Dermochelys coriacea (leatherback sea turtle): 119844125
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Entry
119844125 CDS
T09064
Symbol
CACNA1B
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B isoform X3
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc04010
MAPK signaling pathway
dcc04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119844125 (CACNA1B)
04020 Calcium signaling pathway
119844125 (CACNA1B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dcc04040
]
119844125 (CACNA1B)
Ion channels [BR:
dcc04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
119844125 (CACNA1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Tachystatin_A
Motif
Other DBs
NCBI-GeneID:
119844125
NCBI-ProteinID:
XP_038230414
LinkDB
All DBs
Position
16:6947960..7453790
Genome browser
AA seq
2225 aa
AA seq
DB search
MARFGDDLPTRYGGGGPAGAGRGSSRQGGPPPGQRMYKQSMAQRARTMALYNPIPVKQNC
FTVNRSLFIFSEDNVIRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPEDDKTPMSE
RLDDTEPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILATAGTDFDL
RTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGLEFYMGK
FHKTCFSNETGEEVGDFPCGEDPPARQCENGTTCRKYWPGPNYGITNFDNILFAVLTVFQ
CITMEGWTDILYNTNDAAGNTWNWIYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVENR
RAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEEDKNAEEKSPLDGRAASEGPVQQGTAP
AETGGSSYNMLKRATIKKSKNDLIHAEEGEDHFTDICSVGSPFARASLKSGKNESSSYFR
RKEKMFRFFIRRMVKAQSFYWIVLCVVTLNTLCVAMVHYDQPEGLTTALYFAEFVFLGLF
LTEMSLKMYGLGPRNYFHSSFNCFDFGVIVGSIFEVIWAAVKPGTSFGISVLRALRLLRI
FKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFQDETPTTN
FDTFPAAILTVFQILTGEDWNAVMYHGIVSQGGVHSGMFSSIYFIVLTLFGNYTLLNVFL
AIAVDNLANAQELTKDEEEMEEATNQKLALQKAKEVAEVSPMSAANISIAAFVKQTRGTV
SRSSSVSSVNSPKQQNSSKSKSVWEQRTSQIRMHNFRASCEALYNELDPEERVRYATTLH
IRPDMKTHLDRPLVVEPRTEGRNNVGKLSPVDVQETEQAKPTSADSAEVPRKHHRHRDKD
KMGEQEKSDVAKDENGESGTNNKEERHRQHRSHSKEAEGGSKEGKSDRNRSQEGGKRHHR
RGSVEEGAEKEYRRHRTHRHSAEHQAKEGNGTANGARSERRSRHRGGSRSGNREGDPGLK
GENGEEPHRRHKIRHRALSTYESVEKENGEKEGEAGEKDLKNHQPREAPCETEAGGSMSV
IPVHTLPSTYLQKVPEQPEDADNEKNVTRMTQPPLDKTATVNIPVTITAPPGETTVIPMN
NIEFESKTEEKKDMEIDDLTKNGPKPILPYSSMFILSPTNPIRRLFHYIVNMRYFEMVIL
IVIALSSIALAAEDPVQAESPRNDALKYLDYIFTGVFTFEMVIKMIDLGLLLHPGSYFRD
LWNILDFIVVSGALVAFAFSSFMGGSKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFD
CVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKFFYCTDESKELEKDCRGQYLDYEKSE
VEAQPRQWKKYEFHYDNVLWALLTLFTVSTGEGWPTVLKHSVDATYEEQGPSPGYRMEMS
IFYVVYFVVFPFFFVNIFVALIIITFQEQGDKVMSECSLEKNERACIDFAISARPLTRYM
PQNKQSFQYKMWKFVVSPPFEYFIMVMIALNTIVLMMKFYGAPDAYEEMLKCLNIVFTSM
