Dermochelys coriacea (leatherback sea turtle): 119845641
Help
Entry
119845641 CDS
T09064
Symbol
SCN8A
Name
(RefSeq) LOW QUALITY PROTEIN: sodium channel protein type 8 subunit alpha
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
119845641 (SCN8A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dcc04040
]
119845641 (SCN8A)
Ion channels [BR:
dcc04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
119845641 (SCN8A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
ATP-synt_B
GPHH
FraC
Lustrin_cystein
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
119845641
NCBI-ProteinID:
XP_038234082
LinkDB
All DBs
Position
20:757244..832434
Genome browser
AA seq
1854 aa
AA seq
DB search
MIIMCTILTNCVFMTFSNPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWN
WLDFSVIMMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVM
ILTVFCLSVFALIGLQLFMGNLRNKCVIWPINLNKSLLENGTRGFDWQEYTNNVSNFYTI
PGALDPLLCGNSSDAGQCPEGYTCMKAGRNPNYGYTSFDTFSWXFLALFRLMTQDFWENL
YQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQATLEEAEQKEAEFKAM
LEQLKRQQEDAQAAAMVTSAGTVSEDAVEDDGRGRVSQSSSEISKLSSKSDKERRNRRKK
RKQKELLEGEEKGDNEKVFKSESEDGMRRKAFRLPDNRLGRKFSIMNQSLLSIPGSPFLS
RHNSKSSIFSFRGRFRDPGSENEFADDEHSTVEESEGRRDSLFVPFRGRERRSSYSGYSG
YSQGSRSSRLFPSIRRNVKRNSTVDCNGVVSLIGGPASNRPMGRLLPEVKIDKAATDDSG
TTEVEIKKKPTGSLLVSMDQLNASYGRKDRTNSIMTVLTNTLVEELEESQRKCPPCWYKF
ANTFLIWECHPHWIKLKEIVNMIVMDPFVDLAITICIILNTLFMAMEHHPMTPEFQDVLT
VGNLVFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSLMELGLADVEGLSVLRSF
RLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVC
KINVECVLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMVMVIGNL
VVLNLFLALLLSSFSADNLAATDDDGEMNNLQIAVIRIKQGIAWIKVKAHEFMQAHFKQR
EADEVKPLDELYEKKVNCIANHTGADINRDIDYQKNGNGTTSGIGSSVEKYIIDEDHMSF
INNPNLTVRVPIAVGESDFENLNTEDFSSDTDPNGSKEKLDDTSSSEGSTIDIKPEVEEV
PVEAPEEYLDPDACFTEGCVQRFKCCQVSIEDGLGKSWWILRKTCFLIVEHNWFETFIIF
MILLSSGALAFEDIYIEQRKTIRTMLEYADKVFTYIFILEMLLKWCAYGFVKFFTNAWCW
LDFLIVAVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPS
IMNVLLVCLIFWLIFSIMGVNLFAGKYHYCFNETSEERFEIEIVNNRTDCEALMLPNSTE
IRWKNVKINFDNVGTGYLALLQVATFKGWMDIMYAAVDSRKQEEQPKYEDNIYMYIYFVI
FIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPR
PLNSVQGAVFDLVTQQAFDIIIMMLICFNMVTMMVETDTQSSQMSDILWWINLVFVILFT
CECVLKMFALRHYYFTIGWNIFDFVVVILSVVGMFLADLIEKYFVSPTLFRVIRLARIGR
ILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKHEAGIDDMF
NFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCDLDKEHPGSSFKGDCGNPSVGIFFF
VSYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFDPDATQFIEYC
KLADFADALEHPLRVPKPNTIELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSGELDILR
QQMEERFVASNPSKVSYEPITTTLRRKQEDVSAVVIQRAYRVRLAKRGFIFRKSASIKLE
NGGTNREKKEGTPSTASLPSYDSVTKPEKEKQLRVEEGRRERAKRQKDFKESKC
NT seq
5565 nt
NT seq
+upstream
nt +downstream
nt
atgatcattatgtgcactattttgaccaactgtgtattcatgacttttagtaacccacct
