Dermochelys coriacea (leatherback sea turtle): 119847375
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Entry
119847375 CDS
T09064
Symbol
SYMPK
Name
(RefSeq) symplekin isoform X1
KO
K06100
symplekin
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03015
mRNA surveillance pathway
dcc04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119847375 (SYMPK)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
119847375 (SYMPK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dcc03021
]
119847375 (SYMPK)
03019 Messenger RNA biogenesis [BR:
dcc03019
]
119847375 (SYMPK)
Transcription machinery [BR:
dcc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
119847375 (SYMPK)
Messenger RNA biogenesis [BR:
dcc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
119847375 (SYMPK)
U7-dependent histone pre-mRNA processing factors
119847375 (SYMPK)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
HEAT_MROH2B_C
PDS5
Cnd1
Adaptin_N
Motif
Other DBs
NCBI-GeneID:
119847375
NCBI-ProteinID:
XP_038238078
LinkDB
All DBs
Position
23:complement(5329672..5349358)
Genome browser
AA seq
1363 aa
AA seq
DB search
MTQAALRRAPAQYVPPGPGEDVGREGAARSLELRAPGPGSRSCPLARPALGTDPLAGASS
CSRLGTARAPGARVTMTGRAGEGSNARMSIASQFFTQEEGSGTDSMTTSERVVDLLNQAA
LISNDSKINLLKQVQELIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKRDI
ELLLKLIANLNMLLKDENVNVVKKAILAMTQLYKVALQWMVKSKVINDLQEACWEMVSAM
ASDIILLLDSDNDGIRTHAIKFVEGLIITLSPRMPDSDVPKRHENDISLDRIPKDHPYIK
HNVLWEEGKAALEQLLKFMVHPAISSINLTAALGSLASIARQRPMFMAEVIQAYETLHAN
LPPTLAKSQVSSVRKNLKLHLLSVLKHPSSFEFQAQITTLLVDLGTQQAEITRSMPSLKE
PRKRPRDENDPALKKMKMEPPLGEDDEDKDLEQAAAPPPKPSAQTSTHSDTDITAEFLQP
LLTPDNVANLVLISMVYLPDTMPASFQATYTPVESAGTDAQIKHLARLMATQMTAAGLGP
GSSPRPPGVEHTKLLKEEPKEEKLVKPESVLIKRRLSSLSQGQAISVLGAQGCVTILLEQ
EAPQAKRRPEPIIPATQPRLAGAGGRKKVFRLSDAIKPLTDVQMEKLKLGAVKRILCSER
AVACSGAAQARVKILSSLVTQFDVPLKSEVLAFILDDVRNRLDLAFAWLYQEYNAYLSTF
PTGSLDSYDECLIGLLSGLQEKPDQKDGIFTKVVLEAPLITESALEVIRKYCEDESRTYL
GMSTLRDLIFKRPSRQFQYLHVLLDLSSHEKDKVRQQAILFIKRMYEKDQLREYVEKFAL
NYLQLLVHPNPPSVLFGADKDTEVAAPWTEETVKQCLYLYLALLPQNHKLIHELASVYTE
AIADIKRTVLRVIEQPIRGMGMNSPELLLLVENCPKGAETLVTRCLHSLTDKVPPSPELV
KRVRDLYHKRLPDVRFLIPVLNGLEKKEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGN
SAVSPLNPGELLIALHNIDSAKCDMKSIIKATNLCFGERNVYTSEVLAVVMQQLMEQSPL
PMLLMRTVIQSLTMYPRLGGFVMNVLSRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVIL
QLPPQQLSAVFEKCPELREPLLAHVRSFTPHQQAHVPNSTMAILEASSKQEVEVKDSQPL
EEEELEPAPLLPRMSQDMIALRLAQEKALKRQLEEEQKLKQPASQPRPAHALAPLPAEEP
MDFREEGPEVETPSIFISMQEEEEGSGGDGSLLDSSVEGPLPAKEVKSKEAGASSTTDEG
AESKPESLTPDEPAPSGPQPVSHPEELPEPGGGSAEQEQKAES
NT seq
4092 nt
NT seq
+upstream
nt +downstream
nt
atgacccaggcggccttgcggcgcgcgcctgcgcagtacgtaccgcccgggccgggggaa
gatgtcggccgggagggggccgcgcggagtcttgagctgagagcccctgggccggggagc
cggagctgccctctcgcccgtccggcgctgggcacagaccccttggcgggggcatcgtcc
tgctctcggctgggaacggctcgcgcgccgggtgcccgtgtcaccatgaccggccgcgcg
ggggagggcagcaacgcccgcatgagcatcgcctcccagttcttcacccaggaggagggc
agcggcaccgacagcatgaccacctcggagcgggtggtggatctgttaaaccaagctgcc
ctgatcagcaacgactctaaaatcaacctcctcaaacaggtccaggagctaattataaac
aaggaccccacactgctggataacttcctggatgagatcatcgccttccaggcggacaaa
tccatcgaggtgcggaagtttgtcatcggcttcatagaagaggcctgcaaacgggacatc
gagctgctgctgaagctcatcgccaacctgaacatgctgctaaaggacgagaacgtcaac
gtggtgaagaaggccatcctcgccatgacccagctctacaaggtggcgctgcagtggatg
gtgaagtccaaggtcatcaacgacctgcaggaggcctgctgggaaatggtgtcggccatg
gccagcgacatcatcctgctgctggactcggacaacgacggcatccgcacccacgccatc
