Dermochelys coriacea (leatherback sea turtle): 119845665
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Entry
119845665 CDS
T09064
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119845665 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dcc03021
]
119845665 (SMARCC2)
03036 Chromosome and associated proteins [BR:
dcc03036
]
119845665 (SMARCC2)
Transcription machinery [BR:
dcc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119845665 (SMARCC2)
Chromosome and associated proteins [BR:
dcc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
119845665 (SMARCC2)
PBAF complex
119845665 (SMARCC2)
GBAF(ncBAF) complex
119845665 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
CD99L2
Motif
Other DBs
NCBI-GeneID:
119845665
NCBI-ProteinID:
XP_038234128
LinkDB
All DBs
Position
20:complement(2341222..2362017)
Genome browser
AA seq
1293 aa
AA seq
DB search
MAVRKKDGGPNVKYYEAADTVSQFDSARLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLARPNIFLHQEIEPKLLGKLKDIIKRHQGTVIEDRNNASHVVFP
VPGNLEEEEWVRPVMKRDKQVLLHWGYFPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVTDEKSPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMETAGKDEEENSAGNKGEQAKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQGRQSDSDTKAGRKSKEIEDLVPEAVKAKPELQTSASQQMLSFPDKGKEKP
TDLQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDDPE
RIGEGGERGSFRALAREAPAISPPSDAAPGAASRKGNERRGEEPQETRAGLASGLELTLN
RLAQEESSADETRAETQPAEEKKELKEPREGAMEEEVKEKLGEAPKKEEEKGKEGNSEKE
LEKGDGDSMAEKEKEPKEGQEEVSKDLAEAESERKTKVERDIGEGNLSTAAAAALAAAAV
KAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADR
QAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPLPPGSQPIPPSGAPLAPAAHSMPVAQAP
GAPTTASLVAQPSLAQTEQIGQAVPAVPGAQHTVPAQQGQSPAGSHAQPPFPGQQPSSQM
LPGTVGVSTHPGVPGNLPAALPFGMPPSIPFSMASNVADSISINLPANTPAHPLHGNLPC
GMLAGGALAPPNLPVTVSSAMHPSMLTTNGPPLTAPTLPHVSGLASAAAQSPAIVAAMQG
SLLPNAALAPDQGPPLQTDPIAPSTATPVPPTQ
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtcaagtactacgaggccgcggacacc
gtgagccagttcgacagcgcgcggctctggctgggcaagaactacaagaagtacatccag
gcagagcctcctaccaacaagtccctctccagcctggtggtgcagctgctgcagttccag
gaggaggttttcggcaaacatgtcagcaatgcgccgctcaccaagctgccgataaaatgt
ttcttggatttcaaagcgggcggctccctgtgccacatcctcgccgcagcctataaattc
aagagtgaccaaggatggcggcgtttcgatttccagaatccttcgcggatggatcgcaac
gtggagatgttcatgaccatcgagaaatccttggtgcagaacaactgcctggcccggcct
aacatcttcctgcaccaggagatcgaacccaaactgctgggcaagctgaaggacattatc
aagcggcaccaggggacggtcatcgaggatcggaacaacgcctcccatgtcgtcttcccg
gtccccggcaacctggaggaggaagaatgggttcgacctgtcatgaagagagacaagcag
gtccttctgcactggggctacttcccggacagctacgacacctggatccccgcgagtgaa
atcgaagcttctgtcgaggatgcgccaaccccggagaagccccggaaggtccacgccaag
tggattctcgacacggacaccttcaacgagtggatgaacgaggaagactatgaggtgact
gacgagaagagccctgtctcccgcaggaagaaaatctccgccaagacgctcactgatgaa
gtgaacagccccgactcggaccggcgcgacaagaagggcgggaactacaaaaagagaaag
cgctcgccctcgccatccccgaccccagaggccaagaagaagaacgccaagaaaggcccg
tcgaccccgtacaccaagtccaagcgcgggcaccgcgaggaagagcaggaggatctgacg
