Dermochelys coriacea (leatherback sea turtle): 119844170
Help
Entry
119844170 CDS
T09064
Symbol
TNC
Name
(RefSeq) tenascin isoform X1
KO
K06252
tenascin
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc04510
Focal adhesion
dcc04512
ECM-receptor interaction
dcc04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119844170 (TNC)
04518 Integrin signaling
119844170 (TNC)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119844170 (TNC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
dcc00536
]
119844170 (TNC)
Glycosaminoglycan binding proteins [BR:
dcc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119844170 (TNC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
EGF_TEN
EGF_Teneurin
Fibrinogen_C
EGF_2
EGF_Tenascin
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
Fn3_PBP1
EGF
Pur_ac_phosph_N
Fn3_Dep-1_2nd
hEGF
DUF7949
EGF_PEAR1L
NDNF
Motif
Other DBs
NCBI-GeneID:
119844170
NCBI-ProteinID:
XP_038230540
LinkDB
All DBs
Position
16:complement(8516499..8623822)
Genome browser
AA seq
2401 aa
AA seq
DB search
MGLPMQVLTCAIIALLHHHVNGGLIKRIIRQKRETGLNVTLPEDNQSVVFNHVYNINVPM
GSLCSVDLDSANEDTDLKPQVEPSKTYQEHTVNEGNQIVFTHRINIPRRACGCAAAPDIK
DLLSRLEELEGLVSSLREQCSSSAGCCPGGLTAEGQVDTTPYCSGRGNYSTEHCGCICEP
GWKGPNCSEPECLNNCNNKGRCVNGKCICDEGFTGEDCSQLTCPNDCSDQGKCINGVCLC
FEEYTGEDCSEELCPVTCSEHGKCVNGRCVCDEGFTGENCSEPLCTNNCNNRGRCVEKEC
VCNEGYTGEDCGELICPNDCYDRGRCVNGTCNCEEGFTGEDCGELTCPNNCNNNGRCNNG
LCICNEGFVGDDCSEQRCPKDCNKRGRCVNGKCVCNEGFAGAACGQVKCPKDCNNQGRCI
NGQCVCQEGFMGEDCSELRCPSDCSNRGRCVNGQCECDEGFTGEDCSQLKCPNDCHNRGR
CVNRQCVCNEGFIGEDCGELRCLNDCNNRGRCVNGQCVCEEGFVGEDCGELRCPNNCNEH
GRCINGQCVCDDGYMGEDCAELRCPNDCNNQGLCVNGLCQCDSGFTEIDCSQQRCPSDCN
NRGRCINGQCLCDEGFRGVDCGERSCPNNCNDMGRCVDGQCICDDGYEGDDCSNVSSPSD
LTVTDVTDKTVNLEWKNENLVNEYLITYIPTSVGGLELQFRVPGNKTSATIRELEPGVEY
FIRVFAILENKKSIPISARVATYLPAPEGLTFKSIRETSVQVEWDPLNISFDGWELIFRN
MKKEDNGDITNSLKRADTSYMQPGLAPGQQYNVSLHVVKNKTRGPGLFRVFTTKLDSPSQ
IEARDVTDTTALITWFKPLAEIDDMELTYGPKDVPGDRTTIDLSEDESQYSIENLKPHTE
YELMLISRRGDMVSDPVKEIFVTDLDAPKNLKRLSQTDSSITLEWKNSQASIDNYRIKFA
PISGGDHAEITVPRSNQATTKATLTGLRPGIEYGIGVTAVKQDRESTPATMNAATDLDNP
KDLEVTDNTETTLSLRWRRPLAKFDRYSLTYIIPSGRKNEIEIPADSTSYLLRGLEAGTE
YTITLVAEKGRHKSKPTMVKESTATHSLDLKWETTPGPDEYSGSWSSEASGMGEDTLRDV
VVSNVTAHGFSLSWKADSGAYTSFVVEYKEVAAGPLAEVFMPGDYLGTVIDGLQANTSYK
IKVYGMIGGQRSHPLEAVATTAHLVTASGESDSETTLNPTSPAPTELSYLTNPSTDSHTL
LSVPTDFSTLEATAQLHDLKITGRTFNSFTVSWAAQDVLFDQFFITLKSLPSLNRTQEIF
VPGNLRETEFINLTAGTQYLINLRGSTQGQLSQSLDALAATEEEPELGKLAVPKVSWDGF
QLNWTAAEGAYETFVIQVQEPNNPEEARNLTVSGSLRFVNVTGLKANMPYTVTLYGVIQG
YRTKPLSVNTTTAAEPEVGELTVSNITPESFNLSWTATDEAFKTFTIEIIDSSRLQEPME
YNISGNLRTAHISGLSPKTDFIVYLSGSMRGFRTKAISAAATTVDEPLLSKLTVSNATSD
SVSLTWEAQDAAFDRFVLEVINSDLPLDSLVHTVPGASRSFVITNLRAATNYTVQLHGLV
DGQGAQTLTALVTTEAKPQLGTLTLTNVTPDSFNLSWTARDGPFAKFVINVRDSYATHAP