aagttcgtggaggggctgatcatcacgctgtcgccccgcatgcccgactcggacgtacct
aagcgccacgagaatgacatcagccttgaccgcatccccaaggaccacccctatatcaaa
cacaatgtgttgtgggaggagggcaaggcggccctggagcagctgctgaagttcatggtg
cacccggccatctccagcatcaacctcacggcggcgttgggctccctggcctccattgcc
cgccagcggcccatgttcatggctgaagtgatccaggcctacgagaccctgcatgccaac
ctgccgccgacactggctaagtcccaggtgagcagcgtgcgcaagaacctgaagctgcat
ctgctgagtgtgctgaagcacccctcgtccttcgagttccaggcgcagatcaccaccctg
ctggtggacctgggcacccagcaggccgagatcacccgcagcatgcccagcctgaaggag
ccgcgcaagcgcccacgggacgagaacgacccagccctgaagaagatgaagatggagcca
cccctcggggaggacgatgaggataaggatctggagcaagcagctgcgccaccacccaag
ccctctgcccagaccagcacccattcggacacggacatcacggccgagttcctgcagccc
ctgctgacgccggacaatgtggccaatctggtgctgatcagcatggtgtacctgcccgac
accatgcccgcctccttccaagccacctacacccccgtggagtcggccggcacagacgcc
cagatcaagcatctcgcccgcctgatggccacccagatgacggctgcagggcttgggcca
ggctcctctccccgtcccccaggcgtggaacacaccaagctgctgaaggaggagccgaag
gaggagaagctggtgaagcccgagagcgtgctgatcaaacggcgcctgtcctcgctatct
caggggcaggccatctccgtgctgggggcgcagggctgcgtcaccatcctcctggagcaa
gaggccccccaggccaagcggcgcccggagcccatcatcccggccacccagcccaggctg
gcaggcgctggcgggcgcaagaaggttttccgcctgagcgacgcgatcaagccgctgacg
gacgtgcagatggagaagctgaagctgggagccgtgaagcggatcctgtgctcggagaga
gccgtcgcttgcagtggggcagcccaggcccgtgtcaagatcctctcgtccctggtgacc
cagtttgacgtgcccctgaagagcgaggtcttggccttcatcctggacgacgtccgcaac
cggctggacctggccttcgcctggctgtaccaggagtacaatgcctacctgagcacgttc
cccactggctccctggacagctacgatgagtgcctcattggtctgctctccggcctgcag
gagaagccagaccagaaggatgggatcttcaccaaggtggtgctggaagccccactcatc
acagagagcgccctggaggtgatccgcaagtactgcgaggatgagagccgaacctacctg
gggatgtccaccctccgggacctgatcttcaagcgcccgtccaggcagttccagtatctg
cacgtgctgctggacctcagctcccatgagaaggacaaggtccgccagcaggcgatcctc
ttcatcaagcgcatgtatgagaaggaccagctgcgggagtacgtggagaagtttgcactg
aactacctacagctcctggtgcaccccaaccccccatctgtgctcttcggcgctgacaag
gacacggaggtggctgctccctggaccgaggagaccgtcaagcagtgtctgtacctgtac
ctggccctgctgccgcagaaccacaagctgatccacgagctggcgtcggtctacacagag
gccatcgctgacatcaagcgcaccgtgctgcgggtcatcgagcagccgatccgcgggatg
gggatgaactccccggagctgctgctgctggtggagaactgccccaaaggggccgagacc
ctggtgacccgctgcctgcacagcctgacagataaagtgcccccatctcccgagctggtg
aagcgagttcgtgatctctaccacaagcggctcccggacgtccggttcctcatccccgtc
ctcaacgggctggagaagaaagaggtgatccaggctctgcccaagctcatcaagctgaac
cccatcgtggtgaaggaggtgttcaaccgcctcttggggacgcagcacggcgaagggaat
tcggccgtgtcccccctgaaccctggggagctgctcattgccttgcacaacatcgactcc
gccaagtgcgacatgaaatccatcatcaaagccaccaacctgtgtttcggcgagaggaac
gtctacacgtcggaggtgctggccgtggtgatgcagcagctgatggagcagagccccctg
cccatgctgcttatgaggacggtcatccagtcgctgaccatgtacccacgcctgggcggc
ttcgtcatgaacgtcctgtcccgcctcatcatgaagcaggtgtggaagtaccccaaagtg
tgggagggcttcatcaaatgctgccagcgcaccaagccccagtccttccaggtcatcctg
cagctccctccgcagcagctcagcgccgtctttgagaagtgccccgagctgcgggagccc
ctgctggcccatgtccgctccttcactccgcaccagcaagcgcatgtccccaactccacc
atggccatcctggaagccagcagcaagcaggaggtggaggtgaaggactcgcagccgctg
gaggaggaggagctggaacccgcgcccctcctcccacgtatgtcccaggacatgatcgct
ctgcggctggcccaggagaaggcactcaaacgccagctggaggaggagcagaaactgaag
cagccagccagccagccgcgccctgcccatgccctggcaccactgcctgctgaggagccc
atggacttccgggaggaggggcccgaggtggagacgccctccatcttcattagcatgcag
gaggaagaggagggttcaggcggagatgggtccctgttggactccagcgtggaggggccc
ctacctgcgaaggaagtgaagagcaaggaggcgggagccagcagcaccactgacgaggga
gcggagagcaagcccgagagcctcacgccggatgagccggcacccagcgggccccagccg
gtcagccaccctgaggagctgccagagcccgggggtggcagcgcagagcaggagcagaaa
gcagagagctga
DBGET
integrated database retrieval system
