Dermochelys coriacea (leatherback sea turtle): 119847055
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Entry
119847055 CDS
T09064
Symbol
L1CAM
Name
(RefSeq) LOW QUALITY PROTEIN: neural cell adhesion molecule L1
KO
K06550
L1 cell adhesion molecule
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
119847055 (L1CAM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dcc04515
]
119847055 (L1CAM)
04090 CD molecules [BR:
dcc04090
]
119847055 (L1CAM)
04091 Lectins [BR:
dcc04091
]
119847055 (L1CAM)
Cell adhesion molecules [BR:
dcc04515
]
Immunoglobulin superfamily
L1 family
119847055 (L1CAM)
CD molecules [BR:
dcc04090
]
Proteins
119847055 (L1CAM)
Lectins [BR:
dcc04091
]
I-type lectins (Siglecs)
119847055 (L1CAM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
Bravo_FIGEY
V-set
C2-set_2
Ig_VEGFR-1-like_5th
C2-set_3
V-set_CD47
OATP
Motif
Other DBs
NCBI-GeneID:
119847055
NCBI-ProteinID:
XP_043357253
LinkDB
All DBs
Position
23:16708547..16733065
Genome browser
AA seq
1366 aa
AA seq
DB search
MRGSPSQNWGENPGVLAPSPAPRPGRGRALGVGSDSGLCHSLCSRSGERSGSGAGARSDP
GAPSQRGRIERPQPAGRMAPTWGRLLRLWPLLLGLAQALTIPKEYEMHNLRQPPEMTEQL
VEKLVVFPSDDIVLRCEATGNPPVTFRWTKDGHWFDPRREAGVTVIEGSGTLYIVNSNAG
WYQGVYRCYASNELGTAMGPEIQVIADSTPQWPKEKVSPVEVEEGESVVLPCNPPASAMP
PKIYWLNSRIVHIAQDERVTVGQDGYLYFANVRGSDSHPDYICHAHYLGPRTIIQKEPLE
LRVRPTNSVKFRQPRLMMPPGETSSHLALRGSSLALECIAEGFPTPTVEWVRLNGRLPAE
RVALENSRKTLRIRDVVEEDDGEYQCIARNTQGTTRHSYTVTVEAAPYWAQKPHSRVYGP
GENVRLDCSVYGKPKPLVSWRINGVPWAELQPDPARTLRSGALILSQVTPNDSLVAQCEA
MNHHGRLLANAYVYVIQLPVKILTPDEQRYTVVENQTASLHCQTFGAPVPSVDWFTSSWK
RCDERAFGTTQRHLAAEPGPSARTPVPTCAWPRTTRTMSPPRLVEVKAATRIELGPQSAV
VKKSSNVTFQCLARFDETLQEHGVEWRRDGHPIQESDDSDKYTIEPGWLRISSVDYPDQG
VYSCRAHTVLDAVEESAELRVVGRPGPVSELQVSEQQEHRVKLSWTPGDDHNSPVEKFVV
EAEDGLRDPGTWRDVSTVPATSPGPGCTWPPTASFGFRPRGQSVRTGASPAPPTPLFTQP
GGPERYPKGWGEGTRPATCSSPGSIPHPGHSLFGSRSPSASAWPYGFAGPLTMAMACHPP
GRPLNKSDWNAPELSYRVQWRRLGLEERWSEETVSAPPLAGNGTPTFVPYEIKVQAVNPT
GKGPEPPTVVGYSGEDVPLVNPENVGVELFNSTSVLVSWSLPNRDKLRGHLRGFRVFYWR
LGSVGERNRRQARAQLLVLTLEGEVLQARLGGLRPWSLYRLYVVVFNGHSDGPHSEDVDF
STPEGVPSPPGSLLLERVSDTALALEWXRPPVPNGALTEYLLQYRQVNGSELGPLHEMSI
PSPSGXRELARLDPGQVRFHLRALTRAGQGEPLVQEGGTVPEPVLPTLDNISISGWGLIS
PSSPGSERHQANVEFEIQFMSKTTAEPWRTSGQANSTHGSYRLLNLRPGTSYRVQFVGRD
PSGGNVSFWESEVETDGKLLTTDQRSFATEGWFIGFICAVVLLLLVLLTLCFLKRSKGGK
YSVKDKEDTQVDSEARPMKDETFGEYRSLESEKEEKPFGSSQPSLDGAVPALGSDDSLAD
YGGSDDVQFNEDGSFIGQYSSHTGKEAASNDSSGATSPTNATAALE
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atgaggggatccccctcccagaactggggggagaacccaggagtcctggctcccagcccc
gctccccgcccagggaggggccgggctctgggggtggggtctgactccggattatgtcac
agtctctgcagccgcagtggggagcggagcggctcgggcgcaggtgcacggagcgaccca
ggcgcccccagccagcgcggccggattgagcggccccagccggcggggaggatggctccc
acgtggggccggctgctccggctctggcctctcctgctgggcctggcccaggccctcacc
atccccaaggagtatgagatgcacaacctgaggcagcccccagagatgactgagcagctc
gtggagaagctggtcgtgttccccagcgacgacattgtcctgcggtgcgaggccaccggg
aacccccctgtcacgttccgctggacgaaggatgggcactggttcgacccgcgccgggag
gccggggtgacggtcatcgagggctcagggacgctgtacatcgtcaacagcaacgcgggg
tggtaccagggcgtgtatcggtgttatgccagcaatgagctgggcacggccatgggcccc
gagatccaagtcatcgctgacagtaccccccagtggcccaaggagaaggtgtcgccggtg
gaagtggaggaaggggaatccgtggtcctgccctgcaacccccccgccagcgccatgccc
cccaaaatctactggctaaacagccggatcgtgcacatcgcgcaggacgagcgggtcacc
gtggggcaggacgggtacttgtacttcgccaacgtgcggggctcggacagtcaccccgac
tacatctgccacgcacactacctgggcccccgcaccatcatccagaaggagccactcgag
