Dermochelys coriacea (leatherback sea turtle): 119845210
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Entry
119845210 CDS
T09064
Symbol
CLSTN1
Name
(RefSeq) calsyntenin-1 isoform X1
KO
K22659
calsyntenin 1
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dcc04515
]
119845210 (CLSTN1)
Cell adhesion molecules [BR:
dcc04515
]
Cadherins
Cadherin related
119845210 (CLSTN1)
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Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
CDC45
Laminin_G_2
Glyco_hydro_16
EphA2_TM
SID-1_RNA_chan
V_ATPase_I
PFF1_TM
Cadherin_C_2
Piezo_TM1-24
Zip
Motif
Other DBs
NCBI-GeneID:
119845210
NCBI-ProteinID:
XP_038233098
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All DBs
Position
18:12815101..12883596
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AA seq
978 aa
AA seq
DB search
MLRPGMLCPLLTPAWLLTAGLLCAGVWAARVNKHKPWIETTYHGIVTENDNTVLLDPPLI
ALDKDAPLRFAESFEVTVTKEGEICGFKIHGQNVPFEAVVVDKSTGEGIIRSKEKLDCEL
QKDYTFTIQAYDCGKGPDGANAKKSHKATVHIQVNDVNEYAPVFKEKSYKATVIEGKRYD
NILKVEAVDADCSPQFSQICTYEIVTPDVPFAVDKDGYIKNTEKLNYGKEHQYKLTVTAY
DCGKKRAAEDVLVKISIKPTCKPGWQGWSKRIEYEPGTGSLALFPNIHLETCDEPITSIQ
ATVELETNHIGKGCDRDTYSEKSLHRLCGVSSGTAELLPPPSSTANWTVGLPTDNGHDSD
QVFEFNGTQAVKIPDGIVTVNLKEPFMISVWMRHGPGTKEKETILCNSDKTDMNRHHYSL
YVHNCRLVFLFRQDPSEGKTYKPAEFHWKLNQVCDKEWHHYVLNVEFPTVTLYVDGVSYD
PFPVTEDYPLHPSKIETQLVVGACWQEYTGNENDNETVPETSAGGELHMAQFFRGNLAGL
MIRSGKLENKKVIDCLYTCKEGLDLQIADGIGKGMKINVNPSQSTLTLEGDDIDRFDKAM
QHISYLNSRQFPTPGIRRLKITSNVKCFNEKACIAIPFVDGYIMVLQPEEPKISLSGINH
FARSASEFECPEGVSLFPELRIISTITREVEPEGDGDEDPTVQESLVSEEIMHNLDTCEV
TVLGEELNQEQESLEVDMTQLQQKGIEMSSSNLGMIITGVDTMASYEEVLHLIRYRNWHT
VSLFDRKFKLVCSELNGRYVSNEFKVEVNVIHTANPVDHANHIAMQPQFVHPVHHTFVDL
SGHNLANPHPFSVVPSTATVVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQDTGKENEMD
WDDSALTITVNPMETYEDQHSSEEEEEEEEESEDGEEEDDITSAESESSEEEEGEQEEDQ
QNVNRQQQLEWDDSTLSY
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgccccgggatgctctgccccctcctgacgcccgcctggctcctgaccgctggg
ctgctctgcgctggggtctgggctgctagagttaacaagcataagccatggattgaaacg
acttatcatggtatagttacagaaaatgacaacacagtactcctggatccccccttgata
gctctggataaagatgcacctctgcggtttgcagagagttttgaggtgacagtcaccaaa
gaaggtgagatttgtggatttaaaattcatgggcaaaatgtcccctttgaagctgtggta
gtggataaatccactggtgagggaataatacgctctaaagagaaacttgattgtgaacta
cagaaggactacacattcaccatccaggcctatgattgtggaaaaggaccagatggagct
aatgcaaaaaaatcccacaaagcaacagtacatattcaggtgaatgatgttaatgagtat
gctccagtgtttaaagagaagtcctacaaagcaacagttattgaggggaagaggtatgac
