KEGG   Dermochelys coriacea (leatherback sea turtle): 119848240
Entry
119848240         CDS       T09064                                 
Symbol
KDM4B
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
dcc  Dermochelys coriacea (leatherback sea turtle)
Brite
KEGG Orthology (KO) [BR:dcc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dcc03036]
    119848240 (KDM4B)
Enzymes [BR:dcc01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     119848240 (KDM4B)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     119848240 (KDM4B)
Chromosome and associated proteins [BR:dcc03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    119848240 (KDM4B)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD SLX1_C DUF7141
Other DBs
NCBI-GeneID: 119848240
NCBI-ProteinID: XP_038239699
LinkDB
Position
25:8732716..8957566
AA seq 1118 aa
MGSENPSPQNPGCKIMTFRPTLEEFRDFGKYVAYIESQGAHRAGLAKVIPPKEWKPRKTY
DDIDDMVIPAPIQQVVTGQSGLFTQYNIQKKPMTVGEYRRLANSEKYCTPRHQDFEDLER
KYWKNLTFVSPIYGADISGSLYDADVEEWNIGNLNTLLDMVEHECGIIIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAKGFFPGSSQGCDAFLR
HKMTLISPSILKKYGIPFDRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDY
GKMATQCTCRKDMVKISMDVFVRVLQPERYDLWKQGKDGAILDHMKPTALTSPELEAWNE
TKPELKAKLLRRMGDEEEDNKQNYRSHRKRSQPRRHKTEDQKSLGEVIAMETALEEVKMK
EELKRGPDLDEEERSKVTEGGEGDSKVKGRPPKVKGERKKKHPHHHHHHSHHLQPPQPPL
QQQLLPLPPPQPQQQPAEEEAPAARPRIPAAAPATAEKSLPTAPLNIVLPSEVPSEEDDF
KPRPIIPMLYVVPRTKKVVFEKERISCQQAFEQFATQKGQVWREQVVPLELTVKEEESRE
AENADVATEVSDLQATSAFSKMKMEIKKSRRHPLGKPPTRSPLSVVKQEASSDEETFPFS
GEEDVSDPEALKSLLSLQWKNKAHNFPAERKFNAAAALSEPFCAVCTLFYPYNQSLQMDK
ESVQVSTGESSSLLQLSKCGQKTKPLIPEMCFTSGGENTEPLPSNSYIGEDGTSLLISCA
KCCLQVHASCYGIRPDLVNEGWSCSRCSANAWAADCCLCNLRGGALQMTTDGRWIHIICA
IAVPEARFLNVIERHPVDISAIPEQRWKLKCVYCRKRMKKVSGACIQCSYEHCSTSFHVT
CAHAAGVPMEPDDWPYVVSITCFKHKAANHNIQLRREISLGQTVITKNRNGLYYRCKVIG
MTTQTFYEVNFDDGSYSDNVYPESITSRDCIQMGPPPEGELVQLQWTDGIIYKAKFIAAQ
ISQIYQVEFEDGSQLMVKRGDIYTLEEELPKRVKSRLSLSTGAPQEGVFSGDEVKAAKRP
RVGNSRNPEDYGQNPDYLAFMETLLQTQYQPGPQSNIF
NT seq 3357 nt   +upstreamnt  +downstreamnt
atggggtctgaaaacccaagtccacagaaccctggctgtaagatcatgaccttccgtccc
accctagaggagtttcgggactttgggaaatacgttgcctacatcgaatcacagggagct
catagggcagggcttgccaaggtgattcctcccaaggaatggaagccccgaaagacttac
gatgacatcgatgatatggtcatcccagcgcctatccagcaggtggtgactgggcagtcg
gggttattcacccagtataatatacagaagaaacccatgacggtgggagagtaccggcgt
ctggccaacagtgagaagtactgtactcctcgccaccaagattttgaagacctggaacgc
aaatactggaagaatctgacgttcgtctcaccaatttatggggcagatatcagtggctca
ctatatgatgcagacgtagaagaatggaatattgggaatctgaacaccctgttggacatg
gtggagcatgagtgtgggattatcatagaaggtgtgaacaccccctacctttattttggc
atgtggaaaacaacatttgcatggcatactgaggacatggatctctacagcatcaactac
ctgcattttggggagccgaaatcctggtatgccataccaccagagcatggcaagcgattg
gaacgcctggcaaaaggatttttcccaggaagctctcagggatgtgatgccttccttcgc
