Dermochelys coriacea (leatherback sea turtle): 119847226
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Entry
119847226 CDS
T09064
Symbol
HCFC1
Name
(RefSeq) LOW QUALITY PROTEIN: host cell factor 1
KO
K14966
host cell factor 1
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03083
Polycomb repressive complex
dcc04980
Cobalamin transport and metabolism
dcc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
119847226 (HCFC1)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
119847226 (HCFC1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119847226 (HCFC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dcc01009
]
119847226 (HCFC1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dcc03036
]
119847226 (HCFC1)
03029 Mitochondrial biogenesis [BR:
dcc03029
]
119847226 (HCFC1)
Protein phosphatases and associated proteins [BR:
dcc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119847226 (HCFC1)
Chromosome and associated proteins [BR:
dcc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
119847226 (HCFC1)
HMT complexes
COMPASS/SET1 complex
119847226 (HCFC1)
MLL-HCF complex
119847226 (HCFC1)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
119847226 (HCFC1)
Mitochondrial biogenesis [BR:
dcc03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
119847226 (HCFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
Kelch_2
fn3
Motif
Other DBs
NCBI-GeneID:
119847226
NCBI-ProteinID:
XP_043357257
LinkDB
All DBs
Position
23:complement(16781241..16799276)
Genome browser
AA seq
1903 aa
AA seq
DB search
MAAPTAEGARRTAALLWGTARGAMAAAAPAAPGGPALLQPRWKRVVGWSGPVPRPRHGHR
AVAIKELIVVFGGGNEGIVDELHVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVF
GGMVEYGKYSSDLYELQASRWEWKRLKAKTPKNGPPPCPRLGHSFSLVGNKCYLFGGLAN
DSEDPKNNIPRYLNDLYILELRPGSGVVAWDIPITYGVLPPPRESHTAVVYTERDNKKSK
LVIYGGMSGCRLGDLWTLDIETLTWNKPSLSGVAPLPRSLHSATTIGNKMYVFGGWVPLV
MDDVKVATHEKEWKCTNTLACLNLDSMAWEPILMDTLEDNIPRARAGHCAVSINTRLYIW
SGRDGYRKAWNNQVCCKDLWYLETEKPPAPSRVQLVRANTNSLEVSWGSVPTADTYLLQL
QKYDIPAAASPAPAPVPSVPANPPKSPAPAAAAPAPPASQPLAQMGITLLPQAAAPTPTT
TIQLLPSVPGTPLPVASPARTQGVPAVLKVTGPQAPPGPPLVTVRSAGQAGKAPVTVTSL
PAGVRMVVPTQSTQGTVIGSSPQMSGMAALAAAAAATQKIPPSSAPTVLSVPAGATIVKT
VAVSPGTATLPSTVKVASAPVMVSNPATRMLKTAAAQVGTSVSSTTNAATRPIITVHKSG
TVTVAQQAQVMTTVVGGVTKTITLVKSPISVPGGSALISNLGKVMSVVQTKPVQTSAVTG
QASSGPVTQIIQTKGPLPAGTILKLVTSADGKPTTIITTTQAGGAGPKPTILGISSVSPS
TTKPGTTTIIKTIPMSAIITQSGATGVTSSPGIKSPITIITTKVMTSGTGAPAKIITAVP
KLGTAHGQQGVTQVVLKGAPGQPGTILRTVPMGGVRLVTPVTVSAVKPTVTTLVVKGTTG
VTTLGTVTGTVSTSLAGAGGHSTNASLATPITTLGTIATLSSQVINPAAITVSAAQTTMT
AASGLGTPTITMQPVSQPTQVTLITTPSGVDAQPVHDLPVSILASPTTEQPTATVTIADV
GQGDPQPGTVTLVCSNPPCETHETGTTNTATATVVANVGGLTQPVHFVCEGQEAGQPNGG
LVRVCSNPPCETHETGTTHTATTATSSMGAGRVCSNPPCETHETGTTHTATMAMSNLGAG
RVCSNPPCEMHETGTTNTATSTMGAGRVCTNPPCEMHETGTINTATTATSSMGAGRVCTN
PPCETHETGTTNTATSSVGAGRVCTNPPCEMHETGTTNTATTATCNVGMGQAEGAQHAPA
SAPCETQQTTATGTTMAASMGGAGTEPPSSAPQETGGAGPSQPQLLPTNPVPRICSNPPC
ETHETGTTHTATTVTSSMGANHDQPLGTNGQGQPEGAQGEAPPSPSSVSTVQSRAVTTVT
QSTPVPGPAIPSISSLAEPPAEEPAPPPPAEPPAPPCAEPAQPQLPEPPAEPPTPGPPPG
PPPPAPAAEPLALPQELLAEGQAGAALLVTGLTPEELAVTAAAEAAAHAAAAEQAHSLAL
QAVLQAAQQAVLGAGEPMETGEAGTGPAELGALGGEGAEGQPTAIPIVLTPQELAALVQQ