gaatggtcgaagaatgtggagtacacattcactggtatttatacatttgaatcacttgtg
aaaattattgcaagaggtttctgcatagatggttttactttccttcgtgatccatggaac
tggctagatttcagtgtcatcatgatggcatatgtcacagagtttgtggatcttgggaat
gtctcagcattgagaactttcagagttctccgagctttgaaaactatctctgttattcca
ggcttgaagaccattgtgggtgccctaattcagtctgtgaagaaactgtcagatgtaatg
attttgacagtgttttgcctcagtgtctttgctttaatcggcctgcagctgtttatgggc
aatttgaggaacaagtgtgtaatatggccaattaacctcaataagagcctcctagagaat
ggcaccagggggtttgactggcaagaatacaccaacaatgtctcaaacttttacacaatc
cctggagcccttgatccgttgctctgtggtaacagctcagatgcaggccagtgtccagag
ggttacacatgcatgaaagcaggaaggaatccaaactatggctacacaagctttgacact
ttcagctggngctttctagccttatttcgccttatgactcaggatttttgggaaaacttg
tatcagttaacattgcgagcagcaggaaaaacgtacatgatattctttgtcctggttatc
tttgtgggttcattttatctggtcaatctgatcttggctgtggtagccatggcttatgaa
gagcagaaccaggccacgctggaggaagcggagcaaaaggaagcagaattcaaggccatg
ttggaacagctgaaaaggcagcaggaagatgcgcaggctgctgccatggtcacttcggca
gggacggtctcagaagatgctgtggaggatgatggcagggggagggtgtctcagagctct
tctgagatttccaaactcagctctaagagtgacaaggagcggcggaacaggaggaagaaa
cggaagcagaaggagctcttggaaggagaggagaagggtgacaacgagaaggtgttcaag
tctgaatctgaggatggaatgaggagaaaggcttttaggctgccagacaacaggctggga
aggaaattttccatcatgaatcagtcccttctcagcatcccaggctcccctttcctctcc
cggcacaacagcaagagcagcatcttcagcttcagagggcgcttccgtgatccaggctca
gagaacgaatttgctgatgatgagcacagcacggtggaggagagtgaaggcaggagagac
tcccttttcgtccccttccgtggccgggaacggagaagcagctacagtggttacagtggc
tacagccagggcagccggtcctcacggctcttccccagcatccgccggaatgtgaaaagg
aacagcacagtggattgtaatggcgtggtgtcccttattggcggcccagcatctaatagg
cccatgggacgccttctgcctgaggtgaaaatagataaggcagctactgatgacagtggt
actaccgaggtggaaattaaaaagaaacctaccgggtctctcttggtctcaatggatcaa
ctgaatgcatcctatggaagaaaggatcgaaccaacagtataatgactgttttaactaat
acccttgtagaagagttggaagagtcccagaggaagtgccccccctgttggtacaaattt
gccaacaccttcctgatctgggagtgccacccacattggatcaagctgaaagagatagtg
aacatgattgtcatggatccctttgtcgacctggccattaccatctgtattatactgaac
actttgttcatggcgatggaacaccatcccatgacccctgagtttcaagatgttctgact
gtaggaaatctggttttcactggaattttcacagcagaaatgttcctgaagctcatagcc
atggacccctactattatttccaagaaggttggaacatttttgacggatttattgtctcc
ctcagtttaatggaactgggtctagcagacgtggaagggctttcagtgctgcgatctttc
cgattgctgagagtcttcaagttggcgaagtcctggcccactctgaacatgctgataaaa
atcattggcaactcagtgggtgccttgggaaacctgaccttggtgctagccatcatcgtg
ttcatctttgctgtggtgggcatgcagctctttggcaagagctacaaggaatgtgtctgc
aagatcaacgtggagtgtgtgctaccccgctggcacatgcacgatttcttccactccttc
cttattgtcttccgtgtgctgtgtggggagtggattgagactatgtgggattgtatggaa
gtggcaggacaggccatgtgcttgattgtcttcatgatggtcatggtcatcgggaattta
gtggtgctgaacctgttcttggctttgctgctgagctctttcagtgcagataacttagca
gcaacagatgatgatggggagatgaacaacctgcaaatagcagtcattcgcatcaagcag
ggaatcgcctggatcaaggtgaaagcacatgagttcatgcaggcgcatttcaagcagaga
gaggcagatgaggtcaaacccttggacgagttgtatgaaaagaaggtgaactgcatcgct
aaccacacaggggctgatatcaacagggacattgattatcaaaagaatggcaatggcacc