aaggacatggacgagccctcccctgtccccaacgtggaggaggtcacgctgcccaaaaca
gtgaacaccaagaaggactcggagtctgcgcccgtgaaggggggcaccatgactgacctg
gacgagcaggaggatgagagcatggagaccgccggcaaggatgaggaggaaaacagtgca
gggaacaaaggggaacaggccaagaaccccgacctgcatgaggacaatgtgacggagcag
acacaccacattatcatccccagctacgccgcctggttcgactacaacagcgtccacgcc
atcgagcgcagagccctgcccgagttcttcaacggcaagaacaaatccaagacccccgaa
atatatctggcttatcgcaacttcatgatcgacacctaccggctgaatccccaggagtac
ctgacctcgaccgcctgccgccggaacctggccggggatgtctgcgccatcatgcgggtc
cacgccttcctggagcagtgggggctgattaactaccaggtggatgcggagagccggcca
acccctatgggacccccccctacatcacacttccacgtcctagctgacaccccctcgggg
ctggtgccgctgcagcccaagacaccgcagggtcgccagagtgacagtgacacaaaggcc
gggcgcaagagcaaggaaatcgaggacctggtcccggaggcggtgaaagcgaagcctgag
ctgcagacctcggcctcccagcagatgctcagcttccctgacaagggcaaggagaagccg
acggacctgcagaatttcgggctgcgcacggacatgtacaccaaaaagaacgtcccttcc
aagagcaaagctgccgccagtgccacccgggagtggacggagcaggagacactgctgctg
ctggaggccctggagatgtacaaggacgactggaacaaggtgtcggagcacgtgggcagc
cgcacccaggacgagtgtatcctccacttcctgcgcctgcccatcgaggacccctacctg
gaggactcggaggcatcgctcgggcccctggcctaccagcccatccccttcagccagtcg
ggcaaccccgtcatgagcactgtggccttcctggcttccgttgtggacccccgcgtggcc
tctgcagcagccaagtcagctctcgaggagttctccaagatgaaggaggaggtgcccacg
gcgctggtggaagctcacgtccgcaaggtggaggaggcggccaaggttacgggcaaggcc
gacccggccttcgggctggagagcagcgggatcgcggggaccacgtctgatgatccggag
agaataggtgaggggggcgagcgaggctccttccgcgccttggcccgtgaggcgcccgcc
atctcgcccccgtcggacgctgctccgggcgcggcgagtaggaagggtaatgagcgaaga
ggggaggagccacaggagaccagagctggcctggcctccggtctggagctcaccctcaat
cggctggctcaggaggagagcagcgctgacgagacgcgggccgaaactcagccggcggaa
gagaagaaggagctgaaggagccccgggaaggagccatggaggaggaagtgaaggagaaa
ctgggcgaagcacccaagaaagaggaggagaaaggcaaagagggcaacagcgagaaggag
ttggagaagggtgacggggacagcatggccgagaaggagaaggagcccaaggagggccag
gaggaggtgtccaaggacctggcggaggcagagagtgagaggaagaccaaggtggagcgc
gacatcggcgaagggaacctgtccaccgcggctgctgccgctctggctgctgctgccgtg
aaggccaagcacctggccgcagtggaggagcgtaagatcaagtccctggtggccctgctg
gtggagacccagatgaagaagctggagatcaagctgcgacactttgaggagctggagacc
atcatggaccgggagcgcgaggcactggagtaccagaggcagcagctcctggcagaccga
caggccttccacatggagcagctgaagtacgccgagatgcgcgcccggcagcagcacttc
cagcagatgcaccagcagcagcagcagcctccgcccctcccgcctggctcccagcccatc
ccgccctccggggctcccttggccccagccgcccactccatgcctgtggcccaggccccg
ggggcgccgaccacggccagccttgtggcccagcccagcctggctcaaacggaacagatc
ggccaggcggtgccggccgtgccgggggctcagcacaccgtaccggctcagcagggacag
agccctgccggctctcacgcccagcctccgttccccggccagcagccctcctctcagatg
ctccccgggacggttggagtgagcactcatcccggcgtgcccggtaatctcccggcagct
ctgcctttcggaatgcctccatccatcccatttagcatggctagtaacgtagcagactcc
atcagtattaacctccctgctaacacgcccgctcatccactgcatggcaacctcccatgc
ggcatgctggctgggggcgccctggccccgcctaacctgcccgtcaccgtgtctagcgcg
atgcaccctagcatgctgacgaccaacggaccgccgctcaccgcgcccaccttgcctcat
gtctcaggactggcctcggcagctgcccaaagcccagccattgtggcagccatgcagggc
agtctccttccaaacgccgccctggcaccagaccagggcccccctctgcagacggatccc
atcgcacccagcacggccaccccggtcccgcccacgcagtga
DBGET
integrated database retrieval system