QQQLQEAQVAAVAQQPHGAPLPTEALAPADSLNDPAAESNGLSELASAVSSTVALLPAAP
SEGLAPSNTFVAPQPVVGPSPAKLQAAATLAEVANGIEPAPMKPDPSVQPQKLLVKKENQ
WFDVGVIKGTNMMVTHYFLPLNDAPPSDDDSGTVPDYTQLKKQELQPGTAYKFRVAGLNA
CGRGPFSDISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKIVEYSVYLAIQS
TQAGEPKGTAPAQLAFMRVYCGPSPSCLVQSGSLANAHIDYTTKPAIIFRIAARNEKGYG
PATQVRWLQESSKDGSMAKPASKRPLSSPDMKSAPKKPKADGQ
NT seq
5712 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccacggccgagggagcccgccgcacagcggcgctgctttgggggacagcg
agaggggccatggcagcggccgcgccggcggcccccggcggccccgcgctcctgcagccc
cgctggaagcgggtggtgggctggtcgggccccgtgccccggccccgccacggccaccgc
gccgtggccatcaaggagctgatcgtcgtcttcgggggcggcaacgaggggatcgtcgac
gagctgcacgtctacaacacagccaccaaccagtggttcatcccggcggtgcggggcgac
attccccccggctgcgctgcctacggcttcgtgtgcgacggcacccggctgctggtcttc
gggggcatggtggagtacggcaagtacagcagcgacctctacgagctgcaggccagtcgc
tgggagtggaagagactcaaggccaagacccccaagaacgggccgcccccctgcccccgc
ctgggccacagcttctctctcgtgggcaacaagtgctacctgtttggggggttggcaaat
gacagcgaggaccccaagaacaacattcccaggtacctgaatgacctgtacatcctggag
ctgcgccccggctccggcgtggtggcctgggacatccccatcacgtacggggtgctgccc
ccgccccgcgagtcccacaccgccgtggtgtacaccgagagggacaacaagaaatccaag
ctcgtcatctatgggggcatgagcggctgccgactcggcgacctctggacgctggacatc
gagaccctgacgtggaacaagcccagcctgagcggtgtggcgcccctcccccgcagcctg
cactctgccaccaccattggcaacaagatgtacgtcttcgggggctgggtgcccctcgtc
atggacgacgtcaaagtggccacgcacgagaaggagtggaagtgcaccaacacgctggcc
tgcctcaaccttgactccatggcctgggagccgatcctcatggacacgctggaggacaac
atcccgcgggcccgggcggggcactgcgccgtgtccatcaacacccgcctctacatctgg
agcgggcgcgacggctaccgcaaggcctggaataaccaggtgtgctgcaaggacctgtgg
tacctggagacggagaagcccccagcaccctcacgggtgcagctggtgcgggccaacacc
aactcgctggaagtgagctggggctcggtgcccaccgctgacacctacctgctgcagctg
cagaagtacgacatcccggcggccgcctcgcctgcccctgccccagtgccctccgtgccc
gccaacccacccaagagccccgccccagccgccgccgcgcccgcgccgcctgccagccag
cccctggcccagatgggcatcactctgctgccccaggccgctgcccccacgcccaccacc
accatccagctgctgccctctgtgcctggcacgcccctgcccgtggccagccccgcacgc
acgcagggtgtcccggccgtgctgaaggtgacggggccccaggcgcccccggggcccccc
ctggtgacagtgcgatcggccggccaggcgggcaaggccccggtgacggtgacatccctg
ccggccggcgtgcgcatggtggtgcccacacagagcacccagggcacggtgatcggcagc
agcccccagatgagcggcatggctgccctggcagccgccgctgctgccacacagaagatc
cctccctcctccgcgcccaccgtgctgagcgtgccagctggcgccaccatcgtcaagacc
gtggctgtctccccgggcaccgccacgctgcccagcacggtcaaggtggcctccgcccct
gtcatggtgagtaacccggccacccgaatgctgaagacggcagcagcccaggtgggcacc
tcggtgtcgtccacgaccaacgcggccacgcggcccatcatcacagtgcacaagtcaggc
acggttaccgtggcccagcaagcgcaggtcatgaccaccgtggtgggcggtgtcaccaag
accatcaccctggtgaagagccccatctccgtgccggggggcagcgcactgatctcgaac
ctgggcaaagtgatgtcggtcgtgcagaccaagccagtgcagacctcggccgtgaccggc
caggcctccagcggccccgtcacccagatcatccagaccaagggccccctgccggcgggc
accatcctaaaactggtgacgtcagcggacgggaagcccaccaccatcatcaccaccacg
caggcgggcggcgccggccccaagcccaccatcttgggtatcagcagcgtctcgcccagc
acaaccaagccgggcaccaccaccatcatcaaaaccatccccatgtcggccatcatcacc
cagtccggggccacaggtgtgaccagcagccctggcatcaagtcccccatcaccatcatc
accaccaaggtcatgacctcaggcacaggtgcccccgccaagatcatcacagcggtgccc
aagctgggcacagcccacgggcagcagggcgtcacgcaggtggtcctgaagggagctcct
ggccagcccggcaccatcctgcgcaccgtgcccatgggcggcgtgcggctggtcacgccc
gtcaccgtctccgctgtcaagcccactgttaccacgctggtggtgaaaggaactacgggt
