Dermochelys coriacea (leatherback sea turtle): 119845369
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Entry
119845369 CDS
T09064
Symbol
HDAC1
Name
(RefSeq) histone deacetylase 1 isoform X1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03082
ATP-dependent chromatin remodeling
dcc03083
Polycomb repressive complex
dcc04110
Cell cycle
dcc04330
Notch signaling pathway
dcc04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119845369 (HDAC1)
03083 Polycomb repressive complex
119845369 (HDAC1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
119845369 (HDAC1)
04350 TGF-beta signaling pathway
119845369 (HDAC1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
119845369 (HDAC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dcc03036
]
119845369 (HDAC1)
Enzymes [BR:
dcc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
119845369 (HDAC1)
Chromosome and associated proteins [BR:
dcc03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
119845369 (HDAC1)
HDAC complexes
Sin3A-HDAC complex
119845369 (HDAC1)
BRAF-HDAC complex
119845369 (HDAC1)
REST complex
119845369 (HDAC1)
SHIP complex
119845369 (HDAC1)
MiDAC complex
119845369 (HDAC1)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
119845369 (HDAC1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
119845369 (HDAC1)
Chromatin remodeling factors
NuRD complex
119845369 (HDAC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
119845369
NCBI-ProteinID:
XP_038233512
LinkDB
All DBs
Position
19:complement(6717269..6741059)
Genome browser
AA seq
480 aa
AA seq
DB search
MALTQGTKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAN
AEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVAS
AVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTASFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPVISKVMETFQPSAVALQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGG
GGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLPHAPGVQMQPIPEDAVQEDSGDEDEEDPDKRISMRSADKRIACDEEF
SDSEDEGEGGRKNVANFKKSKRVKAEDDKEEEEKKDEKEEEKAKEEKAEPKGVKEETKSA
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgacacaggggaccaagcggaaagtctgttactactatgacggggatgttgga
aactactattatggccagggccatccaatgaaaccccacaggatccgaatgacccacaat
ctactgctgaactatggcctttacagaaaaatggagatctatcgcccccacaaagcaaat
gcagaagaaatgaccaagtatcatagtgatgactacattaaatttctgagatctattcgc
cctgataacatgtctgagtacagcaagcagatgcagagattcaatgttggggaagattgc
ccggtttttgatgggttgtttgaattttgtcagctgtctgcaggaggctctgttgccagc
gctgtgaagctgaacaagcaacagacagatattgctgtgaattgggcaggaggccttcac
cacgctaagaaatcggaggcttctggcttctgttatgtcaacgacattgtgttagccatc
ttggagctattaaagtaccaccagagggtgctgtatattgacattgatattcaccatgga
gatggcgtggaggaagccttttacaccacagaccgtgtcatgactgcatcctttcataag
tacggagaatacttcccaggaacaggggatctgcgggatattggtgcaggcaaaggcaag
tattatgctgtcaactatcctctccgggatggaattgatgatgaatcctatgaggcaata
tttaagccggtgatatctaaagtgatggagacattccagcctagtgcagttgccttacag
tgtggatcggattctctgtcaggggacagattgggctgttttaatctgaccatcaaaggt
catgccaagtgtgtggagttcgtaaagagttttaacttgcctatgctgatgctaggaggg
ggtggctacacaatccgcaacgtggctagatgctggacttatgagactgctgtggctttg
gacacggaaattccaaatgagcttccatataatgactattttgaatactttggaccagac
tttaagctccacatcagtccttcgaacatgaccaaccagaacaccaatgagtatcttgag
aagattaagcagcggctatttgagaatctacgcatgctccctcatgcccctggtgtccag
atgcagccaattcctgaggatgctgtgcaggaggacagcggagatgaagatgaagaggat
cctgacaaacgcatttcgatgcgctctgctgacaagagaatagcctgtgatgaagaattc
tcagactctgaagatgaaggggaaggtggtcgcaaaaatgttgccaattttaagaagtca
aagcgtgtaaaagcagaagatgataaggaggaggaggagaagaaagatgagaaagaagag
gaaaaagccaaagaggagaaagcagaacccaaaggggtaaaggaagagactaaatcggcc
taa
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