaataccatgacccctgggacaaactcttggtagcagttatcgcgccttatttgcaatgt
gtagtgtggctgttcctcctgcgatatcttgaagtgaaaaatggaggtaaatcgataaaa
gaggacccatttttcagaactactacaaagatcaaaacatggaaatttcaagatgatcca
cataatgagaacgaggatgaagacgtgaaggcagagagattgtgggttaaagaaaagaca
acctgccagagctgtgatgagaaaccagcaattctggtcagtagtctgcataaagaatat
gatgaaagaaaggattttcttcttgggagaaaaataaagaaagtggcaactaaacacgtc
tctttttgcgtaaaaaaaggagaaatacttggattgctaggaccaaatggagctggaaaa
agcacactgattaacatgctggtgggagacgttgaaccaactgctggccaggtgctgatg
ggagactattctttaggattgaacagtgaggataattctgctaaatttgtgggatattgt
cctcaagtaaatccactttggccagatattacgttgcaggagcattttgaaatatatgga
tctgtcaaaggaatgagtaaaactgatgtggaagaagttgtaaaacgcattgcaagtgcc
cttgagttgaaaaaccatctacagaaaacaacaaagaaattagtggttggaattaaacgc
aagttatgttttgcgctaagtatgctgggtaatcccctgattacattgctagatgaacca
tctactggtatggatcctaaagccaaacagcatatgtggagggcaattcgagcagcattt
aaaagcaaagagagagcagctattctgaccactcattatatggaagaggctgaagctgtg
tgtgatcgagttgcaatcctggtgtctggacagttaaggtgtattggttcagttcagcat
ctaaagagcaaatttggcagaggctatttcttggaaattaaattaaaagaaacagcaggc
gtacaacaagtggagtttcttcacaggcaaattttgcacatcttcccaaatgcaaatcat
caggaaagttttgcctccattttggcatataaaattcctaaggaagatgtacagtcgctc
tctcagtctttttctaaactggaagaagccaaacatgtctttaatatcgaggagtacagc
ttttctcaagcaaccctggaacaggtttttgtggagcttgctaaagaacaagaagaggaa
gataacagttttggaaccttaaacagcacactttggtgggaaagaacacaggaagataga
gtcatattttga
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integrated database retrieval system