accagcgggattgggagcagtgtggagaaatacatcatagatgaagaccacatgtccttc
atcaataaccccaatctcaccgttcgggtacccattgctgtgggtgagtcagactttgaa
aacctcaacacagaagacttcagcagcgatacagatcccaatggcagcaaggagaaactg
gatgatactagctcttctgagggcagcaccattgatataaagccagaggtagaggaagtc
cctgtggaggcaccagaagaatatctggacccagatgcatgcttcacagaaggttgtgtg
cagcgctttaagtgctgtcaggtcagtattgaagatgggctgggcaaatcctggtggatc
ttgaggaagacctgttttctgattgtggagcacaactggttcgagactttcatcatcttc
atgatcctactgagcagtggagccctggcctttgaggatatttacatagaacagagaaag
accatccggaccatgctggagtatgcagacaaggtcttcacctacattttcattctggag
atgttgctgaagtggtgcgcttatggattcgtcaagttcttcaccaacgcctggtgctgg
ctggatttcctcattgtggctgtctctttagtcagccttgtagctaatgccctgggctac
tcggaactaggtgccataaagtcccttaggacactaagagctttgaggcctttaagagcg
ttgtcccgatttgaggggatgagggtggttgtcaacgccctggttggcgctatcccttcc
attatgaatgtgttgttggtctgccttatcttctggctgattttcagcattatgggggtt
aacctgtttgctggaaaataccattactgctttaacgagacatctgaggagcgcttcgaa
atagagatagttaacaacaggactgattgtgaagcactgatgctgcccaactccactgag
atccgatggaagaatgtgaaaattaactttgacaatgttgggacaggatacctggctctt
ctccaagttgctactttcaagggctggatggatatcatgtatgcagcggtagattccaga
aagcaagaagagcaacccaagtatgaggacaacatctacatgtacatctactttgtaatc
ttcatcatctttggctcctttttcaccctgaacttgtttattggtgtcatcattgataac
ttcaatcaacaaaagaaaaagtttggaggtcaggatatcttcatgacagaagagcaaaag
aaatactacaatgccatgaaaaaactgggctcaaagaaacctcagaaacctattccccgg
cctctgaacagcgtccaaggagctgtctttgaccttgtcactcagcaagcattcgatata
atcatcatgatgctcatctgcttcaacatggtgaccatgatggtggaaacagacacacag
agtagccagatgtcagacatcctctggtggatcaacctggtgtttgtcatcctcttcacc
tgtgagtgcgtgctgaagatgtttgctttgcggcactattatttcaccattggatggaac
atttttgacttcgtggtcgtgattctgtctgtcgtgggaatgttcctggctgatctcatt
gagaagtattttgtgtcacccactctcttccgagtcatccgactggcccgtattggccgc
atcctgcgtctgatcaaaggggccaaggggatccgcaccctgctttttgccttaatgatg
tccttgcctgccttgttcaacattggcctcttgctgttcctggtcatgtttatcttctcc
atctttggcatgtcgaacttcgcctatgtaaagcacgaggccggcatagacgacatgttc
aactttgagaccttcggcaacagcatgatctgtttgttccagatcactacctcggctggc
tgggatggcttgctgttgcctatcctgaaccggccgccggactgtgacctagataaggag
caccccgggagtagcttcaagggagattgtggtaacccttccgtggggatctttttcttc
gtcagctacatcatcatctcctttctgatcgtagtgaacatgtacatcgccatcattctg
gagaacttcagtgtagccacagaggagagtgctgacccgctgagcgaggacgactttgaa
accttctatgagatctgggagaagtttgaccctgatgccacacagttcattgagtactgc
aagctggcagactttgctgatgctttggagcacccactccgtgtccctaagcctaacact
atcgaactcatcgccatggacttgcctatggtaagcggggacaggatccactgcctggac
atcctatttgccttcaccaagcgtgtgctgggggacagtggggagctggacatcctgagg
cagcagatggaggaaaggtttgtggcgtctaacccttccaaagtgtcttacgagcccatc
acgaccacgctccggcgcaagcaggaagatgtctcggcagtggttatccaacgggcttac
agggttcgcttagcaaaacggggctttattttccggaagtctgcctctattaagctggaa
aatggaggaacaaatcgggagaaaaaagaaggcaccccatccactgcatccctcccatcc
tatgacagtgtaactaaacctgaaaaggagaaacagctgcgggtggaggaaggaagacga
gaacgagcaaaaagacaaaaagatttcaaggagtccaagtgttga
DBGET
integrated database retrieval system