QELTVSGGARSAHISGLADYTGYDINIQGTTNAGVHTEPLTAFVMTESMPPLENLTVSDI
NPYGFTVSWMASENAFDNFLVIVVDSGKLLDPQEFLLTGAQRQLELKGLITGIGYEVMLY
GFAKGRQTKPLSTMAVTEAEPEVDNLLVSDATPDGFRLSWTADDGVFDSFVLKIRDTDRQ
SDPRELIVPGHERTQDITGLKEGTKYDIELYGLISGRRSQPINAVATTAVGSPKGLKFSD
ITENSATVSWTPPRTQVESFRISYIPITGGTPNVVTVDGTKTRTKLVKLIPGVDYTVSII
SIKGFEESEPISGILTTALDSPSGLVAVNITDSEALAIWQPVIATVDNYVISYIAEDDPE
VTQTVSGNTVEYDLNGLHPATEYMLRIYAVKGPQKSETVFTKFTTGMDAPRDLSAIEVQS
ETAVLSWRPPRASVTGYLLIYESIDGKVKEVILGPEATSYSLSELSPSTQYTVKLQALNR
ALKSKIIQTIFTTTGLLYPYPRDCSQALLNGESTSGLYTIYMNGNKSQSVEVYCDMISDG
GGWIVFLRRHNGKEDFYRNWRTYAAGFGDPKDEFWIGLETLHKITSQGQYELRVDLRDKG
ETAYALYDRFSVGDSKTRYRLKVDGYNGTAGDSMTYHSGRSFSTFDKDNDAAITNCALSY
KGAFWYKNCHRVNLMGRYGDNSHSQGVNWFHWKGHEYSIQFAEMKLRPISFRNLEGRRKR
A
NT seq
7206 nt
NT seq
+upstream
nt +downstream
nt
atggggcttcctatgcaggttttgacctgtgccatcatagctttgctacaccaccatgtc
aacggtgggctcatcaagagaattatccggcagaagcgggagaccgggttaaacgtgacc
ttgccagaggataaccagtctgtggtctttaaccatgtctacaacattaacgtacccatg
ggctccctctgctctgtggacttggactcagctaatgaggacacagacctgaagccccag
gttgagccaagcaagacctaccaggagcacacagtgaatgaggggaaccagattgtcttc
acacaccgcatcaacatcccccgccgggcttgtggctgtgcagctgcccctgacatcaag
gatctgctgagcagactggaagagctggaggggctggtatcctctctacgagagcagtgc
tccagcagcgctggctgctgccccggcggcctaacagcagagggacaagtggacaccaca
ccgtattgcagtggacgagggaactacagcactgagcactgtggctgcatttgtgaacct
ggctggaaaggacccaactgctcagaaccagaatgcctgaacaattgcaacaacaaaggc
cgctgtgtcaatgggaaatgtatctgtgatgagggcttcactggggaggactgcagccag
ctcacctgccccaatgactgcagtgaccaaggcaaatgcatcaatggtgtctgtctgtgc
tttgaggagtacaccggtgaggactgcagtgaagagctttgcccggtgacatgtagtgag
catggaaagtgtgtgaacggtcggtgtgtgtgtgatgaaggcttcaccggtgagaactgc
agtgagccgctctgcacgaacaactgcaataaccgtgggcgctgcgtggagaaagagtgt
gtgtgcaacgaaggctacacaggtgaagactgcggcgagcttatctgccccaatgactgc
tacgaccgtggccgctgtgtcaacgggacctgcaactgtgaggagggctttaccggggaa
gactgcggggagcttacctgccccaacaactgcaacaacaatggccgctgcaataatggg
ctgtgtatctgcaatgagggctttgtgggcgacgactgtagcgagcagcggtgccccaag
gactgcaacaagcgggggcgctgtgtcaatgggaagtgcgtgtgcaacgagggctttgct
ggggccgcctgtggccaagtgaagtgccccaaagattgtaacaaccagggccgctgcatc
aatgggcagtgtgtgtgccaggagggcttcatgggcgaagactgcagtgagttgcggtgt
cctagtgactgtagcaaccggggccgctgtgtcaatgggcagtgcgagtgtgacgagggc
ttcacgggtgaggattgcagccagctgaagtgccccaatgattgtcacaaccgcgggcgt
tgcgtcaacaggcagtgtgtgtgtaatgagggcttcattggcgaggattgtggagagctg
aggtgcctcaacgactgtaacaaccgggggcgctgcgtcaacgggcagtgtgtgtgtgaa
gagggctttgtgggcgaggactgcggagagctgaggtgtcccaacaactgtaatgagcac
gggcgctgcatcaatgggcagtgtgtgtgcgacgatgggtacatgggggaggactgtgct
gagctgaggtgtcccaatgactgcaacaaccaggggctctgcgtcaacgggctgtgccag
tgtgacagtgggttcacggagatcgactgtagccaacagcggtgtcccagtgactgcaac
aaccgggggcgctgcatcaacggacagtgcctgtgcgacgagggctttcgaggagtggac
