Dermochelys coriacea (leatherback sea turtle): 119844729
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Entry
119844729 CDS
T09064
Symbol
BRIP1
Name
(RefSeq) Fanconi anemia group J protein isoform X4
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03440
Homologous recombination
dcc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119844729 (BRIP1)
03460 Fanconi anemia pathway
119844729 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dcc03400
]
119844729 (BRIP1)
Enzymes [BR:
dcc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
119844729 (BRIP1)
DNA repair and recombination proteins [BR:
dcc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
119844729 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
119844729 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
HBB
Motif
Other DBs
NCBI-GeneID:
119844729
NCBI-ProteinID:
XP_038231944
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All DBs
Position
17:5793630..5919054
Genome browser
AA seq
1281 aa
AA seq
DB search
MSLVVSEYTIGGVKIVFPCKAYPSQLAMMNAIVKGLNSRQHCLLESPTGSGKSLALLCSV
LSWQQSLHEKSLDEFSCEKECKKPETSLPCHCRCHLQVVTNDTTAVVNQGASCSFTNSKA
ATSIKSETPSTDKVMNTPVTEHNAKVTLSSKLSAKKWASLHADENDDFQVDRKRIRLLET
EQQVRKRHCFAKGVQFVDALEVYQQRRNGELTVHAEKIAAFSPKTSPDLCTQCSCSSAKE
NGKNVSYAKRKENGGKPHIPKIFFGTRTHKQIAQITRELQRTVYSSVRMTILSSRDHTCV
HPVVSRSSNRNEKCADLLEGKNGGSCVYYHGVHKLSEHHALQFARKKCQAWDIEDLVSLG
KKLRACAYFAARELMVGADIVFCPYNYLLDPQIRESMEINLKDQVVILDEAHNIEDCARE
SASYSVTETQLRFAREELDIMIVNNIRRKDHDPLRAVCYSLTNWLQESSGQLKERGYETS
CKVWSGKEMLTILHNMGITNATFPILQKHFAAVLEKEEKVSNLHGGDELIEVPIVSPATQ
IMLKGLFMVLLYLFKDDNRFADDYRVALQQTYVWTNDKQLDIPDKNVFFAQPKHQRSSRQ
KTAVHTLNFWCLNPAVAFSDLSGNVRTIVLTSGTLSPMDSFSSELGVKFTIQLEANHVIR
NSQVWVGTIGAGPKGRKLHATFQHTETFEFQDEVGALLLSVCQTVDQGVLCFLPSYKLLD
KLKDRWMHTGLWRNLELVKTVIAEPKGGDKADFDALLQLYYDAIKYKGGKDGALLIAVCR
GKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKRKYNDQHSKTRGLLPGSQWYEIQAY
RALNQALGRCIRHKKDWGALMLVDDRFRSNPNKYITGLSKWIRQQIQHHENFSTALDSLD
AFAKKNQVGASSSTQCSNESLLIHSSSKDLSPTSLWEASIHLSPDVPVESKVQNLVLEGH
PPTAINTVNSTASSQSDNSMATKKNGQNSGVENHSHQTVWREKQMDSKPKSPAIKKREKR
NSWTNADLMKQYFSNKPVTSTPLPVNEKKCISKSMCKQKRSTIESSQPVVNGCQCQSSLL
TEHTPSGPALQLETTSSSIKKDEAAATEEHPAEQQLCTSGVIDQCIELSPVRGKIELSTL
NVAIEAEAEDDSIYFTPELYDDIESEEQQIEPLIQTCNNIVNQNEHGACIVAEDLFEIST
SKAVSSTGEIKSNDNMNKELAIIVQNDKIKGNTVSDAESIARVGEVEQKIHQEMDTRKKK
SKLSRSRNKGVSSFSLSNTSP
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atgtctttggtagtgtcagaatataccattggtggggtgaagattgtctttccttgcaag
gcttacccttcacaacttgctatgatgaatgcaattgttaaggggttaaattccaggcaa
cattgtttgttggagagccccacaggaagtggtaaaagtttggcgttactttgttctgta
ttatcatggcagcagtcgctgcatgagaagtcactggatgagttctcatgtgaaaaggag
tgcaaaaaaccagagacttcattgccatgtcactgtagatgccatttgcaggttgtgact
aatgacactactgcagtcgtgaaccaaggtgcttcttgttctttcactaatagtaaagca
gcaacttccataaaaagtgaaacaccatcaacagacaaagtaatgaatactcctgttaca
gaacataatgcaaaagtcacactgtcttcaaaattatctgcaaagaaatgggcatcttta
catgcagatgaaaatgacgactttcaagtagacaggaaaaggatacgtttattagaaact
gagcagcaggtaagaaaacgtcattgttttgcaaaaggagtgcagtttgttgatgctttg
gaagtttatcagcagcgaagaaatggggaactgactgttcacgcagaaaaaattgctgct
ttctctccaaaaacatctcctgacctctgcacacagtgttcctgctcttctgcaaaagaa
aatggtaaaaatgttagttatgcaaagaggaaggaaaatggaggaaagccacacatcccc
