Dermochelys coriacea (leatherback sea turtle): 119846887
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Entry
119846887 CDS
T09064
Symbol
TRIM28
Name
(RefSeq) transcription intermediary factor 1-beta isoform X2
KO
K08882
tripartite motif-containing protein 28 [EC:
2.3.2.27
]
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
dcc01001
]
119846887 (TRIM28)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcc04121
]
119846887 (TRIM28)
Enzymes [BR:
dcc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119846887 (TRIM28)
Protein kinases [BR:
dcc01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
119846887 (TRIM28)
Ubiquitin system [BR:
dcc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119846887 (TRIM28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
zf-RING_5
zf-RING_UBOX
PHD
zf-RING_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
119846887
NCBI-ProteinID:
XP_038237039
LinkDB
All DBs
Position
23:complement(11691693..11746385)
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AA seq
925 aa
AA seq
DB search
MSGSAASAEAGGPGGEKRPEALELLEKCGVCRERLRAEREPRLLPCLHSVCRECLRAEPA
AAADGEAANNKEGQVVDCPVCKHQCYLKDIVENYFLRDSGADAATDSKDANQCCTSCDDN
APATSYCVECSEPLCETCVEAHQRVKYTKDHTVRSTGPSKSKEGERTVYCSVHKHEPLVL
FCDTCDTLTCRDCQLNAHKDHQYQFLEDAVRNQRKMLAALVKRLGDKHANLQKSTKEVRT
SIRQVTDVQKRVQVDVKMAILQIMKELNKRGKVLVNDAQKVTEGQQEKLERQHWAMTKLQ
RHQEHILRFASWALESDNNTALLLSKKLIYFQLHRALKMIVDPVEPQGDMKFQWDLNAWT
KSAETFGTIVSERSGTLQATAPNAQIQRANATGPAAAGGGVKPVSGTPQVLAPLTNAPSM
VPNRPEAAVSQSQPPPLQPPVQPTRILTDPVVKSGAGSTYVQPMQLQLVQPRGLLQMNGQ
QQVMGQLVLLPQVNGTQGVQQVSVQSTIVSKGQLAPGALLQPIVSPNSQADCFISEGSAP
ASSAVQPMDTQEEGIGDLDSTEAHVSGMKRPRPSDGNVMRKVPRVSLERLDLDLTADSQP
PVFKVFPGNSNEDYNLIVIERGAQQAAAQAPSTTLPGAIVKEEQMEAAIDCPAEEPRDTK
PIVLPQDVLAAEGSVSRLISPSGSIGSSLDVTPGQSQEGALESANAAHCRVCRKAGSVVM
CNQCEQCYHLDCHLPVLQEIPSQEWKCLLCQELPAPGEEDGTNFSTSEDDEGPNKLSPLE
QRKCERVLLELLCHEPCRPLHRLSTATEGQDTIDLTLIRAKLQEKLSPPYSSSEEFAQDV
WRMIKQFNKLTEDKEDVQSIIGLQRFFEAKWSASFGDRKFSSALVEPIPLDEQRSESGSS
FTHRSSPAGSLGEAPAVSAGAGEEE
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggctcggcggcctcggccgaggcgggcggccccggcggggagaagcggcccgag
gcgctggagctgctggagaagtgcggcgtgtgccgcgagcggctgcgggccgagcgggag
ccccgcctgctgccctgcctccactccgtctgccgggagtgcctgcgggccgagccggcc
gccgccgccgacggggaggccgccaacaacaaagagggacaagtagtggactgccctgtg
tgcaaacaccagtgttacctcaaggacatcgtggagaactacttcctgagagacagcggg
gcggatgcagccacagacagcaaggatgccaaccagtgctgcaccagctgtgatgacaac
gcccctgctaccagctactgtgtggagtgctcagagccgctgtgtgagacgtgtgtggaa