gtcaccaccttgggcaccgtgacgggcaccgtctccaccagcctggctggcgcagggggc
cacagcaccaacgcctcgctggccactcccatcaccacgctgggaaccatcgccaccctg
tccagccaagtgatcaacccagccgccatcacagtctccgccgcgcagaccaccatgacg
gccgccagcgggctgggcacgcccaccatcaccatgcagcccgtctcgcagcccacgcag
gtgacgctgatcacgacgcccagcggagtggatgcccagccggtgcacgacctgccagtc
tccatcctggcctcgcccaccacggagcagcccacggccacggtgaccatcgccgacgtg
gggcagggcgacccgcagcctggcaccgtcaccctggtgtgctccaacccaccctgcgag
acccatgagaccggcaccaccaacactgccacagccaccgtcgtggccaacgtgggcggc
ctaacccagcccgtgcacttcgtgtgcgagggccaggaggctggacagcccaacggtggg
ttagtgcgtgtctgctccaaccccccgtgtgagacgcacgagacggggaccactcacaca
gctaccacggccacatccagcatgggcgccgggcgagtgtgcagcaaccccccatgcgag
acgcacgagacgggcaccacccacacagctaccatggccatgtccaacctgggcgccggg
cgagtgtgcagcaaccccccatgtgagatgcacgagacgggcaccaccaacacggccaca
tctaccatgggcgctggtcgagtgtgcaccaaccccccgtgcgagatgcacgagacgggc
accatcaacactgccaccacggccacatccagcatgggcgctggtcgagtgtgcaccaac
cccccgtgcgagacgcacgagacgggcaccaccaacacggccacatccagcgtgggtgct
gggcgagtgtgcaccaaccccccatgcgagatgcacgagacaggcactaccaacactgcc
accacggccacatgtaatgtggggatgggccaggctgagggggcccagcatgcccctgcc
agcgcgccctgcgagacacagcagaccacagccaccggcaccaccatggcggccagcatg
gggggagctggcaccgagcccccctcttctgccccccaggagacagggggggcagggccc
agccagccccagttgcttcccacaaatccggtccctcgcatctgctccaaccccccctgc
gaaacacacgagacgggcacaacccacacagccactaccgtgacctccagcatgggtgcc
aaccatgaccagccgctgggtactaacgggcaggggcagcccgagggggcacaaggcgag
gccccccccagccccagcagcgtctccaccgtgcagagccgtgccgtgaccaccgtgacg
cagtccacgcctgtgccgggccccgccataccaagcatctcgtcgctggcagagccaccc
gcggaggagccggcgccgcccccccctgcagagccgcccgcgcccccctgtgcggagcca
gcgcagccccagctccccgagcccccggctgagccccccaccccgggccccccgcctggc
cccccgccgcccgcccctgccgcagagccgctggccctgccccaggagctgctggctgag
gggcaggcgggcgccgcgctgctggtcacggggctgacgcccgaggagctggcggtgacg
gccgctgctgaggccgcagctcacgccgcagccgccgagcaggcccacagcctggccctg
caggccgtgctgcaggccgcccaacaggccgtgctgggtgcgggggagcccatggagacg
ggcgaggcgggcacagggccggcggagctgggggcactggggggcgagggtgctgagggg
cagcccacagccatccccatcgtgctgacgccgcaggagctggccgccctggtgcagcag
cagcagcagctgcaggaggcccaggtggcggccgtggcccagcagccccacggcgccccc
ctgcccactgaggccctggcgcccgccgacagcctcaacgacccggccgccgagagcaac
gggctgagcgagctggccagcgctgtcagcagcaccgtcgccctcctgcccgctgcgccc
agcgagggcctggctccgtccaacacattcgtagccccacagcctgtggtggggcccagc
ccagccaagctgcaggcggccgccaccctggccgaggtggccaatggcattgagcctgcc
ccgatgaagccggacccctcggtgcagccccagaagctgctggtgaagaaggaaaaccag
tggttcgacgtgggtgtcatcaaaggcaccaacatgatggtgacccattacttcctgccc
ctcaacgacgcgccccctagtgacgatgactcgggcaccgtccccgactacacgcagctg
aagaaacaggagctgcagccgggcacggcctacaagttccgggtggccgggctgaacgcc
tgcgggcgcggccccttctccgacatctccgccttcaagacctgcctgcccggcttcccg
ggtgcgccctgtgccatcaagatcagcaagagccccgacggggcccacctgacatgggag
ccgccctcggtgacctcggggaagatcgtggagtactcggtgtacctggccatccagagc
acccaggcgggcgagcccaagggcacggcaccagcccagctggccttcatgcgggtctac
tgcgggcccagtccctcgtgcctcgtgcagtcgggcagcctggccaacgcccacatcgac
tacaccaccaagccggctatcatcttccgaatcgccgcccgtaacgagaagggctacggg
cctgccacgcaggtccggtggctgcaagagtccagtaaggacggctccatggccaagccg
gccagcaagcggccgctctcctctcccgacatgaaatctgctccaaagaagccgaaggcc
gacgggcagtga
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