cacaagatgaccctcatttcaccctccatcttgaagaaatatggcatcccgtttgaccgg
atcacccaagaggctggagagtttatgatcacgtttccttacggctaccacgcgggattc
aaccacggcttcaactgcgctgagtccaccaactttgccacactgcggtggattgactat
ggcaaaatggctacgcaatgcacgtgccgcaaagacatggtgaagatttccatggatgtt
ttcgtgagggttctacaaccggaacgttatgacttgtggaaacaagggaaagatggtgct
attctggaccacatgaaacccacagctctgaccagcccagagctggaagcctggaatgag
acaaagcctgagctgaaagctaagctgctccgcaggatgggagatgaagaagaggacaac
aaacaaaattaccggtctcacagaaaaagaagtcaacccagaaggcataaaacagaggat
cagaagtctcttggggaagtcatagctatggagactgccctggaagaagtcaaaatgaag
gaggagctgaaaagagggccagacctagatgaagaggagagaagtaaagtgaccgagggg
ggagaaggagacagcaaggtgaagggccgtcccccaaaagtcaaaggtgagagaaagaag
aagcaccctcaccatcatcaccatcacagtcatcacctgcagccacctcagcctcctttg
cagcagcagctgctgccactgccgcctccacagccacagcagcaaccagcagaggaagag
gcaccggcagcacggccgcggattcctgcagcagcaccagccacggcagagaagagctta
cccactgctcccctcaatatcgtcctgccctcagaggtgccaagcgaggaggatgacttt
aagccccgccccatcattcccatgctttatgtggttccacggaccaaaaaggtggtcttt
gaaaaggagcgcatatcctgccagcaggcctttgagcagtttgccacgcaaaaaggccag
gtttggcgggagcaggtggtccctttggagctcactgtgaaggaggaggagagcagagaa
gcagaaaatgcggatgttgccactgaggtcagtgacttacaggccacttctgctttttca
aaaatgaagatggagataaagaaaagtcgccgtcacccactgggcaagccaccaacccgc
tccccattgtctgtggttaaacaggaggcctcaagtgatgaggaaacgtttccattttcc
ggggaggaggatgtgagtgacccagaggctttgaagtctttactttccctgcagtggaag
aataaagcgcataacttcccagctgagcgaaaattcaatgcagctgctgccctgagtgag
cccttctgtgctgtctgtaccctcttctacccttataaccagtccttacagatggataaa
gagtctgtccaggtctccacaggggagagctcctccttgctccagctttctaagtgtgga
cagaagacaaagcctctgatccctgagatgtgctttacctcaggtggtgaaaacacagag
ccccttccttcaaactcatacattggagaagatggaaccagcctcctgatatcctgcgcc
aagtgctgcctgcaggttcatgctagttgctatggaatacgtcctgatctggtgaatgaa
ggctggtcttgttcacggtgctcagccaatgcatgggcagcggactgctgcctgtgtaat
ctcaggggaggagctcttcaaatgaccactgatggaaggtggatccatataatctgtgct
attgctgtcccagaggcccgtttcctcaacgtaatagagcgccatcctgtggacatcagt
gctattccagagcagcggtggaaactgaaatgtgtgtattgccggaaacggatgaagaag
gtgtctggtgcctgcattcaatgctcctacgagcactgctccacttccttccatgtgacc
tgtgcacatgccgctggggtacccatggagccggatgattggccatatgttgtgtccatc
acttgcttcaaacataaagcagccaaccacaatatccagttgcggagggagatatcgctg
gggcagactgtgattacaaagaaccgcaatggactctactacaggtgtaaagtaattggc
atgacaacgcaaaccttctatgaagtgaactttgacgatggctcttacagcgacaacgtt
tacccggaaagcattactagcagagactgcattcagatgggaccccctccagaaggcgag
ttggttcagctgcagtggactgatggaatcatctataaggccaagttcattgcagcccag
atcagtcagatttatcaggtagagtttgaagatggctcccagctgatggtaaaacgtggt
gatatttacacattggaggaggagcttcctaagagagtgaaatctcgcctgtccctcagc
actggggcccctcaggaaggagtgttttccggagacgaagtgaaagccgccaagcgcccc
cgagtggggaattccaggaatcctgaggactatggacagaacccagattatttggccttc
atggagaccctgctgcagacgcagtaccaaccaggaccacagagcaacatcttttaa

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