Dermochelys coriacea (leatherback sea turtle): 119846013
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Entry
119846013 CDS
T09064
Symbol
SMARCD1
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119846013 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dcc03021
]
119846013 (SMARCD1)
03036 Chromosome and associated proteins [BR:
dcc03036
]
119846013 (SMARCD1)
Transcription machinery [BR:
dcc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119846013 (SMARCD1)
Chromosome and associated proteins [BR:
dcc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
119846013 (SMARCD1)
PBAF complex
119846013 (SMARCD1)
GBAF(ncBAF) complex
119846013 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
DivIC
Motif
Other DBs
NCBI-GeneID:
119846013
NCBI-ProteinID:
XP_038235048
LinkDB
All DBs
Position
20:256338..268989
Genome browser
AA seq
525 aa
AA seq
DB search
MIGVRFRSRSPALCWEKMAARAGFQSVTPSGGSGGAGALGPGTPGPPVRMGPAPGQGLYR
SPLPGAAYPRPGMLPGSRMTPQGPSMGPPGYGGSPSVRPGMAQSGMDQSRKRPAPQQIQQ
VQQQAAQNRNHNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQE
ALKRPIKQKRKLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDAALSKYDATKQK
RKFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDY
QPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREYVICDKYLQQIFESQ
RMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLS
TASQQEIAALDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVV
GNPEEERRAEFYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgatcggtgtccggttccggtcccgctcccccgctttgtgctgggagaagatggcggcg
cgggcgggtttccagtcggtgactccgagcggcggcagcggaggggccggagcgctggga
ccgggcaccccagggccccccgtccgcatgggcccggctcccggccaaggcctctaccgc
tcccccctgccgggcgccgcctacccgcgccctggcatgttgccaggcagccgcatgaca
cctcagggaccctccatgggtcccccaggatatggtgggagtccctcagtccggcctgga
atggcccagtctggtatggatcagtcccgcaagaggccagctcctcagcaaatccaacag
gtccagcagcaagcagcccagaatcgtaaccacaatgctaagaaaaagaaaatggctgac
aaaattctacctcagaggattcgtgaactggtaccagagtctcaggcctacatggatctg
ttggcatttgaaaggaaacttgaccagacaatcatgaggaaacgtctggatatccaggag
gccttgaaacgacccattaagcaaaagcgaaagctgcgcatttttatctccaacaccttc
aatccagccaagtcagatgctgaagatggcgaagggactgttgcctcgtgggagctccgg
gtggaagggcggctgctcgaggacgctgctctgtccaaatacgatgctaccaaacagaaa
aggaaattctcatccttcttcaagtctctggtgatcgagctggacaaggacctgtatggc
ccagacaatcacctggttgagtggcacagaactgctactacccaggagacagatggcttc
caggtgaagagacctggggatgtgaatgtgcgctgtactgtcctcctgatgctggattat
cagcctccacagttcaaactggacccccgcctggctcgtctcttgggtattcatacccag
acgcgcccagtgattatccaggcactgtggcagtacatcaagacccacaagctacaggat
ccccatgagcgggagtatgtcatctgtgacaagtatctccagcagatatttgagtctcag
cggatgaagttctctgagattcctcaaaggctgcatgctttgctcatgcccccagaacca
atcatcattaaccatgtaatcagtgttgacccaaacgaccagaaaaaaaccgcctgctat
gacatcgatgtggaagtggatgatactcttaaaactcagatgaattctttcttgctgtcc
acagccagccagcaggaaatcgctgccctggataacaagattcatgagacaatagaaacc
attaatcagctgaagacacaacgtgaattcatgctgagctttgcccgtgacccccaaggt
ttcatcaatgactggctccagtcacagtgccgagatctaaagaccatgactgacgttgtt
gggaatccagaagaggagcgtagagctgaattctacttccagccctgggctcaggaagcc
gtgtgcagatacttctactccaaggtgcagcagagacggcaagagctggagcaagcactg
ggaatccgcaacacataa
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