aacatcctgaaagtagaagctgtggatgcagattgttctccccagttcagccagatatgc
acctatgaaattgtaactccagatgttccctttgctgttgacaaagatggttatataaaa
aatacagaaaagttaaactatggcaaggagcaccaatataagcttacagtgactgcatat
gactgtgggaagaaaagagctgctgaggatgtattggtgaagattagcattaagcctaca
tgcaagcctggctggcaaggctggagcaaaagaatagaatatgagcctgggactggttct
ctggctctattccctaatatacatttggagacctgtgatgaacccataacttctatacaa
gcaacagttgaactagagactaatcatattgggaaaggttgtgacagagatacttactct
gagaaatcccttcacagactctgtggtgtttcctctggcacagctgagctgcttccccct
ccaagtagcactgctaactggacagtaggacttcctactgataatggtcatgacagtgac
caagtctttgaatttaatggcactcaagctgtgaagattccagatggcattgtcacagtc
aatctaaaagagccctttatgatttcggtgtggatgaggcatgggcctggtaccaaggag
aaggagacaatactctgcaattcagacaaaacagatatgaaccggcaccactactctctt
tatgtacacaattgccgacttgttttcctcttccgccaagatccttcagagggaaaaact
tacaaacctgcggaattccactggaaactgaaccaggtgtgtgacaaggaatggcatcat
tatgtcctcaatgttgaatttccaacagtgacactctatgtagatggagtttcatatgat
cctttcccagtgactgaggattacccattacatccttccaagatagaaactcagctggta
gttggagcatgttggcaagaatatacaggaaatgaaaatgacaatgaaactgtgcctgaa
acatctgcaggtggcgaactccacatggctcagtttttccgaggcaatctggccggatta
atgatccggtctggtaaactggagaacaagaaggtgatagactgcctctatacctgcaag
gaaggattagatttgcaaattgcggatggcattggcaaaggcatgaagattaatgtgaat
cccagccagtcaacattgaccttggaaggggatgatattgacaggtttgacaaagccatg
cagcatatttcctacctgaattcccgccagttcccaacacctggaatccggaggctcaaa
atcaccagcaatgtcaagtgtttcaatgaaaaagcctgcattgccattccctttgtggat
gggtatataatggtcttgcagcctgaggaacccaagatcagcttgagtggcatcaaccat
tttgcccgttctgcctcagagtttgagtgtccagagggagtttctctcttccctgagctt
cgcataatcagcacaatcactcgggaggtggaaccagagggagatggagatgaggatcct
acagtccaagaatctttggtatcagaggaaatcatgcacaacttggatacatgtgaggtc
acagtgctaggagaggagctaaatcaggagcaggaaagcctcgaggttgacatgacacag
ttacaacagaagggcattgagatgagcagctccaaccttggcatgatcatcacaggtgtt
gatactatggccagctatgaggaggttttgcacttgatacgctacagaaactggcacaca
gtctccttgtttgaccgaaagttcaagttggtctgttctgaacttaatggtcgctatgtc
agcaatgaatttaaagtggaggtgaatgttatccatacagctaacccagttgaccatgca
aatcatatagctatgcaaccacagtttgttcatccagtgcatcatacatttgttgacctc
tctggtcacaacctagctaaccctcaccccttttcagttgttccaagtactgctactgtt
gtcattgttgtgtgtgtcagtttcctggttttcatgattattctgggtgtgttccgaatc
cgagctgcacatcagagaacaatgcgtgaccaggatactggaaaggaaaatgagatggat
tgggatgactctgccttgaccattactgtgaatcctatggagacatacgaggaccagcac
agcagtgaggaggaggaggaggaggaggaagaaagtgaagatggagaggaagaagatgat
atcactagtgcagagtctgaaagcagtgaggaggaggaaggggagcaggaagaggaccaa
cagaatgttaacagacagcaacagctggaatgggatgactctacgctcagctattga
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