Dermochelys coriacea (leatherback sea turtle): 119847055
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Entry
119847055 CDS
T09064
Symbol
L1CAM
Name
(RefSeq) LOW QUALITY PROTEIN: neural cell adhesion molecule L1
KO
K06550
L1 cell adhesion molecule
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc04514
Cell adhesion molecule (CAM) interaction
dcc04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
119847055 (L1CAM)
04517 IgSF CAM signaling
119847055 (L1CAM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dcc04515
]
119847055 (L1CAM)
04090 CD molecules [BR:
dcc04090
]
119847055 (L1CAM)
04091 Lectins [BR:
dcc04091
]
119847055 (L1CAM)
Cell adhesion molecules [BR:
dcc04515
]
Immunoglobulin superfamily
L1 family
119847055 (L1CAM)
CD molecules [BR:
dcc04090
]
Proteins
119847055 (L1CAM)
Lectins [BR:
dcc04091
]
I-type lectins (Siglecs)
119847055 (L1CAM)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
Bravo_FIGEY
Ig_VEGFR-1-like_5th
V-set
C2-set_2
Ig_PDGFR_d4
C2-set_3
V-set_CD47
DUF8063
OATP
Motif
Other DBs
NCBI-GeneID:
119847055
NCBI-ProteinID:
XP_043357253
LinkDB
All DBs
Position
23:16708547..16733065
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AA seq
1366 aa
AA seq
DB search
MRGSPSQNWGENPGVLAPSPAPRPGRGRALGVGSDSGLCHSLCSRSGERSGSGAGARSDP
GAPSQRGRIERPQPAGRMAPTWGRLLRLWPLLLGLAQALTIPKEYEMHNLRQPPEMTEQL
VEKLVVFPSDDIVLRCEATGNPPVTFRWTKDGHWFDPRREAGVTVIEGSGTLYIVNSNAG
WYQGVYRCYASNELGTAMGPEIQVIADSTPQWPKEKVSPVEVEEGESVVLPCNPPASAMP
PKIYWLNSRIVHIAQDERVTVGQDGYLYFANVRGSDSHPDYICHAHYLGPRTIIQKEPLE
LRVRPTNSVKFRQPRLMMPPGETSSHLALRGSSLALECIAEGFPTPTVEWVRLNGRLPAE
RVALENSRKTLRIRDVVEEDDGEYQCIARNTQGTTRHSYTVTVEAAPYWAQKPHSRVYGP
GENVRLDCSVYGKPKPLVSWRINGVPWAELQPDPARTLRSGALILSQVTPNDSLVAQCEA
MNHHGRLLANAYVYVIQLPVKILTPDEQRYTVVENQTASLHCQTFGAPVPSVDWFTSSWK
RCDERAFGTTQRHLAAEPGPSARTPVPTCAWPRTTRTMSPPRLVEVKAATRIELGPQSAV
VKKSSNVTFQCLARFDETLQEHGVEWRRDGHPIQESDDSDKYTIEPGWLRISSVDYPDQG
VYSCRAHTVLDAVEESAELRVVGRPGPVSELQVSEQQEHRVKLSWTPGDDHNSPVEKFVV
EAEDGLRDPGTWRDVSTVPATSPGPGCTWPPTASFGFRPRGQSVRTGASPAPPTPLFTQP
GGPERYPKGWGEGTRPATCSSPGSIPHPGHSLFGSRSPSASAWPYGFAGPLTMAMACHPP
GRPLNKSDWNAPELSYRVQWRRLGLEERWSEETVSAPPLAGNGTPTFVPYEIKVQAVNPT
GKGPEPPTVVGYSGEDVPLVNPENVGVELFNSTSVLVSWSLPNRDKLRGHLRGFRVFYWR
LGSVGERNRRQARAQLLVLTLEGEVLQARLGGLRPWSLYRLYVVVFNGHSDGPHSEDVDF
STPEGVPSPPGSLLLERVSDTALALEWXRPPVPNGALTEYLLQYRQVNGSELGPLHEMSI
PSPSGXRELARLDPGQVRFHLRALTRAGQGEPLVQEGGTVPEPVLPTLDNISISGWGLIS
PSSPGSERHQANVEFEIQFMSKTTAEPWRTSGQANSTHGSYRLLNLRPGTSYRVQFVGRD
PSGGNVSFWESEVETDGKLLTTDQRSFATEGWFIGFICAVVLLLLVLLTLCFLKRSKGGK
YSVKDKEDTQVDSEARPMKDETFGEYRSLESEKEEKPFGSSQPSLDGAVPALGSDDSLAD
YGGSDDVQFNEDGSFIGQYSSHTGKEAASNDSSGATSPTNATAALE
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atgaggggatccccctcccagaactggggggagaacccaggagtcctggctcccagcccc
gctccccgcccagggaggggccgggctctgggggtggggtctgactccggattatgtcac
agtctctgcagccgcagtggggagcggagcggctcgggcgcaggtgcacggagcgaccca
ggcgcccccagccagcgcggccggattgagcggccccagccggcggggaggatggctccc
acgtggggccggctgctccggctctggcctctcctgctgggcctggcccaggccctcacc
atccccaaggagtatgagatgcacaacctgaggcagcccccagagatgactgagcagctc
gtggagaagctggtcgtgttccccagcgacgacattgtcctgcggtgcgaggccaccggg
aacccccctgtcacgttccgctggacgaaggatgggcactggttcgacccgcgccgggag
gccggggtgacggtcatcgagggctcagggacgctgtacatcgtcaacagcaacgcgggg
tggtaccagggcgtgtatcggtgttatgccagcaatgagctgggcacggccatgggcccc
gagatccaagtcatcgctgacagtaccccccagtggcccaaggagaaggtgtcgccggtg
gaagtggaggaaggggaatccgtggtcctgccctgcaacccccccgccagcgccatgccc
cccaaaatctactggctaaacagccggatcgtgcacatcgcgcaggacgagcgggtcacc