aaaatattttttggaactcgaacacacaagcaaatagctcagattactagagagctgcag
aggacagtatattccagtgtccgtatgacaattctttctagccgggatcatacctgtgtt
catccagtggtatcgagaagtagtaacaggaatgaaaaatgtgcagacttgctggaagga
aaaaatggcgggtcctgtgtttactaccatggtgtgcataaacttagtgaacatcatgct
ctacagtttgcacgtaagaaatgtcaggcttgggacatagaagatctagttagcctggga
aagaagctacgtgcatgtgcctattttgcagctcgagaactcatggtgggggcagatatt
gtattttgtccttacaactaccttctggatccacaaataagagagagtatggagattaac
ctaaaagaccaagtagtcattttagatgaagctcataatattgaagattgtgcacgggag
tcagccagttacagtgttacagaaacacagctgagatttgctcgagaagaacttgatatc
atgatcgtcaacaatatcagacggaaggaccatgatcccctgcgggctgtgtgctacagt
ctgacgaattggctacaggaaagctctggtcaacttaaagaaaggggatatgaaacctcc
tgtaaagtttggagtggaaaggaaatgctcaccattttgcacaatatgggaataacaaat
gctacatttcctatcctgcagaaacattttgctgctgtccttgaaaaagaagaaaaagta
tcaaatcttcatggaggagatgagcttattgaggttcctattgtgagccctgccactcag
attatgctaaaagggctattcatggttctactgtatctttttaaagatgacaacagattt
gcagatgactacagagttgctttgcaacaaacatatgtttggacaaatgacaagcaactt
gatattccagataaaaatgttttctttgcacaaccaaaacatcagaggagttcacggcag
aaaacagcagtccatactcttaacttttggtgcttgaatccagctgtggccttttcagat
ttaagtggtaatgtcaggacaattgttctaacatctggtacgctctctccaatggactca
ttttcttctgaacttggtgtgaagtttactatccaacttgaggcaaatcatgttattcgt
aactctcaggtttgggttggcaccattggggcaggccccaaaggtcggaagctgcatgcc
acattccagcatacagagacctttgaattccaggatgaagtgggagcacttctgctttca
gtgtgtcaaactgttgaccaaggggtcttatgctttttgccatcttataagttgctggat
aaattaaaagatcgctggatgcacactggtttatggagaaacttggagctggttaagaca
gtcattgcagagcctaaaggaggagacaaggctgactttgatgcactgctccaattatac
tatgatgcaataaaatataaaggaggaaaagatggagcacttctgatagcagtatgcaga
ggtaaagttagtgaaggcttggatttctctgatgacaatgcccgtgctgttataactatt
ggtattccatttccaaatgtgaaagaccttcaggttgagttaaagaggaaatacaatgac
cagcactcaaagacaagaggccttttaccaggtagccaatggtatgaaattcaagcttat
agagctctcaaccaggcactgggcaggtgtattcgtcacaaaaaggattggggtgctctt
atgttagttgatgaccgcttcaggagtaaccctaataaatacataactggattatccaaa
tggattcgtcaacaaatccagcaccatgagaactttagtactgcacttgattcgttggat
gcatttgctaaaaaaaatcaagtgggtgctagttcttcaacccagtgtagtaatgaatct
ctgctcatacattcaagttcaaaagatctgtcaccaacttcgttatgggaggcatctatt
catctatcaccagatgttcctgttgaaagtaaggtgcagaatttggtcctggaaggtcat
ccacccacagcaatcaacacagttaattctacagcatccagtcaatcagataacagcatg
gcaacaaagaaaaatggtcagaattctggtgtagaaaatcattctcaccaaacagtgtgg
agagaaaaacagatggattccaaaccaaaaagtcctgccatcaaaaaaagagagaaaagg
aatagttggactaatgctgatcttatgaaacagtacttcagcaataaaccagtgacttca
acacctctgcctgtgaatgaaaagaaatgcatctccaaatccatgtgcaaacaaaaaagg
agtactattgaatctagtcagcctgttgttaatggttgccagtgccagtcgtcattgctt
acagaacatacacctagtggaccggcattacaactggaaacaactagttcctcaataaaa
aaggatgaggctgcagctactgaagaacatcctgctgaacagcaactctgcactagtgga
gtcatagatcaatgcattgagttatctccagtaagaggaaaaattgaactttcaacgtta
aatgtagccatagaagcagaagctgaggatgacagtatctattttacacctgaactttat
gatgatatagaatcagaggaacagcaaattgaaccattaattcagacttgtaataatatt
gtgaatcagaatgaacatggagcttgcattgtagctgaagatctttttgaaatcagtact
tcaaaagcagtaagctcaactggagaaataaaaagtaatgataacatgaacaaagagtta
gctataatagtgcaaaatgacaagattaagggtaatacagttagtgatgctgaaagtatt
gctagagtaggagaagtggaacagaaaatacatcaggaaatggacaccagaaaaaagaaa
agtaaactttccagatcacgaaacaaaggtgtgtcttccttctcattgagcaatactagt
ccatag
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