Dermochelys coriacea (leatherback sea turtle): 119843789
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Entry
119843789 CDS
T09064
Symbol
TOP3B
Name
(RefSeq) DNA topoisomerase 3-beta-1 isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03440
Homologous recombination
dcc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119843789 (TOP3B)
03460 Fanconi anemia pathway
119843789 (TOP3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dcc03032
]
119843789 (TOP3B)
03400 DNA repair and recombination proteins [BR:
dcc03400
]
119843789 (TOP3B)
Enzymes [BR:
dcc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
119843789 (TOP3B)
DNA replication proteins [BR:
dcc03032
]
Eukaryotic type
DNA Topoisomerases
119843789 (TOP3B)
DNA repair and recombination proteins [BR:
dcc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
119843789 (TOP3B)
FA (Fanconi anemia) pathway
119843789 (TOP3B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
DUF2204
SR1P
Motif
Other DBs
NCBI-GeneID:
119843789
NCBI-ProteinID:
XP_038229571
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All DBs
Position
15:14704135..14728001
Genome browser
AA seq
862 aa
AA seq
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MKTIFMVAEKPSLAQSIAKILSRGNMTSHKGLNGACSVHEYTGSFIGQSVHFKMTSVCGH
VMTLDFIGKYNNWDKVDPAELFSKAPTEKKEANPKLTMVKFLQVEGRGCDYIVLWLDCDK
EGENICFEVLDAVLPVMNKPRGTEKTVYRAKFSSITDTDICNAMNSLGEPNRNEALSVDA
RQELDLRIGCAFTRFQTKYFQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETY
WVLQAKVNHEKESSLTLEWDRVRVFDREIAQMFLNITKMAREAKVESVSKKEKAKQRPLA
LNTVEMLRVASAALGMGPQHTMQIAERLYTQGYISYPRTETTHYPENFDLKESLRQQTNN
PYWAETVKALLSEGVNRPRKGHDAGDHPPITPMRAATEAELGGDGWRLYEYITRHFIATL
CADCKYLQTTISFIIGPEHFTCVGKMVISPGFTEIMPWQSIPVEESLPSCEKGDVFPVSE
VKLLEKQTNPPDYLTEAELITLMEKHGIGTDASIPVHINNICQRNYVTVESGRRLKPTNL
GIVLVHGYYKIDAELVLPTIRSAVEKQLNLIAQGKANYQQVLEHTLDIFKRKFHYFVDSI
AGMDELMEVSFSPLAATGKPLSRCGKCHRFMKYIQAKPSRLHCSHCDETYSLPQNGTIKL
YKELRCPLDDFELVLWSSGSRGKSYPLCPYCYNHPPFRDMKKGMGCNECTHPTCQHSLSM
LGIGQCVECENGVLVLDPTSGPKWKMACNKCNVIVHFFENAHKVRVSPETCESCDAALVD
VDFNKAKSPLPGDETQHSGCVFCDPVFQDLVELKHAATRHPMHRGGQGKRQGRGRGKGRR
PGGRPNPKRPKDKMAALAAYFV
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccatatttatggttgcagagaagccttctctggctcagtctatagccaagatc
ctctccagaggaaacatgacctcccataaagggctgaatggagcatgctctgtacatgag
tacacgggatcattcatagggcagagtgtccacttcaaaatgacatctgtgtgtggtcat
gtgatgactctggatttcataggaaaatataacaattgggacaaagtggatccagcagaa
ctttttagcaaagcccctacagaaaagaaagaagctaaccccaaattgactatggtgaaa
tttttacaggtggaaggaagaggctgtgactacattgttttatggttggattgtgataag
gagggggaaaacatctgttttgaggttcttgatgctgttcttcctgttatgaataaacct
cgtggcactgaaaagactgtttacagagcaaagttcagttccattactgacacagacatc
tgcaatgctatgaactccctgggagaacccaatcgtaatgaggctctgtcagtggatgcc
cgccaggagctggatctgagaattggctgcgcatttacaaggtttcagactaaatatttt
caggggaaatatggcaatttagacagctcactcatctcctttgggccatgtcagaccccg
acacttggattctgtgtagaaagacatgataaaatccagtctttcaaacctgaaacttat
tgggtgctgcaagccaaggtgaaccatgaaaaagaaagttctctcactttggagtgggat
agagtcagggtgttcgatcgggagattgctcaaatgttcctaaacataaccaagatggca
agagaagcaaaggtagaatctgtgagtaagaaggagaaagcaaagcagagaccactggcg
ctgaacacggtagaaatgttacgagttgccagcgctgctttgggaatgggtccacaacat
accatgcaaatagcagaacgactttatactcagggttatattagctaccctcgaacagaa
acaacccactatccagaaaactttgacttgaaagaatctttgagacagcagactaataac
ccttactgggcagaaacagtaaaggcattgttgtcagaaggtgttaatcgcccaaggaaa
ggccatgatgcaggagaccatcctccaattactccaatgagagctgcaacagaagcagaa
ctaggcggtgatggatggcgattgtatgaatatatcactagacatttcattgccactctc
tgcgctgattgcaaatatctccaaaccaccatttcttttattattggccctgaacatttt
acctgtgtaggaaagatggttatttcaccagggttcactgagattatgccctggcaaagc
atcccggtagaggagagcctccccagctgtgagaagggagatgttttcccagtcagtgaa
gtaaaactgctggagaaacaaaccaatcctcctgattacctgactgaagcagaactcatc
actctgatggagaaacatggcattggaactgatgcaagtatcccagttcacatcaacaat
atctgccagcggaactatgtcacagtggagagtggtcgcagattaaaacctacaaacctt
ggcattgttctggttcatggttactataaaatagatgcagagctagtgcttcctacaatc
cgcagtgcagtagagaagcaactcaacttgatagctcaagggaaagcaaactatcagcaa
gttctggagcacacccttgatatcttcaaaaggaagtttcactactttgttgattctatt
gcaggtatggatgaattgatggaagtgtctttttcaccattagctgccacaggcaaacct
ctttctcgctgtggcaaatgccatcgttttatgaagtacatccaggccaagccaagccgt
ctgcactgttctcactgtgatgaaacatacagccttccccagaatggcaccatcaaactc
tacaaagagctgcgttgccccctggatgactttgagctggtactgtggtcttccggatcc
agaggaaagagctacccactatgtccatactgttacaaccatccacccttcagggacatg
aaaaaagggatgggctgcaacgagtgtactcacccaacatgccagcactcgcttagcatg
cttggaatcgggcagtgtgtggaatgcgagaatggggttctggtgctagacccaacgtca
ggtcccaagtggaagatggcctgcaacaaatgcaatgtgattgtgcacttctttgaaaat
gcccacaaggtgcgagtgtcgccagagacctgcgagtcatgtgatgcggcccttgtggat
gtggattttaataaggctaagtctcccctccctggtgatgagacacagcattcaggctgt
gtcttctgtgaccctgtgttccaggacctggtggagcttaagcacgcagccacgaggcac
cctatgcaccgtggaggacaggggaaaaggcagggtcgaggaagaggaaagggcaggaga
cctggagggagacccaacccaaagagacccaaggacaaaatggcagctctggctgcatac
tttgtataa
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