tgcggtgagcgatcctgccccaacaactgcaatgacatgggccgctgcgttgatggacaa
tgcatttgtgatgatggatacgaaggggatgactgctccaatgtgtcctctccaagcgac
ttgacagtgacagatgtgacagataagaccgtcaatctggaatggaagaatgagaatcta
gtcaatgagtatctcatcacctatattcctaccagtgttggtggcctagaactgcagttc
agggtgcctggaaacaagacatctgctaccatccgtgaactggaacctggtgtggaatac
tttatccgtgtatttgccatcctagagaacaagaagagtattccaatcagtgccagggtg
gcaacctatctgcctgctcctgaaggtctgacattcaaatccatcagggagacatctgtg
caggtggagtgggatcctctgaacatttcatttgacggctgggagctcatcttccgaaat
atgaaaaaggaagataatggggacataaccaacagtttgaagagagcagacacatcatat
atgcagccaggtctggcaccaggacaacagtataacgtgtccctgcatgtagtgaaaaac
aaaaccagaggacctgggttgtttagagtgtttaccacaaagcttgatagcccgagccag
attgaggcaagagatgtgacagacaccacagctttaatcacatggttcaaacctttggct
gaaattgatgacatggagctcacctatggaccaaaggatgttccaggggacaggacgacc
atcgacctctctgaggatgaaagccagtactccattgagaatctgaagccacacacagag
tatgagctgatgctgatctctcggcgcggggacatggtcagcgaccctgtgaaggaaatc
tttgtcacagacttggacgcaccgaagaacctgaagcgcctgtctcagacagacagcagt
atcaccttggagtggaagaacagccaagccagcatcgataactacagaatcaagttcgct
cccatctcaggtggagaccatgctgagataactgtaccaaggagtaaccaggccacaacc
aaggctacactcacaggtctgaggcctggaattgaatatggcattggagtgacagcagtg
aagcaggacagagaaagtactcccgctactatgaatgctgcaaccgatctggataacccc
aaggacttggaggtcactgataacactgaaacgaccctctccctccgctggagaagacca
ctggccaagtttgaccgctacagcctcacttacattatcccctctgggaggaagaatgaa
attgagataccagcagatagcacctcttacctcttgcgagggctggaggctggtacagaa
tataccatcaccctagtggcagagaaaggcaggcacaagagcaaacccacaatggtgaag
gagtctactgccacacatagtctagatctaaagtgggagacaactcctggcccagatgag
tactctggatcttggagctcagaggcttctgggatgggggaggatacgctgagggatgtt
gtggtctccaatgtgacagcgcatggctttagtctctcgtggaaggcggactcaggagcc
tacactagttttgtggtggagtacaaggaagtggcagctgggccccttgcagaagtcttc
atgcctggagactacttaggcactgtgattgatggcctccaggctaacacatcctataaa
atcaaggtgtatggaatgattggaggacagcgctcccatcctcttgaagctgtggctaca
acagcacatctagtcacagcatctggagaatcagacagcgaaacaacacttaatcctacc
agcccagcacctactgagctaagttacttaacaaacccaagcactgattctcacactctg
ctttcagtacccactgatttttccaccctggaagccactgcccaacttcatgaccttaaa
ataacaggcaggactttcaatagttttacagtatcctgggcagcacaagatgtgttattt
gatcagttctttatcaccctgaaaagcctgcccagtttaaacaggactcaggaaatcttt
gtgcctggaaacctacgagaaacagaatttatcaatctcacagctggcacacaatacctg
attaatctccgtggaagcactcaaggtcagctctctcagtcactggatgctctagctgcc
acagaggaggaacctgagctcggaaagttagcagtaccgaaggttagctgggatggtttc
caactcaactggacagccgcagaaggagcctatgagacttttgtcattcaggtgcaggag
cctaacaatccagaagaagctcggaatctcacagtctcgggcagcctacgctttgtgaat
gttactggcctcaaggctaacatgccctacactgtcaccctttatggtgtgattcagggc
tacaggaccaaacccctttctgttaacaccacaacagcagcagaacccgaagttggtgaa
ctaacagtttccaacattacccccgaaagcttcaacctttcctggacagccacggatgag
gccttcaagacctttaccattgaaattattgattctagcaggttacaggagccgatggag
tacaacatttcaggcaacttaaggactgctcatatctcagggctttcccccaaaactgat