FSMECVLKIIAFGVLNYFRDAWNIFDFVTVLGSITDILVTEIADTDNFINLSFLRLFRAA
RLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIALDDDTSIN
RHNNFRTFLQALMLLFRSATGEAWHEIMLSCLSNRACDRLSGLTKNECGSDFAYFYFVSF
IFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFIRVWAEYDPAACGRISYTDMYE
MLRHMSPPLGLGKKCPARVAYKRLVRMNMPISDPDLTVHFTSTLMALIRTALEIKLASAG
VKQYQCDAELRKEISLVWPNLSQKTLDLLVPPHKPDELTVGKVYAALMIFDFYKQNKNSR
EQVHQPPGGLCQVPSSKMLFPLLTPTKTGPVLLFHPLKATLEQTQPLVFNHAKAFLRQKS
CTSLNNGGTLPAPESGIKESVSWGTQRTQDVFYETRTPAFERGHSEEIPIERTSKQVVEM
REISPTLANGEHQPGLESQGRAASMPRLAAETQVREGGFTGNGKLTTIPDTSPMKRSIST
LTPQRPHAMHLYEYSLERMPPDQAHHHHHHRCHRRKDKKQKLLDRSPNQLADGDAGEASS
KNKKQERGRSQERKLHSSSSSEKQRFYSCDRYGSRDRSQPKSADHSRPTSPNGGLEPGPH
RQWFS
NT seq
6678 nt
NT seq
+upstream
nt +downstream
nt
atggctcggttcggagatgatctgcccacccgctatggaggcggaggtccggccggggct
ggaagagggagcagccggcaaggtggccccccacccggccaaaggatgtacaagcagtcg
atggcccagagagccaggactatggctctctacaaccccatccccgtcaaacagaattgc
ttcaccgtcaacagatccctcttcatcttcagcgaggataacgttatacgaaaatacgcc
aagagaataaccgaatggcctccatttgaatacatgattttagctacaatcatagccaat
tgcattgttttggctttggagcagcatctaccagaggatgacaagacacccatgtcagag
agattggatgatactgagccgtactttattggaatattttgttttgaagctggtataaaa
atcatcgctctggggtttgcttttcacaaaggctcttatctccgaaacggctggaacgtg
atggattttgtcgttgtcctcacagggattctagccaccgctgggactgattttgaccta
cggaccctgcgagccgttcgggtattgagacctttgaagttggtgtcaggaattccaagt
ttgcaggttgtcctcaagtccatcatgaaggccatggtgcccttactccagatcgggctg
cttctcttctttgctatagtgatgtttgccatcattggactcgagttctacatggggaag
tttcataaaacctgcttctcgaatgaaacaggtgaggaggtgggagattttccttgtgga
gaggatccccctgccaggcaatgtgagaatggaaccacatgcaggaaatactggccaggc
cccaactatggaattaccaactttgacaatattctgtttgctgtgctaactgtcttccag
tgcatcaccatggagggctggactgacatcctctacaataccaatgatgctgcaggaaat
acctggaactggatttacttcatccctctcatcatcattggctctttcttcatgctcaac
ctggtgctgggcgtgttatcaggcgagttcgccaaagagcgtgagagggtagagaaccgc
cgggccttcctgaagctccgtaggcagcagcagatcgaacgagagctgaatgggtacttg
gagtggatcttcaaggcagaggaggtgatgctggcagaagaagacaagaatgctgaagag
aagtcccctctggacgggagggccgcctccgaagggccagttcagcaaggcacagcaccg
gcggagactggcggcagcagctacaacatgttgaaaagagctacaataaagaagagcaaa
aatgacctgattcatgctgaagagggagaggaccatttcacagacatttgctccgttggg
tctccatttgcccgggccagtctgaagagcggaaagaatgagagctcctcgtatttccgg
aggaaagagaagatgttccggttcttcatccggcgcatggtgaaagcacaaagcttttac
tggatcgtcctgtgtgtcgtcaccctgaacactctgtgcgtcgccatggtgcattatgac
cagccagaggggctcaccactgctttgtattttgcagagtttgttttcctgggtctgttc
cttactgagatgtccttgaagatgtatggactggggccaagaaattacttccactcctca
ttcaactgcttcgactttggggtgatagtggggagcatttttgaagtgatttgggcagca