gtggggcaggacgggtacttgtacttcgccaacgtgcggggctcggacagtcaccccgac
tacatctgccacgcacactacctgggcccccgcaccatcatccagaaggagccactcgag
ctgcgggtccggcccaccaactcagtgaagtttcgccagccccggctcatgatgccacct
ggggagaccagctcccacctcgccctgcgggggtccagcctggccctggagtgcatcgcg
gagggcttccctacgcccactgtggagtgggtccgtctgaacggccgcctgcccgcggag
cgtgtggccctggagaactcccggaaaaccctgcggatccgggacgtggtggaggaggac
gacggggagtatcagtgtatcgcccgcaacacccagggcaccacccgtcacagctacacc
gtcaccgtggaagctgccccctactgggctcagaagccccacagccgggtgtacggcccc
ggggagaacgttcggctcgactgctccgtctacgggaaacccaaacccctggtgtcctgg
aggatcaacggcgtcccctgggcagagctgcagccagacccggcacggacgctgcgctcg
ggggccctgatcctgagccaggtgacgcccaacgactcgctggtggcgcagtgcgaggcc
atgaaccaccatggccgcctgctggccaacgcctacgtctacgtcatccagctcccagtg
aagatcctgaccccggacgagcaacgctacaccgtggtggagaaccagacggcgtctctg
cactgccagaccttcggggcgcccgtgcccagcgtggactggttcacgagcagttggaag
cgctgcgacgaacgcgccttcggcaccacacaacggcaccttgcggctgagccaggaccc
agcgccaggacaccggtgcctacgtgtgcctggcccagaacgaccagaacaatgtcacct
ccgcgcctggtcgaggtcaaagctgcgacacggatcgagctgggcccccaaagcgccgtg
gtgaagaaatccagcaacgtgaccttccagtgcctggcgcggttcgacgagacgctgcag
gaacacggggtcgagtggcggcgggacgggcaccccatccaagagtcagacgacagcgac
aagtacaccatcgagcccggctggctgcggatttccagcgtggactacccagaccagggc
gtgtacagctgccgagcccacacggtgctggacgcggtggaggaaagcgccgagctgcgg
gtggtgggccgccccgggccggtgtcggagctgcaggtgtcggagcagcaggagcaccgg
gtgaagctgagctggaccccaggggacgatcacaacagccccgttgagaagttcgtggtg
gaggcagaggacgggctccgggaccccggcacctggcgggacgtcagcaccgtcccggcc
accagccctgggcccggctgcacctggccccctacggcgagtttcggtttccgtccgcgc
ggccaatcggtacggacgggggcgagcccagcgccacctacacccctgttcacacagcca
ggcggccctgagcgctacccgaaggggtggggcgaaggaacgagaccagcaacatgctca
tcacctggaagcatcccgcaccctggccacagcctgtttggctcgcgctccccgtcagcc
tctgcctggccctacggctttgccgggcccctgaccatggctatggcgtgtcaccctccg
gggaggcccctgaacaagtcggactggaacgcccccgagctgagctaccgggtgcagtgg
aggcggctgggcctagaggagcgctggagtgaggagacagtcagcgcccccccccttgct
ggtaacggaacccccacctttgtgccctacgaaatcaaggtgcaggccgtgaaccccact
ggcaaggggcccgagccccccaccgtggtggggtactccggagaggacgtgcccctggtg
aaccccgagaacgtgggggtggaactattcaacagcaccagtgtcctcgtcagctggagc
ctgcccaacagagacaagctgcggggtcacctccgggggttcagggtgttttactggcgg
ctgggcagtgtgggggagcggaaccggcgccaggcccgggcccagctgctggtgctgacg
ctggagggggaggtgttgcaggccaggctgggggggctgcgcccctggagcttgtaccgc
ctctacgttgtcgtgtttaacgggcacagcgatgggccccacagtgaggacgttgacttc
agcacccccgagggagtgcccagcccccccggctcgctgctcctggagcgggtgtcggac
acggcgctggctctggagtggnnacgccccccggttcccaatggggcgctgaccgagtac
ctgctgcagtaccggcaggtgaacgggtcggagctgggccccctgcacgaaatgtccatc
ccgtctcccagcggannacgtgagctggcccggctggacccggggcaggtacggttccac
ctgcgggcgctgacccgggccggccagggcgagccgctggtgcaggagggtggcaccgtg
ccagagccagtgctccccactttggacaacatcagcatctcggggtggggcctgatttca
ccgtcatcacctgggtccgagcggcaccaggccaacgtggagttcgagattcagttcatg
agcaagaccacggccgagccctggcgaacttccggccaggcgaactccacccacggctcc
taccggctcctcaacctgcgacccggcacctcctaccgcgtccagttcgtggggcgcgac
ccctcagggggcaacgtctccttctgggagagcgaggtggagaccgacggcaagctgctg
acgaccgaccagcgcagctttgccaccgagggctggttcatcggcttcatctgtgctgtg
gtcctgctgctgctggtcctgctgaccctctgcttcctcaagcgcagcaagggagggaag
tactcggtgaaggacaaggaggacacgcaggtcgactctgaagctcgacccatgaaggac
gagacattcggggagtacagatccctggagagcgagaaggaggagaagccgttcggcagc
agccagccctcgctcgacggggccgtcccggcgctgggcagtgacgacagcctggccgac
tacgggggcagcgacgacgtgcagttcaacgaggacggatccttcatcggccagtacagc
agccacacgggcaaggaggcggccagcaatgacagctcgggggccaccagccccaccaat
gccacggccgccctggagtag
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