Dermochelys coriacea (leatherback sea turtle): 119844858
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Entry
119844858 CDS
T09064
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03030
DNA replication
dcc03420
Nucleotide excision repair
dcc03430
Mismatch repair
dcc03440
Homologous recombination
dcc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119844858 (RPA1)
03420 Nucleotide excision repair
119844858 (RPA1)
03430 Mismatch repair
119844858 (RPA1)
03440 Homologous recombination
119844858 (RPA1)
03460 Fanconi anemia pathway
119844858 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dcc03000
]
119844858 (RPA1)
03032 DNA replication proteins [BR:
dcc03032
]
119844858 (RPA1)
03400 DNA repair and recombination proteins [BR:
dcc03400
]
119844858 (RPA1)
Transcription factors [BR:
dcc03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
119844858 (RPA1)
DNA replication proteins [BR:
dcc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
119844858 (RPA1)
DNA repair and recombination proteins [BR:
dcc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
119844858 (RPA1)
MMR (mismatch excision repair)
119844858 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
119844858 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CATSPERD-E_C
Motif
Other DBs
NCBI-GeneID:
119844858
NCBI-ProteinID:
XP_038232190
LinkDB
All DBs
Position
17:670624..716368
Genome browser
AA seq
616 aa
AA seq
DB search
MSARLSEGAIAAIMQGENNLKPVLQVINIRAIATGNGPPRYRVLMSDGVNTLSSFMLATQ
LNSLIEEERLSAHCICQVNRYIVNSLKDGRRVIILMDLDVLKTADVVGANIGNPIPYNEG
QGHQQQRSSAPAASPTQSKPQQQNGNSAVGPSTTKYHGPSKQLGKAGGTSFLSTPGGSQS
KVVPIASLNPYQSKWTICARVTQKGQVRTWSNSRGEGKLFSMELVDESGEIRATAFNDQV
DKFFPLIELNKVYYFTKGHLKTANKQYTAVKNDYEITFHNETSVVPCEDAQHLPSVQFEF
VPISDLENTCKDSIIDVIGVCKSYEDSTKITVKSNNREVSKRNVHLMDTSGKMVTATLWG
DEAERFDGSRQPVVAIKGARVSDFGGRSLSVLASSTVVVNPDSPEAFKLRGWFDSEGQLL
ECTSISDLRGGPTTGGSTNWKTLHEAKSENLGQGDKADYFSCVGTVVFLRKENCMYQACP
SQDCNKKVIDQQNGLYRCEKCDREFPNFKYRMILSVNIADCQENQWVTCFQESAEVILGQ
NAAFLGELKEKNEQAFEEVFQNANFSSYEFRIRVKLETYNDESRIKATVLDVKPVNHKEY
SKRLIMNIRKNAVQLG
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgcggctgagcgagggggccatcgcggccataatgcagggagaaaataattta
aagcctgtcctccaagtcattaacatccgtgccatcgccacaggaaatgggccacctcgt
taccgtgtgctgatgagtgatggggtgaacacgctttcctctttcatgttggctacacag
ctgaactctctaattgaagaggagcgcttgtctgcccactgtatctgccaggttaacaga
tacattgttaacagcctgaaagatggaaggagagtgattatattgatggatttagatgtt
ctgaaaacagctgatgtggttggtgcaaatattggcaatccaataccatacaatgaagga
caggggcaccagcagcaacgttcctcagctccagcagccagcccaacacaaagcaaacca
cagcagcagaatggaaattctgcagtaggccccagtactactaagtaccatggcccctca
aagcagcttggtaaagcaggtggtactagcttcttgagcacccctggtggatcacagtcc
aaagtggtaccaattgccagtctgaacccataccaatccaaatggaccatttgtgctcgt
gttacccagaaaggccaggttcgcacatggagcaactcccgtggtgaaggaaagctgttc
tctatggagctggttgatgaaagtggtgaaattagagctactgctttcaatgatcaagtg
gacaagttctttcccctcattgaattgaacaaggtgtattacttcaccaaaggccatctg
aagacagctaacaagcagtacacagctgtgaaaaatgactatgaaatcacattccataat
gagacttctgttgtaccctgtgaggatgctcagcaccttccttcagttcagttcgagttt
gtgcccatctctgacttggagaacacatgcaaagattcaattatcgacgtaattggagtc
tgtaagagctatgaagacagcactaaaattacagtgaaatctaacaatagagaggtgtcc
aagaggaatgtgcatttgatggatacatcggggaagatggtgacagctactctgtgggga
gatgaggctgaaagatttgatggttctagacaacctgtggtagctatcaaaggagccaga
gtctctgattttggtggccgtagtctctctgtcctggcctcaagcacagtcgtggtgaac
ccagatagtccagaagcatttaagctccgaggatggtttgactctgaagggcagcttttg
gaatgtacctcaatctctgatctgagaggtggaccaacaactgggggaagtaccaactgg
aaaactttgcatgaagctaaatctgaaaatttgggacaaggagataaggcagattatttt
agctgcgtgggcacagtggtattcctgcgtaaagagaattgcatgtaccaggcatgtccc
tctcaggactgcaataagaaagtgatagaccaacaaaatggactgtatcgctgtgagaaa
tgcgatcgcgagttccccaacttcaagtatcgcatgatactctcggtgaacattgcagac
tgtcaggagaatcagtgggtgacttgttttcaggagtcagcagaggtcattcttgggcaa
aatgctgctttcctgggagaactgaaagaaaagaatgagcaggcatttgaggaagtgttc
caaaatgccaacttcagctcatacgagttcaggatcagagtcaagttggagacttacaat
gatgaatctcgaattaaggctacagtactggatgtgaagcctgtgaaccacaaagaatac
agcaagaggctgatcatgaacatcagaaaaaacgcagtgcagctaggatga
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