gtgaagcctggtacctcatttggcatcagtgtattgagggctcttcgactgctgaggatt
ttcaaagtaaccaaatactggaactccctaaggaatctggtggtctccttgctgaactcc
atgaaatccatcatcagtttgctcttcctgctcttcctgttcattgtggtgtttgctctg
ctgggaatgcagctctttggaggacagtttaattttcaagacgaaacaccgaccacaaac
tttgatacattccctgctgccatcctcactgtgttccagatactgactggcgaagactgg
aatgcagtgatgtatcatgggatagtatcacaaggtggtgtccactcaggaatgttctct
tccatttacttcatcgtcctgactttgtttggtaactacacgctcctgaatgtcttcttg
gctattgctgtcgacaatcttgcgaatgcacaagagctaaccaaggatgaagaggagatg
gaagaggctaccaatcaaaagcttgcgctccagaaggccaaggaggtagcagaagtcagt
cccatgtccgcagctaatatttccatagcagcttttgtaaagcaaactcgaggtactgta
tctcgcagctcgtcagtctccagcgtaaattcacccaaacagcagaactcctccaaatcc
aagtccgtttgggaacagaggaccagccagatccggatgcacaatttccgggccagctgt
gaggcgctgtacaatgagctcgacccggaggagcgggtgcgctatgctaccaccctccac
atccggcccgacatgaagacccatttggatcggcctctggtggtagagccaaggactgaa
gggcggaacaacgtcggtaagctaagcccggtggacgttcaggagactgagcaggccaaa
cccacctccgccgacagtgcagaagtgccacgaaagcaccaccggcatcgggataaggac
aagatgggagagcaggagaagagcgacgtggccaaggatgagaacggggagtctggcaca
aacaataaggaggaacgtcacagacaacacaggagccatagcaaagaggcagaggggggc
agcaaggaagggaaaagtgaccgcaacagaagccaggaagggggcaaaaggcatcatcgt
cggggctccgtggaagaaggggctgagaaggagtaccggcggcaccggacccaccggcac
tcagcggagcatcaagcaaaggaaggcaatgggacagcaaatggtgccagaagcgagcgg
cgttcacgtcaccgaggagggtcaaggtcagggaaccgggaaggcgatcctggcttgaaa
ggagagaatggggaagagccccacagacgacacaagatccggcacagagctctgtcgacg
tatgagtcggtggagaaggagaatggggagaaggaaggagaagctggggagaaagatctt
aagaaccatcagcccagggaagctccgtgtgaaacagaggctgggggtagcatgagtgtc
atcccagtacataccctgcccagcacctacctgcagaaagtgcctgagcaaccagaagat
gctgacaatgagaagaacgtgacacggatgactcagccaccactggacaaaaccgccact
gtgaacatccccgtcaccatcactgcacctcccggggagaccactgtcataccaatgaac
aacattgaatttgaaagtaaaacggaagagaagaaagatatggagattgacgacttgacg
aaaaatggacctaagccaatcctgccttatagctccatgtttatcttaagccctacaaac
ccaatccgacgcctgtttcattacattgtgaacatgcgctactttgagatggtcatcctc
atcgtcatagcactgagcagcatcgccctggctgctgaagaccctgttcaagctgagtct
ccgaggaacgatgcgctgaagtatctggattatatatttacgggtgtctttaccttcgag
atggtgataaagatgattgacctggggctgctgcttcatcctggctcctatttccgtgac
ctgtggaacatcttggattttattgtggtcagtggggccctggtggcatttgccttctcg
agtttcatgggaggaagcaaaggcaaagacatcaacacaatcaagtcactgcgagtcctg
cgagttctaagaccactgaagactatcaagcgtctgcccaagttaaaggctgtctttgac
tgcgtggtgaattccctgaagaacgtcctcaatatcctaattgtttacatgctcttcatg
ttcattttcgctgtcattgctgtacaactcttcaaaggcaaattcttctactgtacggat
gagtccaaggagctagaaaaagactgcaggggtcagtatctggattatgagaagagtgag
gtggaggcacagcccagacagtggaaaaagtatgagtttcactatgacaatgtgctctgg
gctctgttaacactgttcactgtctccacaggagaagggtggccaactgtattgaagcat
