Dermochelys coriacea (leatherback sea turtle): 119847104
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Entry
119847104 CDS
T09064
Symbol
NPAS1
Name
(RefSeq) neuronal PAS domain-containing protein 1 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dcc03000
]
119847104 (NPAS1)
Transcription factors [BR:
dcc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
119847104 (NPAS1)
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GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_4
PAS_9
HLH
SIS_2
Motif
Other DBs
NCBI-GeneID:
119847104
NCBI-ProteinID:
XP_038237444
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Position
23:complement(4365266..4465133)
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AA seq
878 aa
AA seq
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MAAPFGNEVKCVSVEWDFLQGLLVKNQPVPCLQALRKEKSRNAARSRRGKENFEFYELAK
MLPLPGAITSQLDKASIVRLTISYLKMRDFASHGEPPWGLRAEGSPPPGPAGKGPGRRNM
AALLTKLFEQNLGGHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQVELTGSSVFDYI
HPGDHPEVAEQLGLKLPFDAVGSPPGSQKPPGLTVASSSSSCSSSLNEASEPDPAGSHAP
PKHDALERSFFIRMKSTLTKRGLHVKTSGYKVIHVTGRLRPRLPSYSHAHSVLSRVLGLV
ALAHTLPPSTLSEVRIECHMFVFRVNMDLQIVYCESRISDYMDLCPSELVGKSCYQFIHG
EDVEGIRQSHLDLLKKGQVVTRYYRWLQKNGGFVWIQSCATISVNIKNPSEKNMVWVNYI
LSKPECKNTALDIFQLPGIPARQTDASDASDLEPDFKESDHGPEHNQGNQFLPKVAGALA
KGYSQSTPDDGAHCSMAENDASSPEMSYKDEDVLEGAGASDAESRHRGPQNKRIKLEFQP
ESPPREASLVSTEESDSGSEEEPDLPPQPVALERRVNGYNMAAGRNAGPSQSCTSEFASV
IQTQRSYPPKASAALSIKTEQSQAPKYDKATLWTYPSARDALHEGPPYTVSKALSLEKPI
LRQATSHLYVSIPDSVLTPPEMDSSGGLAKAPFSTSPRAMLPAPSAETLSPPLSGSPCEE
RATSTPFAPLVYPGEMEALQRFHAGNVVLPLVHQLGGHHGIASTTGSQSLYTTSTIRYAP
ADVTLAVPGNVLPASHAINLMDIGSVESKTSMELMYHHIQRLNMVAPFGNSASATSLAQI
SGAAGGVFTAAESLFSTLPFSMASSGIHSLSAAERKED
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggcagccccgttcggcaatgaggtgaagtgcgttagcgtagagtgggacttcttgcaa
ggactgttggttaagaatcagccagtgccctgtctgcaggccctgcggaaggagaagtcc
cgcaatgccgcccgctcccggcgcggcaaggagaacttcgagttctacgagctggccaag
atgctgcccctacccggcgccatcaccagccagctggacaaagcctccatcgttcgcctc
accatcagttacctcaagatgcgcgactttgccagccacggcgagcccccgtgggggctg
cgggccgaagggagccccccacctggccccgctggcaaaggtcccggcaggaggaacatg
gcagctctgctgaccaagctctttgaacagaatctgggaggacacattttgcagtctctg
gacgggtttgtgtttgcactaaaccaagaggggaagtttctttacatctccgagacggtg
tctatttacctcgggctctcgcaggtggagctgacgggcagcagcgtctttgactacatc
catcctggagatcaccctgaggtcgccgagcaactggggctcaagctgcctttcgatgct
gtcggctccccaccggggagccagaaacctccaggcctcactgtggccagctcttcctcc
tcctgctcctcctccctgaacgaggcctctgagcccgatcctgctggctcccacgcgccc
cccaagcatgacgccctggaacgatccttcttcatccgtatgaaatccaccctgaccaag
agagggctgcacgtgaagacttctggctacaaggtgattcatgtcactggccgtctccgc
ccccgcctgccgtcctactcccatgcccattcggtcctcagccgagtcctggggctggtg
gccctggcccacacgttgccgccttccacgctcagcgaggtgcgcatcgagtgccacatg
tttgtgttccgggtcaacatggacctgcagatcgtgtactgcgagagcaggatcagcgat
tatatggacctatgcccctcggagctggtagggaaaagctgctaccagtttatccatggt
gaggacgtggaaggaatccggcagagccacctggacttgttgaaaaaaggccaggtcgtg
acccgatattatcgctggctgcagaagaacgggggctttgtgtggattcagtcgtgtgcc
accatctcggtcaatatcaagaaccccagcgagaagaatatggtctgggtcaattacatc
ctcagcaaacccgagtgtaagaacacggccctggacatcttccagttgcctgggattcca
gcccgacagaccgatgcctctgacgcgtccgacttggaacccgacttcaaagagagcgac
catgggccagaacacaaccaggggaaccagtttctgcccaaagtggctggggccttggcc
aaaggttactcccagagcaccccagatgatggggcccattgctccatggcggagaacgat
gccagcagcccggaaatgagctacaaggatgaggacgtgttggaaggcgctggggcgagc
gacgccgagagcaggcacagggggccccagaacaaacggatcaaactggagttccagccg
gagagccccccccgggaggcctcgctcgtcagcactgaggagtcggacagcggcagcgag
gaggagcctgatctcccaccccagccggtggcgctggagaggagggtgaacgggtacaat
atggcggcagggaggaacgcggggccgagccagtcttgcacatcggagttcgcctccgtc
atccagacccagaggagctacccaccgaaagccagcgcggcgcttagcattaagacagag
cagagccaggctcccaagtatgacaaggccaccctgtggacctacccctctgcccgggat
gccctccacgagggacccccctacactgtgagcaaagcacttagcctggagaagcccatt
ctgaggcaagccacttcccacttgtacgtctccatcccggactcagtcctcacccctcct
gagatggacagcagcggaggcctggccaaggcccccttcagcacctctccccgggctatg
ctgccggccccctcagctgaaacgctctcccccccgctctcgggctcaccgtgcgaggaa
agggccacgtcgacgcccttcgcccccctggtctatcctggcgagatggaggcgctccag
cggttccacgcggggaacgtggtcctcccgctggtgcaccagctcggcgggcaccacggc
atcgccagcaccacaggctcccagagcctctacaccaccagcactatccgatacgccccg
gccgacgtgaccctggctgtgccaggcaatgtgctgcctgcctcccatgccatcaacctc
atggacatcggcagtgtggagtccaagacctccatggaactcatgtaccaccacatccag
cggctcaacatggtggcaccgttcgggaactcagccagcgccaccagtttggcgcagatt
tcaggcgccgcggggggcgttttcacagccgccgaatccttgttctctacgctgcccttc
tccatggccagcagcggcatccacagcctgtcagccgcagagcgcaaagaggactaa
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