Dermochelys coriacea (leatherback sea turtle): 119847258
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Entry
119847258 CDS
T09064
Symbol
SUPT5H
Name
(RefSeq) transcription elongation factor SPT5 isoform X1
KO
K15172
transcription elongation factor SPT5
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
119847258 (SUPT5H)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dcc03021
]
119847258 (SUPT5H)
03019 Messenger RNA biogenesis [BR:
dcc03019
]
119847258 (SUPT5H)
Transcription machinery [BR:
dcc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
119847258 (SUPT5H)
RNA polymerase I system
119847258 (SUPT5H)
Messenger RNA biogenesis [BR:
dcc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
119847258 (SUPT5H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW
KOW4_SPT5
KOW5_SPT5
KOW2_Spt5
KOW7_SPT5
Spt5-NGN
KOW6_SPT5
KOWx_SPT5
Spt5_N
KOW1_SPT5
GPKOW_C
DUF3912
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
119847258
NCBI-ProteinID:
XP_038237800
LinkDB
All DBs
Position
23:3646326..3674082
Genome browser
AA seq
1081 aa
AA seq
DB search
MSDSEDSNFSEDESERSSEAEEVENEAEEEHASVAGSEKEEVEEEEEEEEEDYDEEEEED
DDDRPPKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKEEIEASNIDNVVLDEDRSG
ARRLQNLWRDQREEELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPGVKDPNLWT
VKCKIGEERATAIALMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEG
VGNLRMGYWNQQMVPIKEMTDVLKVVKEVTNLKPKSWVRLKRGIYKDDIAQVDYVEPSQN
QISLKMIPRIDFDRIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGDVASDGDFLIF
EGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTESTGKEREHNFQ
PGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVI
AGRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQ
LDPQTVGVIVRLERETFQVLNMYGKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVK
VIDGPHSGREGEIRHLFRGFGFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNFTVGG
FAPMSPRISSPMHPSAAGQRGGFGGGGMSRGRGRRDNDLIGQTVRISQGPYKGYIGVVKD
ATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSAYGRTPMYGSQTPMYGSGSRTPM
YGSQTPLHDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRADEEFEYGFDDEPTP
SPQGYGGTPNPQTPGYPDPSSPQVNPPYNPQTPGTPAMYNTDQFSPYAVPSPQGSYQPSP
SPQSYHQVAPSPVGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSPGGYNPH
TPGSGIEQNSSDWVTTDIQVKIRDTYVDSQVVGQTGVIRSVTGGMCSVYLKDSEKVVSIS
SEHLEPVIPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLEEQLKILNLRFLGKLLE
P
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatagtgaagacagcaacttctccgaggatgagagtgagcggagcagcgaggcg
gaggaggtagagaacgaggcagaggaggagcatgccagcgttgcaggcagcgagaaggag
gaggttgaagaggaggaagaggaggaggaagaagactacgatgaggaggaagaggaggac
gatgatgatcggccgccaaagaagcccagacatggagggttcatcttggatgaagccgat
gtggacgatgaatatgaagacgaggaccagtgggaggacggcgccgaggacattctggaa
aaagaagaaattgaagcctccaacattgataatgtggttctggacgaggatcgctctggg
gcccggaggctgcagaacctgtggagggaccagcgcgaggaggagctgggtgaatattac
atgaagaaatacgccaagtcctccgtgggagaaacggtgtacggcggctctgatgagctt