ctgcgggtccggcccaccaactcagtgaagtttcgccagccccggctcatgatgccacct
ggggagaccagctcccacctcgccctgcgggggtccagcctggccctggagtgcatcgcg
gagggcttccctacgcccactgtggagtgggtccgtctgaacggccgcctgcccgcggag
cgtgtggccctggagaactcccggaaaaccctgcggatccgggacgtggtggaggaggac
gacggggagtatcagtgtatcgcccgcaacacccagggcaccacccgtcacagctacacc
gtcaccgtggaagctgccccctactgggctcagaagccccacagccgggtgtacggcccc
ggggagaacgttcggctcgactgctccgtctacgggaaacccaaacccctggtgtcctgg
aggatcaacggcgtcccctgggcagagctgcagccagacccggcacggacgctgcgctcg
ggggccctgatcctgagccaggtgacgcccaacgactcgctggtggcgcagtgcgaggcc
atgaaccaccatggccgcctgctggccaacgcctacgtctacgtcatccagctcccagtg
aagatcctgaccccggacgagcaacgctacaccgtggtggagaaccagacggcgtctctg
cactgccagaccttcggggcgcccgtgcccagcgtggactggttcacgagcagttggaag
cgctgcgacgaacgcgccttcggcaccacacaacggcaccttgcggctgagccaggaccc
agcgccaggacaccggtgcctacgtgtgcctggcccagaacgaccagaacaatgtcacct
ccgcgcctggtcgaggtcaaagctgcgacacggatcgagctgggcccccaaagcgccgtg
gtgaagaaatccagcaacgtgaccttccagtgcctggcgcggttcgacgagacgctgcag
gaacacggggtcgagtggcggcgggacgggcaccccatccaagagtcagacgacagcgac
aagtacaccatcgagcccggctggctgcggatttccagcgtggactacccagaccagggc
gtgtacagctgccgagcccacacggtgctggacgcggtggaggaaagcgccgagctgcgg
gtggtgggccgccccgggccggtgtcggagctgcaggtgtcggagcagcaggagcaccgg
gtgaagctgagctggaccccaggggacgatcacaacagccccgttgagaagttcgtggtg
gaggcagaggacgggctccgggaccccggcacctggcgggacgtcagcaccgtcccggcc
accagccctgggcccggctgcacctggccccctacggcgagtttcggtttccgtccgcgc
ggccaatcggtacggacgggggcgagcccagcgccacctacacccctgttcacacagcca
ggcggccctgagcgctacccgaaggggtggggcgaaggaacgagaccagcaacatgctca
tcacctggaagcatcccgcaccctggccacagcctgtttggctcgcgctccccgtcagcc
tctgcctggccctacggctttgccgggcccctgaccatggctatggcgtgtcaccctccg
gggaggcccctgaacaagtcggactggaacgcccccgagctgagctaccgggtgcagtgg
aggcggctgggcctagaggagcgctggagtgaggagacagtcagcgcccccccccttgct
ggtaacggaacccccacctttgtgccctacgaaatcaaggtgcaggccgtgaaccccact
ggcaaggggcccgagccccccaccgtggtggggtactccggagaggacgtgcccctggtg
aaccccgagaacgtgggggtggaactattcaacagcaccagtgtcctcgtcagctggagc
ctgcccaacagagacaagctgcggggtcacctccgggggttcagggtgttttactggcgg
ctgggcagtgtgggggagcggaaccggcgccaggcccgggcccagctgctggtgctgacg
ctggagggggaggtgttgcaggccaggctgggggggctgcgcccctggagcttgtaccgc
ctctacgttgtcgtgtttaacgggcacagcgatgggccccacagtgaggacgttgacttc
agcacccccgagggagtgcccagcccccccggctcgctgctcctggagcgggtgtcggac
acggcgctggctctggagtggnnacgccccccggttcccaatggggcgctgaccgagtac
ctgctgcagtaccggcaggtgaacgggtcggagctgggccccctgcacgaaatgtccatc
ccgtctcccagcggannacgtgagctggcccggctggacccggggcaggtacggttccac
ctgcgggcgctgacccgggccggccagggcgagccgctggtgcaggagggtggcaccgtg
ccagagccagtgctccccactttggacaacatcagcatctcggggtggggcctgatttca
ccgtcatcacctgggtccgagcggcaccaggccaacgtggagttcgagattcagttcatg
agcaagaccacggccgagccctggcgaacttccggccaggcgaactccacccacggctcc
taccggctcctcaacctgcgacccggcacctcctaccgcgtccagttcgtggggcgcgac
ccctcagggggcaacgtctccttctgggagagcgaggtggagaccgacggcaagctgctg
acgaccgaccagcgcagctttgccaccgagggctggttcatcggcttcatctgtgctgtg
gtcctgctgctgctggtcctgctgaccctctgcttcctcaagcgcagcaagggagggaag
tactcggtgaaggacaaggaggacacgcaggtcgactctgaagctcgacccatgaaggac
gagacattcggggagtacagatccctggagagcgagaaggaggagaagccgttcggcagc
agccagccctcgctcgacggggccgtcccggcgctgggcagtgacgacagcctggccgac
tacgggggcagcgacgacgtgcagttcaacgaggacggatccttcatcggccagtacagc
agccacacgggcaaggaggcggccagcaatgacagctcgggggccaccagccccaccaat
gccacggccgccctggagtag
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