gcccaccagagggtgaagtacaccaaggaccacacagtcagatccacaggcccttcgaag
tcaaaagagggtgagcgcacagtctactgctccgtgcacaagcatgagcccctggtgctg
ttctgtgatacctgtgacactctgacctgtcgggactgccagctcaatgcccacaaggat
caccaataccagttcttggaggatgctgtcaggaatcagcgtaagatgctggctgcgctg
gtgaagcgtctgggggacaagcacgccaacctgcagaaatccaccaaggaagtgcgcacc
tcgatccggcaggtgacggatgtgcagaagcgggtgcaggtggatgtgaagatggccatc
ctgcaaatcatgaaggagctcaacaagcggggcaaggtgctggtcaatgacgcacagaaa
gtgaccgaggggcagcaggagaagctggagcgccagcactgggccatgacaaagttgcag
cgccatcaggagcacatcctgcgtttcgcctcctgggccctggagagtgacaacaacact
gccctgctgctttccaagaaactgatctacttccagctgcatcgtgccctcaagatgatt
gtagaccctgtggaaccccagggggacatgaagttccagtgggatcttaatgcctggacc
aagagtgcggagaccttcggaacaatagtctcggagcggagcggcaccctgcaggccaca
gcccccaacgcgcagatccagcgtgctaacgccaccggcccggcggctgcaggaggaggg
gtgaaaccggtctccggcactcctcaggtactggctcctcttacgaatgccccttccatg
gtcccgaaccggcccgaggctgctgtctcccagagccagcctccgcctctgcagccgcca
gtgcagcccacccggatcctcacggaccccgtggttaagagtggtgccggcagcacctac
gtacagcccatgcagctccagttggtgcaaccccgcggtctcctacagatgaacggccag
cagcaagtcatgggccagctggtactcctgcctcaggtcaatgggactcagggcgtgcaa
caagtctcggtgcagtccaccatcgtcagcaagggacagctggccccaggagccctgctg
cagcccatagtctctcccaacagccaggcagactgcttcatcagtgagggtagcgcccca
gcatcctccgctgtgcagcccatggacacccaggaggaaggcattggagacctggacagc
actgaggcccacgtatcgggaatgaagaggcccaggccttcggacggcaatgtcatgcgc
aaggtgccgcgggtgagcctggagcggctggacctggacctgactgccgacagccagccg
cctgtcttcaaggtcttccccggcaacagtaacgaggactacaacctgatcgtcattgag
cgtggggcccagcaggctgccgcccaggcccccagcaccaccctgcccggagccatagtc
aaggaggagcagatggaggcagcaatagactgtccagcagaggagcccagagacaccaag
cccattgtcctgccccaggatgtcctggccgcagagggctccgtatcccgcctcatctcc
cccagtggcagcatcggctccagtctggatgtgacgccaggccagagccaggagggggcc
ctggagtcggccaatgctgcccactgcagagtgtgccggaaggcgggctccgttgtgatg
tgtaaccagtgtgagcagtgctaccatttggactgccacctcccggtgcttcaggagatc
cccagtcaggagtggaagtgcctgctgtgccaggaactgccggcgcctggtgaggaggac
ggcaccaacttctccacctcagaagatgacgagggccccaataaactctcccccttggag
cagaggaagtgtgagcgtgtcctgctggagctgctgtgccatgagccgtgccggcctctc
caccggctttcgaccgccactgagggtcaggacaccatcgacctgactctgatccgagcc
aagctgcaggagaagctctccccaccctacagctcctccgaggagtttgcccaggatgtc
tggcggatgatcaagcagtttaacaagctgacggaggacaaggaggatgtccagtccatc
atcgggctgcagcgcttctttgaggccaagtggagcgcctccttcggtgaccggaagttc
tcctctgcgctggtggagcccatcccgctggatgagcagcggagtgagagtggcagcagc
ttcacccatcgcagctcccctgccggctccctgggcgaggcccccgctgtctcggcaggt
gctggggaggaggagtga
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