tttattgtctacctctcggggagcatgcgtggtttccgcacaaaggcaataagtgctgca
gctactacagtagacgaacctctccttagcaaactaactgtctcaaacgctacctcagac
agtgtgtccctcacatgggaagctcaggatgctgcctttgatcgctttgttttagaagtt
ataaactctgacttgcctttggattccctggtgcacacagtgccaggggcctcacggagt
tttgtaatcaccaacctaagagctgccactaattacactgtccaactgcatggtctagtt
gatggccaaggtgctcagactttgacagcactggttaccacagaggccaagccacagctg
ggcacgctcacactcacaaacgttacccccgacagcttcaacctctcatggactgcgaga
gatgggccttttgcaaagtttgttataaatgttagagattcctatgcaactcacgcaccg
caggagcttacggtgtcaggaggggcccgcagcgctcacatctcaggcctggcagattac
actggctatgatattaacattcagggcaccaccaatgcaggggtccacacagagcccctc
actgcttttgtgatgacagagtccatgcccccactggaaaacctaactgtctctgacatt
aatccttatgggttcacggtgtcctggatggcatcagagaatgcctttgacaactttcta
gtaatcgtggtggattctggcaagctgctggacccacaggagttcctccttacaggagcc
cagcggcaactggaacttaaaggccttattactggcattggctatgaggttatgctttat
ggttttgccaaggggcgccaaacaaagcccctaagcactatggctgttacagaagcagaa
cccgaggtcgacaaccttctagtttcagatgctaccccagatggcttccgtctgtcttgg
accgcagatgatggggtctttgacagctttgttcttaaaatcagggataccgacaggcag
tctgacccacgggaactaatagtgccaggccatgaacgcactcaagatataacagggctg
aaagagggtactaagtatgacattgaactctatggacttatcagtggacgacgttctcag
cccataaatgcagtagctaccacagctgtgggatcacccaagggactcaagttctctgac
attactgaaaactcagccacagtcagctggacacctccaaggacccaagtagagagcttc
cggatttcatacatccccataacaggaggtactcccaatgttgtgacagtggatggaacc
aagactaggaccaagctggtgaaactgatcccaggtgtagactacactgtcagtataatc
tccatcaaaggatttgaagaaagtgagcctatctctggaattctgactacagctctggac
agcccatcaggactggtagcggtgaatatcacagactctgaggccttggcaatctggcag
ccagtgattgccacagtggacaattatgtcatctcctacattgctgaggatgatccagaa
gttactcagacggtatctgggaacactgtggaatatgaccttaatggccttcaccctgca
actgaatatatgctgaggatctatgcagtaaagggacctcagaagagtgagacggtcttc
accaaattcactacaggcatggatgcaccaagagatttgagtgccattgaggtccagtca
gaaacagcagtactgtcatggaggcctccacgggcttctgtcaccggctatctccttatc
tacgagtctatcgatggcaaagtcaaggaagtcatcctgggacctgaggcaacttcctac
agcctgtctgagctaagcccatccacccagtacacagtgaagctgcaggcactgaacaga
gccctgaagagcaagataatccagactattttcaccacaactggacttctctatccttac
cctagagactgctcccaagctctgctgaatggagaaagtacctctggactttacaccata
tatatgaatggaaacaagtcacagtctgtagaggtgtattgtgacatgatctctgatgga
ggtggatggattgtgtttctgaggcgccacaatggaaaggaggatttctacaggaactgg
aggacttatgctgctggatttggggatcccaaggatgaattctggataggtctggagacc
ctccacaaaatcacttcccagggccagtatgagctgcgtgtggatctgcgagacaagggc
gagacagcttatgctctctatgaccggtttagcgtgggagactccaagacccgttatcgg
ctaaaagtggatggatacaatggaacggcaggtgactccatgacctatcacagtggacgg
tctttctccacctttgataaggacaatgacgctgccatcacaaactgtgctttgtcctac
aaaggtgctttctggtacaagaattgtcaccgagtcaatctgatgggcagatatggggac
aacagccacagtcagggtgttaactggttccattggaagggccatgaatactccatccag
tttgcagaaatgaagttgagacccatcagcttccggaatctagaagggagacgaaagaga
gcataa
DBGET
integrated database retrieval system