tcggtggatgctacctatgaggagcagggtcccagccctggttatcgaatggaaatgtcc
atcttttatgtggtgtactttgttgtcttccccttcttctttgtgaatatatttgtggcg
ttaatcatcatcaccttccaggagcaaggggataaagtcatgtcggagtgcagtctagaa
aaaaatgagagggcctgcatagacttcgccataagtgccaggccactgacccgctacatg
cctcaaaacaagcagtcttttcagtacaagatgtggaagtttgtggtgtcccctcccttt
gaatattttatcatggtcatgattgcactcaatactattgtgctgatgatgaagttctat
ggtgctccagacgcatatgaagaaatgttgaaatgcctgaatattgtatttacgtctatg
ttttcaatggaatgcgttttgaagatcattgcctttggtgtactgaattatttccgagat
gcctggaacatctttgatttcgtaacagtattgggaagtattactgatattttagtaaca
gagattgcggacacggacaacttcatcaacctcagcttcctgaggctcttcagggcagcc
agactcatcaaacttcttcgccagggttacaccatccgcattctgctctggacatttgta
cagtcttttaaggccttgccttatgtgtgtctcctcattgcgatgctcttcttcatctat
gccattattggcatgcaggtatttggaaacattgcactagatgatgatacctcaattaat
cgacacaacaacttcagaactttcttgcaagccctgatgctattgttcaggagtgccacc
ggggaagcttggcacgaaatcatgctgtcctgcctcagtaacagagcctgcgacagactc
tctggcctcaccaaaaacgaatgtggcagcgactttgcctatttttacttcgtctctttc
atcttcctttgttcctttctgatgttgaacctgtttgtggctgtaatcatggacaacttt
gagtacctgacacgagactcttccatcctaggaccccatcacctggatgagttcattcgg
gtctgggctgaatacgacccagctgcctgcgggcgcatcagttacactgatatgtatgag
atgctgagacacatgtccccacctctaggcctgggaaagaaatgccctgctcgagttgcc
tataagcgcctggtgcggatgaacatgccaatctcagacccggacttaacggtccacttc
acttccacgctgatggctttgatccggaccgctctagaaatcaaactcgcgtcagcgggt
gtgaagcagtaccagtgtgatgctgagctgaggaaagagatctctctggtttggcccaat
ctgtcccagaagacattggacttgttggtgccgccccataaacctgacgaactgactgtg
gggaaggtctatgctgctctcatgatattcgacttctacaagcagaataaaaacagcagg
gaacaagtgcaccagccacctggaggtctttgccaggtacccagcagcaagatgctgttc
cctcttctcactcccaccaagactggaccagtgttgttgttccaccccttgaaagcaacc
ctggagcaaacccagcctctggtgttcaaccacgctaaggcattcctccgccagaaaagt
tgcacctcgctcaacaatgggggcacattgccagccccagagagcgggatcaaggagtct
gtttcatgggggactcagcgcactcaggatgtgttttacgaaaccaggacaccagctttt
gaacgaggccactcggaagaaattcccattgaacggacaagcaaacaggttgtagaaatg
agagaaatcagccccaccctggccaacggagaacaccagcctggcctggagagccagggg
cgggcggcttccatgccgcgtctggccgctgaaactcaggtgagggagggaggctttact
ggcaatggaaaacttacaaccatcccagacaccagccccatgaagcgctccatctccaca
ctgacgccgcagcgcccgcatgccatgcacctgtacgagtattccctggagcgcatgccc
ccggaccaggctcatcaccaccatcaccatcgctgccatcgacggaaagacaagaagcag
aagttgttggacaggtcacccaaccagttggccgatggggatgccggtgaggcatcttcc
aagaataagaagcaggaacgaggcaggtcccaagagagaaagctgcattcctcctcttcc
tccgaaaaacagcgcttctactcctgcgaccgctatgggagccgggaccgttctcagccc
aaatcagctgatcacagcaggcccacctcacccaatggggggctggagccaggcccccac
agacagtggttcagttaa
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integrated database retrieval system