tcggatgacatcacacagcagcagttactgcccggtgtcaaggatcccaacctctggacc
gtgaagtgtaagatcggagaggaacgtgccacagccatagccctgatgaggaaattcatc
gcctaccagttcacagacacacccctgcagatcaagtctgtggtggcccccgagcatgtg
aaaggctacatctatgtcgaggcctacaagcagacccacgtgaagcaggccattgagggc
gtgggcaacctgcggatgggctactggaaccagcagatggtgcccatcaaggagatgaca
gatgtgctgaaggtggtgaaggaggtgaccaacctgaagcccaagtcctgggtccggctc
aagagaggcatttacaaggacgacattgctcaggtggattacgttgagccgagtcagaac
cagatctctctgaagatgatcccgcggatcgattttgaccggatcaaagctcgaatgagc
ctgaaggactggttcgccaagcggaagaagttcaagaggcccccccagcggctgtttgat
gctgaaaagatccggtccttggggggagatgttgcttccgacggtgatttcctcatcttt
gaaggcaatcgttacagtcgcaagggcttcctcttcaagagctttgccatgtcggccgtg
atcacggagggggtgaagcccaccctgtctgagctggagaagtttgaggaccagccggaa
ggcatcgatctggaggtggttaccgaaagcacagggaaggaacgggaacacaacttccaa
cctggcgacaacgtggaggtgtgcgagggggagctgatcaacctgcagggcaagatcctg
agcgtggacggcaacaaaatcaccatcatgcccaagcacgaggatctcaaggacatgctg
gagttcccagctcaggagctgcgtaagtacttcaagatgggagaccacgtcaaggtgatc
gctgggcgcttcgagggcgacacgggactgatcgtgcgggtagaggagaacttcgtcatc
ctcttctcggacctcaccatgcacgagctcaaggtgctgcctcgggacttgcagctctgc
tcagagacggcctccggtgtggacgtgggtgggcagcacgagtggggcgagctggtccag
ctggatccccagaccgtcggggttattgtccgcctggagcgggagaccttccaggtcctg
aacatgtacggcaaagtggtgacggtcaggcatcaggctgtgacgcggaagaaggacaat
cgctttgctgtggccctggactcggagcagaacaatatccacgtcaaggacatcgttaaa
gtcattgatgggccacactcgggtcgcgagggggagatcagacacctcttccgtggcttt
ggattcctgcactgcaagaagctggtggagaacgggggcatgtttgtgtgtaagactcgc
cacttggtgctggctgggggctcgaagccccgggacgtcaccaacttcaccgtcggtggc
tttgcccccatgagtcctcggatcagcagccccatgcaccccagcgcagcaggtcagcga
ggtggctttggcgggggcgggatgagccgaggccgtggacgcagggacaacgacctgata
gggcagacggtgcggatctcccagggaccctacaaaggctacatcggcgtggtgaaggat
gccacggagtccacggcccgcgtggaactccattccacctgccaaaccatctcagtggat
cgccagcgcctcacgacagtgggttcgaggagacctggtggcatgacttccgcctacggc
cgcacccccatgtacggctcacagactcccatgtacggctccggctcccgcacccccatg
tacgggtcgcagactccactgcacgacggcagcaggaccccgcactacggctcccagacg
ccgctgcacgacgggagccggacgcctgcgcagagcggggcttgggaccccaacaacccc
aatacgccctccagggcggatgaggagtttgaatacggcttcgatgacgagcccacgccc
tctccgcaaggctacggggggacccccaacccccagactcccggctaccccgacccttcg
tctccgcaggtcaatccgccatacaatccgcagacgccagggaccccagccatgtacaac
actgatcagttttctccgtacgcagttccatctcctcagggctcctatcagccaagcccc
agccctcagagttaccaccaggtggcgccgagccccgtgggctaccagaacacccactcg
ccagccagttaccacccgaccccgtcgcccatggcgtatcaggccagccccagtcccagc
ccagtgggctacagccccatgacgccaggggctccttctccagggggttacaacccgcac
acccccggctccggcattgagcagaactccagcgactgggtcaccaccgacatccaggtc
aaaattcgagacacctatgtggacagccaggtggtggggcagacgggagtcatccgcagt
gtgacgggcggaatgtgctcagtctacctgaaggacagcgagaaggtggtcagcatttcg
agtgagcacctagagcccgtcataccgaccaaaaacaataaggtgaaggtaatcctgggg
gaggaccgggaggcaacaggcgtcctcttgagcattgacggagaggatggcatcgtccgc
atggacttggaggagcagctcaagatcctcaacttgcgattcctgggcaagctgctggag
ccgtag
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