Dermochelys coriacea (leatherback sea turtle): 119846014
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Entry
119846014 CDS
T09064
Symbol
COLGALT1
Name
(RefSeq) procollagen galactosyltransferase 1 isoform X1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc00310
Lysine degradation
dcc00514
Other types of O-glycan biosynthesis
dcc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
119846014 (COLGALT1)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
119846014 (COLGALT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
dcc01003
]
119846014 (COLGALT1)
Enzymes [BR:
dcc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
119846014 (COLGALT1)
Glycosyltransferases [BR:
dcc01003
]
O-Glycan biosynthesis
O-linked Gal type
119846014 (COLGALT1)
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
119846014
NCBI-ProteinID:
XP_038235050
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All DBs
Position
20:19175003..19195212
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AA seq
604 aa
AA seq
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MAPAAGLWLLLLLALGGAYFPEERWSPESPLQAPRVLIALLARNAAHSLPAVLGALERLR
HPKERTALWVATDHNTDNTTAVLREWLINVQTLYHYVEWRPMEEPRSYPDEEGLKHWSNS
RYEHVMKLRQAALKSARDMWADYILFVDADNLLTNPDTLGLLMAENKTVVAPMLDSRAAY
SNFWCGMTSQGYYKRTPAYIPIRKRDRRGCFAVPMVHSTFLVDLRKEASQDLAFYPPHPD
YTWSFDDIIVFAFACKQAEVQMFVCNKEVYGFLPVPLRAHSTMRDEVESFMHVQLEIMVK
NPPVEPSQYLSVLPKVPDKMGFDEVFMINLKHRADRRERMLRTLYEQQIDCKIIEAVDGK
AMNSSEVEAMGIQMLPGYKDPYHGRPLTKGELGCFLSHYKIWKEIVERGLQKSLVFEDDL
RFEIFFKRRLMNLMYDLEEEGLDWDLIYIGRKRMQVEHPEKSVPHVRNLVEADYSYWTLA
YVISLQGAQKLLAAEPLSKMLPVDEFLPVMFDKHPVSEYMEHFENRNLLAFSVEPLLVYP
THYTGDDGYISDTETSVVWNNERVKTDWDRAKSQKMKEQQELSKEAKNSDVLQSPLDSTA
RDEL
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggccccagccgctgggctctggctcctgctgctgcttgctctgggcggcgcctacttc
cccgaggagcggtggagcccagagtcgccgctgcaggcgccccgggtgctgatcgcgctg
ctagcccggaacgcggcgcactcgctgccggcggtgctgggggccctggagcggctgcgg
cacccgaaggagcgaacggcgctgtgggtggcaacagaccacaatactgacaacacaacg
gctgtgctacgagaatggctgataaatgtgcagaccttgtatcactatgtggagtggagg
ccgatggaggagcccaggtcctatccagatgaggaaggcctgaagcactggtcaaattct
cgctatgagcatgtgatgaagctcagacaagcagccttgaaatctgccagggacatgtgg
gctgactacatcttgtttgtggatgcagataatctcctgacaaaccctgacaccctgggc
ctgctgatggcagagaacaagactgtagtggcacccatgttggactctcgtgctgcctat
tctaacttctggtgtggaatgacctcgcagggttattacaaacgcactcctgcctacatt
cccattcgaaagcgagatcgccgtggctgctttgctgtccccatggtgcactccactttc
ctagttgacctgcggaaagaggcctcccaggaccttgccttctacccaccacacccagat
tacacctggtcttttgatgacatcattgtgtttgcatttgcctgcaagcaggcagaggtc
cagatgtttgtatgcaacaaagaggtttatggcttcctgccggtgccactgagagcccac
agcaccatgcgggatgaggtggaaagcttcatgcacgtgcagctggagattatggtgaag
aaccctccggtggaaccttcacaatacctgtccgtcctgcccaaggtccctgacaagatg
ggttttgatgaggttttcatgattaacttaaagcacagggcagatcgacgagagcgaatg
ctgcggacgctgtacgagcagcagatcgattgcaaaatcattgaggctgtggatggaaaa
gccatgaacagcagtgaggtggaagccatggggattcagatgctgccaggatataaggat
ccataccatggccgtccactcaccaaaggggagctgggctgcttcctcagtcactacaag
atctggaaggagattgtggagagagggctgcagaaatcactcgtgttcgaggatgacctg
cggtttgaaatattctttaaacgacggctaatgaatctgatgtatgacctagaagaagag
ggtctggactgggacttgatttacattgggaggaagcgaatgcaggtggagcatccagag
aagtctgtgcctcacgtgcggaacctggtggaggcagattattcctactggactctagcc
tatgtgatttcactgcagggtgcccagaagctgctggcagctgagccactctccaagatg
ttaccggtggatgaatttcttcctgtcatgtttgacaaacaccctgtctctgaatacatg
gaacattttgaaaaccggaatttgctggccttttcagtggaaccactgctggtttaccca
acacattacactggtgatgatggctacatcagcgacacagagacctctgtggtttggaat
aatgagagagtaaaaactgactgggaccgtgccaaatcccagaaaatgaaagaacagcag
gagcttagcaaggaggccaagaactcagatgtgctccaatcacctcttgacagtacagcc
cgggatgagctatga
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